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Far more Vibrio pathogens than we knew

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Vibrio pathogens far more common in reef tanks than previously known

We’ve collected data on bacterial communities from thousands of saltwater aquaria, and nearly all of them included some members of the family Vibrionaceae. This group has always been of special interest for aquarists because it includes multiple known pathogens of fish, corals, and other animals. And since even non-pathogenic Vibrio are associated with the surfaces of corals and other Cnidarians, this group is often found at relatively high levels in reef tanks.

But the previous data were based on 16s sequencing, and this marker turns out to have limited power for resolving the Vibrio types we found in reef tanks. We’ve previously discussed these, including the fish pathogens Vibrio fortis and Photobacterium damselae, both of which are common in our samples.

But aside from these, most of the types found in reef tanks could not be resolved to the species level using this marker. In other words, we were able to measure their levels and identify them as member of the genus Vibrio, but couldn’t resolve which species of Vibrio. They were left in the report as “Vibrio sp.”

This was an unfortunate gap, because some Vibrio are harmless members of the reef community and others are among the best-known pathogens associated with coral or fish diseases. Happily, we’ve recently released an upgraded version of the test that includes a marker providing species-level resolution for Vibrio. You can read more about the test here.

In this article I’ll describe what we’ve learned from studying Vibrio communities in reef tanks with this new approach.

A new look at the Vibrio community in reef tanks

Based on the data we’ve collected using this new approach from over 100 tanks (n=114), we can present a general description of the Vibrio community in reef tanks at the species level.

As expected, we found Vibrio in the majority of samples tested (>60%) using the new approach. Most of these had just a few types, but a few were exceptionally diverse with over 10 different species. (Figure 1)

Vibrio pathogens of fish

Some of the most common are known pathogens of fish. We’ve previously reported that V. fortis is common in reef tanks based on 16s data from the original microbiome test. Our new test reaches a similar conclusion for this fish pathogen, with V. fortis detected in 22% of samples tested so far with the new test. To our knowledge this pathogen has only been directly associated with disease in seahorses and their relatives, but laboratory challenge experiments show a wider range of potential hosts.

More interestingly the new test reveals several fish pathogens that couldn’t be resolved with the previous technology.

Vibrio pathogens of corals

Other Vibrio species in reef tanks

The bottom line: our Microbiome Test provides an unprecedented level of detail on the microbial community in your tank, including both beneficial microbes that are crucial to the success of a reef tank, and harmful pathogens that can kill fish or corals. 

Seen enough? Click here to order your sampling kit today and find out whats growing in your tank!

© Aquabiomics LLC, 2023 | About us | Contact us | FAQ

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Introducing Microbiome 2.0

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Introducing Microbiome 2.0

About 6 years ago we introduced our original Microbiome Test for aquariums. For the first time, this allowed reef keepers to identify specific bacteria growing in their tanks. 

Today we’re introducing an upgraded version of the test thats providing important new insights into previously unidentifiable Vibrio pathogens in reef tanks. 

In this article I’ll describe how the technology works, what we’re learning from the new test, and how we’re handling the transition from the original to the upgraded version.

How it works

To classify microbes with DNA sequencing, we read the DNA bases (A,C,G, or T) in a specific part of the genome – like reading a single page from every book on a shelf to identify which books you have.

The original microbiome test focuses on a ribosomal gene called 16s. We use this region because its widely used by environmental microbiologists studying coral reefs, and they had a number of good reasons for using it. Features of the DNA sequence in this region makes it “universal” – it can be used to detect and sequence DNA from bacteria of any kind. This allows us to study the whole community at once, a powerful benefit that has revolutionized our understanding of microbial communities from coral reefs to humans to terrestrial soils to the human gut.

But this benefit comes with a tradeoff: some groups cannot be identified to the species level using this approach. In many cases its useful enough to know the genus, but in others its important to identify bacteria to the species level.

In reef aquariums, 16s sequencing finds bacteria from the Vibrio genus in most tanks. And a few of these can be identified to the species level. But unfortunately most of the ones in reef tanks turn out to be impossible to tell apart using just this marker.

Since sequencing the 16s marker can’t tell these apart, we turned to a different marker developed by scientists studying Vibrio in oyster diseases. This marker has the opposite tradeoffs of 16s – its not universal at all, only capturing DNA from Vibrio and a few other groups. But it provides species-level resolution within the Vibrio genus.

So for our new Microbiome 2.0 Test we use both markers. Effectively this doubles the work on our end, but its clearly worth it. You get the best of both worlds – a broad description of all groups down to at least the genus level, and a deep dive into the important Vibrio group with species-level resolution. 

(The reader may already be thinking, what about other groups? Can you use a similar approach for other important pathogen groups? Absolutely – in fact we’re putting the finishing touches on a similar test for Mycobacterium sp. that we’ll be releasing as a free upgrade sometime in 2026). 

Each section in the report includes a diagnosis of your sample, with a link to suggestions for correcting any deficiencies we find.

The bottom line: our Microbiome Test provides an unprecedented level of detail on the microbial community in your tank, including both beneficial microbes that are crucial to the success of a reef tank, and harmful pathogens that can kill fish or corals. 

Seen enough? Click here to order your sampling kit today and find out whats growing in your tank!

© Aquabiomics LLC, 2023 | About us | Contact us | FAQ

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Certificate of Analysis LRS G6.1

Certificate of Analysis: Live Reef Sand, Batch LRS G6.1

lrs.g6.1_Certificate_of_Analysis

    Certificate of Analysis


About this report

This report summarizes the results from DNA analysis of the community growing in a batch of Live Reef Sand. Universal genetic markers were amplified from microbial (prokaryotic) and other (eukaryotic) DNA in the sample, and thousands of individual DNA molecules from this mixture were sequenced. Each sequence was then compared with public DNA databases to identify its origin. This report summarizes the kinds of organisms detected in the sample, with a focus on beneficial microbes, pathogens, and parasites.

Information about this sample
Sample ID lrs.g6.1
Batch Name G04-01-2025
Sample Date Apr 21, 2025 9:00 AM

Microbial Diversity

This sample contained DNA from 1512 different types of microbes.


This pie chart shows the diversity of each microbial family found in the sample. The size of each slice is proportional to the number of different types (labels on each slice). For clarity, only families with 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Nitrifying Community

Ammonia-Oxidizing Microbes

Nitrosomonadaceae
Type Percent of Community Genus Species
2503 0.02 Unknown Unknown
Cenarchaeaceae
Type Percent of Community Genus Species
73 3.15 Nitrosopumilus Unknown
2996 1.21 Nitrosopumilus Unknown
640 1.03 Nitrosopumilus Unknown
760 0.69 Nitrosopumilus Unknown
108975 0.24 Nitrosopumilus Unknown
10730 0.18 Unknown Unknown
248126 0.14 Unknown Unknown
3535 0.13 Cenarchaeum symbiosum
14133 0.13 Nitrosopumilus Unknown
265380 0.12 Unknown Unknown
17286 0.11 Nitrosopumilus Unknown
14172 0.10 Nitrosopumilus Unknown
9676 0.08 Nitrosopumilus Unknown
74695 0.07 Cenarchaeum symbiosum
265527 0.07 Nitrosopumilus Unknown
265661 0.05 Nitrosopumilus Unknown
132595 0.04 Unknown Unknown
70967 0.02 Nitrosopumilus Unknown
31900 0.01 Nitrosopumilus Unknown

Nitrite-Oxidizing Bacteria

Nitrospiraceae
Type Percent of Community Genus Species
10233 0.21 Unknown Unknown
55497 0.09 Unknown Unknown
25185 0.07 Unknown Unknown
266800 0.02 Unknown Unknown
The nitrifying community in this sample included 24 different types of microbes.

Bacterial Pathogens

None found.

Complete list of pathogens we screened for:

Eubacterium tarantellae, Lactococcus garvieae, Enterococcus seriolicida, Streptococcus parauberis, Streptococcus iniae, Mycobacterium chelonei, Mycobacterium fortuitum, Mycobacterium marinum, Mycobacterium neoaurum, Nocardia asteroides, Nocardia salmonicida, Nocardia seriolae, Renibacterium salmoninarum, Aeromonas jandaei, Aeromonas salmonicida, Serratia liquefaciens, Chryseobacterium balustinum, Chryseobacterium scophthalmum, Tenacibaculum maritimus, Tenacibaculum ovolyticus, Pasteurella skyensis, Pseudomonas anguilliseptica, Moritella marina, Moritella viscosa, Photobacterium damselae, Shewanella putrefaciens, Vibrio alginolyticus, Vibrio cholerae, Vibrio fischeri, Vibrio furnissii, Vibrio harveyi, Vibrio carchariae, Vibrio trachuri, Vibrio ichthyoenteri, Vibrio logei, Vibrio ordalii, Vibrio pelagius, Vibrio salmonicida, Vibrio splendidus, Halomonas cupida, Piscirickettsia salmonis, Vibrio shiloi, Vibrio coralliilyticus, Vibrio harveyi, Aurantimonas coralicida, Vibrio rotiferianus, Vibrio alginolyticus, Vibrio proteolyticus, Vibrio charcharvina, Serratia marscesens, Aquarickettsia rohweri

Eukaryotic Biodiversity

This sample contained DNA from 5077 different Eukaryotic sources.


This pie chart shows the diversity of each Eukaryotic Phylum detected in the sample. The size of each slice is proportional to the number of different types from each phylum. For clarity, only families with 3 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Parasites

None of the DNA sequences from this sample matched known parasites.
Group Description Percent of eDNA
Amyloodinium Dinoflagellate parasites responsible for the fish disease Marine Velvet 0
Cryptocaryon Ciliate parasites responsible for the fish disease Ich 0
Brooklynella Ciliate parasites responsible for the fish disease Brook 0
Uronema Ciliate parasites responsible for a fish disease called by the same name 0
Phestilla Montipora-eating Nudibranchs 0
Amakusaplana Acropora-eating Flatworms 0
Ancyrocephalidae Flatworms often called Flukes that parasitize fish 0
Gyrodactylidae Flatworms often called Flukes that parasitize fish 0
Capsalidae Flatworms often called Flukes that parasitize fish 0
Turbonilla Snails in the family Pyramidellidae that parasitize giant clams 0
Trichodina A ciliated protozoan parasite of fish 0

Other Animal Pests

None of the DNA sequences from this sample matched known animal pests.
Group Description Percent of eDNA
Aiptasia The glass anemone, a ubiquitous pest 0
Thylacodes Vermetid snails 0
Asterina A group of sea stars that includes coral predators 0

Complete list of Eukaryotes identified

This list includes all Eukaryotes (Animals, Protists, and anything else besides Bacteria or Archaea) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Neodexiospira steueri (Annelida), Novafabricia sp. (Annelida), Protula sp. (Annelida), Spirorbis spirorbis (Annelida), Pileolaria sp. (Annelida), Dasybranchus caducus (Annelida), Notomastus latericeus (Annelida), Coquimba ishizakii (Arthropoda), Bythoceratina hanejiensis (Arthropoda), Caudites asiaticus (Arthropoda), Robustaurila salebrosa (Arthropoda), Kotoracythere inconspicua (Arthropoda), Pistocythereis bradyformis (Arthropoda), Howeina sp. (Arthropoda), Psammocythere oviformis (Arthropoda), Metacypris digitiformis (Arthropoda), Oliarus slossonae (Arthropoda), Humulus lupulus (Ascomycota), Aspergillus penicillioides (Ascomycota), Saccharomyces uvarum (Ascomycota), Cladosporium sp. (Ascomycota), Postia placenta (Basidiomycota), Wallemia sebi (Basidiomycota), Malassezia restricta (Basidiomycota), Hyphodontia subalutacea (Basidiomycota), Psathyrella candolleana (Basidiomycota), Golubevia pallescens (Basidiomycota), Marchandiobasidium aurantiacum (Basidiomycota), Phlebia radiata (Basidiomycota), uncultured Auriculariaceae 417147 (Basidiomycota), uncultured eukaryote 417154 (Basidiomycota), Amylocystis lapponica (Basidiomycota), Mrakia frigida (Basidiomycota), Trametes versicolor (Basidiomycota), uncultured fungus 417160 (Basidiomycota), Hygrophoropsis aurantiaca (Basidiomycota), metagenome (Centrohelida), uncultured marine 403572 (Centrohelida), uncultured marine 3673 (Centrohelida), uncultured marine 409314 (Centrohelida), uncultured marine 409316 (Centrohelida), uncultured eukaryote 409334 (Centrohelida), uncultured marine 417212 (Centrohelida), uncultured marine 15485 (Cercozoa), Paradinium poucheti (Cercozoa), Haplosporidian parasite (Cercozoa), Gromia oviformis (Cercozoa), uncultured Cercozoa 1180 (Cercozoa), Cyphoderia cf. (Cercozoa), Chlorarachniophyceae sp. (Cercozoa), uncultured eukaryote 403403 (Cercozoa), Ventrifissura sp. (Cercozoa), Nuclearia-like filose (Cercozoa), Protaspis grandis (Cercozoa), uncultured eukaryote 2529 (Cercozoa), uncultured Oxytrichidae 403689 (Cercozoa), uncultured marine 317051 (Cercozoa), Cryothecomonas aestivalis (Cercozoa), uncultured eukaryote 5405 (Cercozoa), Gymnophrys sp. (Cercozoa), Vampyrellida sp. (Cercozoa), metagenome (Cercozoa), Reckertia gemma (Cercozoa), uncultured eukaryote 61546 (Cercozoa), Eocercomonas perecta (Cercozoa), Esquamula lacrimiformis (Cercozoa), uncultured Cercozoa 327008 (Cercozoa), uncultured marine 405853 (Cercozoa), uncultured marine 405854 (Cercozoa), Protaspis sp. (Cercozoa), marine metagenome (Cercozoa), uncultured eukaryote 331973 (Cercozoa), uncultured marine 407852 (Cercozoa), uncultured marine 407854 (Cercozoa), Micrometopion nutans (Cercozoa), uncultured Oxytrichidae 409193 (Cercozoa), uncultured eukaryote 409905 (Cercozoa), uncultured eukaryote 409911 (Cercozoa), uncultured cercomonad 409966 (Cercozoa), uncultured eukaryote 410071 (Cercozoa), uncultured eukaryote 410210 (Cercozoa), Athalamea environmental (Cercozoa), uncultured eukaryote 410561 (Cercozoa), Metopion fluens (Cercozoa), uncultured freshwater 410813 (Cercozoa), uncultured Cercozoa 332127 (Cercozoa), uncultured marine 405866 (Cercozoa), uncultured marine 416993 (Cercozoa), uncultured marine 417046 (Cercozoa), uncultured Cercozoa 417187 (Cercozoa), uncultured marine 417191 (Cercozoa), uncultured Cercozoa 417195 (Cercozoa), uncultured marine 417262 (Cercozoa), uncultured marine 417269 (Cercozoa), uncultured marine 417271 (Cercozoa), uncultured marine 417454 (Cercozoa), uncultured fungus 405828 (Chytridiomycota), Olpidium brassicae (Chytridiomycota), Harpochytrium sp. (Chytridiomycota), uncultured eukaryote 2287 (Ciliophora), Diophrys parappendiculata (Ciliophora), Loxophyllum perihoplophorum (Ciliophora), Euplotes sinicus (Ciliophora), Vaginicola sp. (Ciliophora), Amphileptus litonotiformis (Ciliophora), uncultured eukaryote 402703 (Ciliophora), Diophrys apoligothrix (Ciliophora), Protocruzia adherens (Ciliophora), Protogastrostyla sterkii (Ciliophora), Hemigastrostyla enigmatica (Ciliophora), metagenome (Ciliophora), Philaster sinensis (Ciliophora), Spirotrachelostyla tani (Ciliophora), Amphisiella sinica (Ciliophora), Uroleptus pisces (Ciliophora), uncultured eukaryote 258679 (Ciliophora), uncultured alveolate 60809 (Ciliophora), uncultured ciliate 403166 (Ciliophora), Folliculina WWS-2008 (Ciliophora), uncultured eukaryote 201 (Ciliophora), Paratetrahymena sp. (Ciliophora), uncultured alveolate 403255 (Ciliophora), Miamiensis avidus (Ciliophora), Lacrymaria sp. (Ciliophora), Pseudoamphisiella quadrinucleata (Ciliophora), Placus striatus (Ciliophora), uncultured eukaryote 404328 (Ciliophora), uncultured eukaryote 766 (Ciliophora), Protogastrostyla pulchra (Ciliophora), Amphileptus spiculatus (Ciliophora), Cothurnia salina (Ciliophora), Hemigastrostyla sp. (Ciliophora), uncultured alveolate 33232 (Ciliophora), uncultured eukaryote 404994 (Ciliophora), Loxophyllum utriculariae (Ciliophora), uncultured eukaryote 406182 (Ciliophora), Glauconema trihymene (Ciliophora), uncultured eukaryote 406329 (Ciliophora), uncultured eukaryote 406330 (Ciliophora), Entorhipidium tenue (Ciliophora), uncultured Oxytrichidae 407821 (Ciliophora), uncultured eukaryote 407823 (Ciliophora), Gymnodinioides sp. (Ciliophora), uncultured ciliate 408874 (Ciliophora), Dexiotricha cf. (Ciliophora), uncultured eukaryote 409091 (Ciliophora), Urosoma salmastra (Ciliophora), uncultured eukaryote 409197 (Ciliophora), uncultured eukaryote 409203 (Ciliophora), Neourostylopsis orientalis (Ciliophora), Monocoronella carnea (Ciliophora), Amphisiella annulata (Ciliophora), uncultured eukaryote 409551 (Ciliophora), uncultured eukaryote 410200 (Ciliophora), uncultured eukaryote 410314 (Ciliophora), Amphisiella candida (Ciliophora), uncultured alveolate 416988 (Ciliophora), Stichotrichia sp. (Ciliophora), uncultured Eimeriidae 417345 (Ciliophora), Stylophora pistillata (Cnidaria), Aglauropsis aeora (Cnidaria), Acropora aspera (Cnidaria), Leptoria phrygia (Cnidaria), Acropora tortuosa (Cnidaria), Haliclystus sp. (Cnidaria), Atolla vanhoeffeni (Cnidaria), Tiaricodon coeruleus (Cnidaria), Eudendrium caraiuru (Cnidaria), Hydractinia sp. (Cnidaria), Laomedea calceolifera (Cnidaria), Mycetophyllia daniana (Cnidaria), Phyllangia mouchezii (Cnidaria), Stephanoscyphus sp. (Cnidaria), Calvadosia cruciformis (Cnidaria), Koellikerina fasciculata (Cnidaria), Millepora sp. (Cnidaria), Turritopsis nutricula (Cnidaria), Stylaster cf. (Cnidaria), uncultured eukaryote 410277 (Cnidaria), Eudendrium racemosum (Cnidaria), Odessia maeotica (Cnidaria), Podocoryna exigua (Cnidaria), Acropora lutkeni (Cnidaria), Gonothyraea loveni (Cnidaria), uncultured Chytridiomycota 267780 (Cryptomycota), uncultured Chytridiomycota 405300 (Cryptomycota), uncultured Chytridiomycota 325594 (Cryptomycota), uncultured Chytridiomycota 410011 (Cryptomycota), uncultured Chytridiomycota 410018 (Cryptomycota), uncultured eukaryote 417166 (Cryptomycota), uncultured Chytridiomycota 417204 (Cryptomycota), Navicula arenaria (Diatomea), Nitzschia cf. (Diatomea), Tryblionella apiculata (Diatomea), uncultured eukaryote 6222 (Diatomea), Psammodictyon constrictum (Diatomea), uncultured eukaryote 402670 (Diatomea), Protokeelia bassonii (Diatomea), uncultured eukaryote 402676 (Diatomea), uncultured marine 305339 (Diatomea), Haslea spicula (Diatomea), uncultured marine 6590 (Diatomea), uncultured eukaryote 198850 (Diatomea), Rhaphoneis sp. (Diatomea), uncultured marine 402767 (Diatomea), uncultured marine 141668 (Diatomea), uncultured eukaryote 402714 (Diatomea), Amphora laevis (Diatomea), Craticula pseudocitrus (Diatomea), uncultured marine 186955 (Diatomea), uncultured stramenopile 402824 (Diatomea), uncultured eukaryote 52878 (Diatomea), uncultured marine 60591 (Diatomea), Bacillariophyta sp. (Diatomea), Amphora sp. (Diatomea), Amphora coffeiformis (Diatomea), Craticula molestiformis (Diatomea), Nitzschia sigma (Diatomea), Pseudogomphonema sp. (Diatomea), Pleurosigma sp. (Diatomea), Nitzschia longissima (Diatomea), Navicula vara (Diatomea), Hippodonta capitata (Diatomea), uncultured marine 267941 (Diatomea), uncultured eukaryote 152348 (Diatomea), uncultured stramenopile 402770 (Diatomea), uncultured marine 402712 (Diatomea), uncultured eukaryote 325512 (Diatomea), uncultured marine 402865 (Diatomea), uncultured eukaryote 402881 (Diatomea), Sellaphora sp. (Diatomea), Cylindrotheca fusiformis (Diatomea), uncultured stramenopile 53569 (Diatomea), Biddulphia tridens (Diatomea), uncultured eukaryote 402957 (Diatomea), uncultured eukaryote 403329 (Diatomea), uncultured marine 403331 (Diatomea), uncultured eukaryote 402976 (Diatomea), uncultured eukaryote 141758 (Diatomea), Tursiocola cf. (Diatomea), uncultured marine 129510 (Diatomea), uncultured eukaryote 403475 (Diatomea), uncultured marine 152470 (Diatomea), Amphora cf. (Diatomea), Thalassiosira hendeyi (Diatomea), uncultured marine 402720 (Diatomea), uncultured marine 403095 (Diatomea), uncultured marine 403582 (Diatomea), uncultured stramenopile 152522 (Diatomea), uncultured eukaryote 326284 (Diatomea), uncultured stramenopile 326526 (Diatomea), Nitzschia sp. (Diatomea), Papiliocellulus elegans (Diatomea), Pseudo-nitzschia pungens (Diatomea), Caloneis sp. (Diatomea), uncultured marine 403201 (Diatomea), Cocconeis pediculus (Diatomea), uncultured marine 402901 (Diatomea), uncultured stramenopile 403856 (Diatomea), Thalassiosira concaviuscula (Diatomea), uncultured marine 403859 (Diatomea), uncultured marine 403861 (Diatomea), Paralia sulcata (Diatomea), uncultured eukaryote 403851 (Diatomea), Navicula veneta (Diatomea), uncultured eukaryote 403371 (Diatomea), uncultured marine 403374 (Diatomea), uncultured eukaryote 404055 (Diatomea), uncultured eukaryote 404057 (Diatomea), uncultured eukaryote 404058 (Diatomea), uncultured marine 404065 (Diatomea), Stauroneis kriegeri (Diatomea), Epithemia sorex (Diatomea), uncultured marine 403444 (Diatomea), uncultured eukaryote 403476 (Diatomea), uncultured eukaryote 267631 (Diatomea), Halamphora costata (Diatomea), uncultured eukaryote 403853 (Diatomea), uncultured eukaryote 404317 (Diatomea), Attheya longicornis (Diatomea), uncultured marine 404322 (Diatomea), uncultured stramenopile 404325 (Diatomea), uncultured marine 404330 (Diatomea), Catenulaceae sp. (Diatomea), uncultured marine 308694 (Diatomea), Haslea ostrearia (Diatomea), uncultured marine 62115 (Diatomea), uncultured eukaryote 206444 (Diatomea), uncultured stramenopile 325098 (Diatomea), uncultured stramenopile 403868 (Diatomea), uncultured marine 404059 (Diatomea), uncultured marine 404685 (Diatomea), uncultured marine 404686 (Diatomea), uncultured eukaryote 345551 (Diatomea), Bacillaria paxillifer (Diatomea), uncultured marine 267587 (Diatomea), uncultured marine 328147 (Diatomea), uncultured marine 404212 (Diatomea), uncultured marine 405198 (Diatomea), uncultured eukaryote 405217 (Diatomea), uncultured marine 405223 (Diatomea), uncultured eukaryote 405225 (Diatomea), uncultured marine 405229 (Diatomea), uncultured marine 405230 (Diatomea), uncultured marine 405235 (Diatomea), uncultured marine 405237 (Diatomea), uncultured eukaryote 405238 (Diatomea), uncultured marine 405257 (Diatomea), uncultured stramenopile 405309 (Diatomea), uncultured marine 405337 (Diatomea), uncultured eukaryote 404538 (Diatomea), Peridinium balticum (Diatomea), uncultured eukaryote 404676 (Diatomea), uncultured eukaryote 206394 (Diatomea), uncultured marine 277318 (Diatomea), uncultured marine 404997 (Diatomea), uncultured stramenopile 405010 (Diatomea), Nitzschia filiformis (Diatomea), uncultured eukaryote 406174 (Diatomea), uncultured stramenopile 406241 (Diatomea), Cocconeis stauroneiformis (Diatomea), uncultured marine 406267 (Diatomea), uncultured marine 406268 (Diatomea), uncultured eukaryote 406271 (Diatomea), uncultured marine 406272 (Diatomea), uncultured marine 406273 (Diatomea), uncultured eukaryote 406277 (Diatomea), uncultured eukaryote 406284 (Diatomea), uncultured eukaryote 406285 (Diatomea), Navicula sp. (Diatomea), uncultured eukaryote 406289 (Diatomea), Sellaphora pupula (Diatomea), uncultured eukaryote 406301 (Diatomea), uncultured marine 406319 (Diatomea), uncultured marine 406327 (Diatomea), uncultured eukaryote 406328 (Diatomea), uncultured eukaryote 406331 (Diatomea), uncultured marine 406345 (Diatomea), uncultured marine 406346 (Diatomea), uncultured eukaryote 406364 (Diatomea), uncultured marine 406410 (Diatomea), uncultured eukaryote 406411 (Diatomea), uncultured eukaryote 406435 (Diatomea), uncultured eukaryote 406461 (Diatomea), Odontella aurita (Diatomea), uncultured stramenopile 406465 (Diatomea), Thalassiosira pseudonana (Diatomea), Sellaphora laevissima (Diatomea), uncultured eukaryote 406540 (Diatomea), uncultured marine 406608 (Diatomea), uncultured marine 26390 (Diatomea), uncultured marine 206774 (Diatomea), uncultured marine 305581 (Diatomea), uncultured eukaryote 403420 (Diatomea), uncultured eukaryote 404444 (Diatomea), uncultured eukaryote 405830 (Diatomea), uncultured marine 405833 (Diatomea), uncultured stramenopile 405837 (Diatomea), uncultured marine 405840 (Diatomea), Amphora proteus (Diatomea), uncultured marine 405869 (Diatomea), uncultured marine 405878 (Diatomea), uncultured marine 406234 (Diatomea), uncultured marine 406296 (Diatomea), uncultured eukaryote 61244 (Diatomea), uncultured eukaryote 142066 (Diatomea), uncultured marine 155119 (Diatomea), uncultured marine 171408 (Diatomea), uncultured marine 172086 (Diatomea), uncultured marine 201209 (Diatomea), uncultured marine 268592 (Diatomea), Navicula salinicola (Diatomea), uncultured marine 337639 (Diatomea), uncultured eukaryote 351656 (Diatomea), uncultured marine 404213 (Diatomea), uncultured eukaryote 405241 (Diatomea), uncultured stramenopile 405836 (Diatomea), uncultured marine 406231 (Diatomea), Navicula diserta (Diatomea), uncultured eukaryote 406547 (Diatomea), uncultured eukaryote 407789 (Diatomea), uncultured marine 407791 (Diatomea), uncultured marine 407792 (Diatomea), uncultured marine 407793 (Diatomea), uncultured marine 407796 (Diatomea), uncultured marine 407797 (Diatomea), uncultured eukaryote 407799 (Diatomea), uncultured eukaryote 407801 (Diatomea), uncultured eukaryote 407811 (Diatomea), uncultured marine 407813 (Diatomea), uncultured marine 407842 (Diatomea), uncultured marine 407843 (Diatomea), uncultured marine 407850 (Diatomea), uncultured marine 407867 (Diatomea), uncultured marine 407871 (Diatomea), uncultured marine 407872 (Diatomea), uncultured marine 407873 (Diatomea), uncultured marine 407874 (Diatomea), uncultured marine 408592 (Diatomea), Halamphora cf. (Diatomea), uncultured stramenopile 408615 (Diatomea), uncultured eukaryote 408616 (Diatomea), uncultured eukaryote 408624 (Diatomea), uncultured eukaryote 408668 (Diatomea), uncultured marine 408819 (Diatomea), uncultured marine 408820 (Diatomea), uncultured marine 408862 (Diatomea), uncultured marine 408903 (Diatomea), uncultured marine 408905 (Diatomea), uncultured eukaryote 408906 (Diatomea), uncultured eukaryote 408910 (Diatomea), uncultured eukaryote 408912 (Diatomea), uncultured eukaryote 408913 (Diatomea), Sellaphora cf. (Diatomea), Trieres sp. (Diatomea), uncultured eukaryote 408958 (Diatomea), uncultured marine 408972 (Diatomea), uncultured marine 408974 (Diatomea), uncultured eukaryote 408976 (Diatomea), uncultured eukaryote 408978 (Diatomea), uncultured eukaryote 408982 (Diatomea), uncultured marine 408989 (Diatomea), Fragilariopsis doliolus (Diatomea), uncultured marine 409010 (Diatomea), uncultured marine 409011 (Diatomea), uncultured marine 409012 (Diatomea), uncultured marine 409015 (Diatomea), uncultured marine 409018 (Diatomea), uncultured marine 409021 (Diatomea), uncultured eukaryote 409022 (Diatomea), uncultured marine 409031 (Diatomea), uncultured marine 409033 (Diatomea), uncultured marine 409035 (Diatomea), uncultured marine 409036 (Diatomea), uncultured eukaryote 409039 (Diatomea), uncultured eukaryote 409040 (Diatomea), uncultured marine 409052 (Diatomea), uncultured stramenopile 409053 (Diatomea), uncultured stramenopile 409054 (Diatomea), uncultured marine 409055 (Diatomea), uncultured eukaryote 409069 (Diatomea), uncultured eukaryote 409073 (Diatomea), uncultured stramenopile 409075 (Diatomea), Seminavis sp. (Diatomea), uncultured eukaryote 409086 (Diatomea), uncultured eukaryote 409088 (Diatomea), uncultured eukaryote 409094 (Diatomea), uncultured marine 409098 (Diatomea), uncultured marine 409100 (Diatomea), uncultured marine 409101 (Diatomea), uncultured marine 409102 (Diatomea), uncultured marine 409105 (Diatomea), uncultured eukaryote 409116 (Diatomea), uncultured stramenopile 409117 (Diatomea), Bacillaria sp. (Diatomea), uncultured marine 409127 (Diatomea), uncultured marine 409158 (Diatomea), uncultured eukaryote 409159 (Diatomea), uncultured eukaryote 409160 (Diatomea), uncultured eukaryote 409173 (Diatomea), uncultured eukaryote 409177 (Diatomea), uncultured marine 409242 (Diatomea), uncultured eukaryote 409277 (Diatomea), uncultured marine 409279 (Diatomea), uncultured eukaryote 409280 (Diatomea), uncultured eukaryote 409281 (Diatomea), uncultured marine 409291 (Diatomea), uncultured eukaryote 409312 (Diatomea), uncultured eukaryote 409349 (Diatomea), uncultured marine 409359 (Diatomea), uncultured marine 409362 (Diatomea), uncultured eukaryote 409365 (Diatomea), uncultured marine 409366 (Diatomea), Biddulphia alternans (Diatomea), uncultured marine 409378 (Diatomea), uncultured marine 409398 (Diatomea), uncultured marine 409406 (Diatomea), uncultured marine 409407 (Diatomea), uncultured marine 409408 (Diatomea), uncultured eukaryote 409409 (Diatomea), Encyonema minutum (Diatomea), uncultured marine 409457 (Diatomea), uncultured eukaryote 409514 (Diatomea), uncultured eukaryote 409575 (Diatomea), uncultured eukaryote 409714 (Diatomea), uncultured eukaryote 409764 (Diatomea), uncultured eukaryote 409770 (Diatomea), uncultured eukaryote 409778 (Diatomea), uncultured eukaryote 409779 (Diatomea), uncultured marine 409782 (Diatomea), uncultured marine 409783 (Diatomea), uncultured eukaryote 409825 (Diatomea), uncultured eukaryote 409829 (Diatomea), uncultured marine 409834 (Diatomea), Convoluta convoluta (Diatomea), uncultured marine 409863 (Diatomea), uncultured marine 409895 (Diatomea), uncultured marine 409907 (Diatomea), Navicula brockmannii (Diatomea), uncultured marine 409947 (Diatomea), uncultured eukaryote 409969 (Diatomea), uncultured marine 409979 (Diatomea), uncultured marine 409980 (Diatomea), uncultured eukaryote 410026 (Diatomea), uncultured marine 410052 (Diatomea), uncultured eukaryote 410089 (Diatomea), uncultured eukaryote 410093 (Diatomea), uncultured stramenopile 410106 (Diatomea), uncultured marine 410120 (Diatomea), uncultured marine 410124 (Diatomea), Licmophora sp. (Diatomea), uncultured eukaryote 410138 (Diatomea), uncultured marine 410162 (Diatomea), uncultured eukaryote 410167 (Diatomea), uncultured eukaryote 410169 (Diatomea), uncultured eukaryote 410170 (Diatomea), Stauroneis acuta (Diatomea), Biddulphia sp. (Diatomea), uncultured stramenopile 410196 (Diatomea), Rossia sp. (Diatomea), uncultured eukaryote 410225 (Diatomea), uncultured marine 410235 (Diatomea), uncultured marine 410238 (Diatomea), uncultured eukaryote 410288 (Diatomea), Cymbella cistuliformis (Diatomea), uncultured stramenopile 410296 (Diatomea), uncultured marine 410300 (Diatomea), uncultured marine 410324 (Diatomea), uncultured marine 410332 (Diatomea), Halamphora holsatica (Diatomea), uncultured marine 410499 (Diatomea), uncultured marine 410519 (Diatomea), uncultured eukaryote 410520 (Diatomea), uncultured marine 410522 (Diatomea), uncultured stramenopile 410533 (Diatomea), uncultured marine 410556 (Diatomea), uncultured marine 410783 (Diatomea), uncultured marine 410788 (Diatomea), uncultured marine 410818 (Diatomea), uncultured marine 410849 (Diatomea), Phaeodactylum tricornutum (Diatomea), uncultured eukaryote 410876 (Diatomea), uncultured eukaryote 410887 (Diatomea), uncultured marine 410907 (Diatomea), uncultured eukaryote 410934 (Diatomea), uncultured marine 410938 (Diatomea), uncultured marine 410949 (Diatomea), uncultured marine 45551 (Diatomea), uncultured marine 61198 (Diatomea), uncultured marine 66285 (Diatomea), uncultured eukaryote 171547 (Diatomea), uncultured marine 295284 (Diatomea), uncultured eukaryote 326671 (Diatomea), uncultured marine 405009 (Diatomea), uncultured marine 416779 (Diatomea), uncultured eukaryote 416782 (Diatomea), uncultured marine 416808 (Diatomea), uncultured marine 416818 (Diatomea), uncultured marine 416823 (Diatomea), uncultured marine 416824 (Diatomea), uncultured marine 416825 (Diatomea), Fragilariopsis cylindrus (Diatomea), uncultured eukaryote 416829 (Diatomea), uncultured marine 416832 (Diatomea), uncultured marine 416834 (Diatomea), uncultured eukaryote 416835 (Diatomea), uncultured marine 416840 (Diatomea), uncultured eukaryote 416843 (Diatomea), uncultured marine 416844 (Diatomea), uncultured eukaryote 416845 (Diatomea), uncultured marine 416850 (Diatomea), uncultured marine 416853 (Diatomea), uncultured eukaryote 416857 (Diatomea), uncultured eukaryote 416860 (Diatomea), uncultured marine 416861 (Diatomea), uncultured eukaryote 416870 (Diatomea), uncultured marine 416872 (Diatomea), uncultured eukaryote 416873 (Diatomea), uncultured marine 416880 (Diatomea), uncultured marine 416881 (Diatomea), Achnanthidium coarctatum (Diatomea), uncultured stramenopile 416887 (Diatomea), uncultured eukaryote 416888 (Diatomea), Biremis sp. (Diatomea), uncultured stramenopile 416890 (Diatomea), uncultured stramenopile 416891 (Diatomea), uncultured stramenopile 416892 (Diatomea), uncultured stramenopile 416893 (Diatomea), uncultured stramenopile 416894 (Diatomea), uncultured stramenopile 416896 (Diatomea), uncultured eukaryote 416897 (Diatomea), uncultured stramenopile 416898 (Diatomea), uncultured eukaryote 416899 (Diatomea), uncultured stramenopile 416900 (Diatomea), uncultured marine 416901 (Diatomea), uncultured stramenopile 416902 (Diatomea), uncultured eukaryote 416906 (Diatomea), uncultured marine 416915 (Diatomea), uncultured marine 416918 (Diatomea), uncultured marine 416922 (Diatomea), uncultured eukaryote 416931 (Diatomea), uncultured marine 416932 (Diatomea), uncultured eukaryote 416933 (Diatomea), uncultured eukaryote 416934 (Diatomea), uncultured marine 416936 (Diatomea), uncultured marine 416981 (Diatomea), uncultured eukaryote 416983 (Diatomea), uncultured eukaryote 417047 (Diatomea), uncultured marine 417056 (Diatomea), uncultured marine 417061 (Diatomea), uncultured marine 417070 (Diatomea), uncultured eukaryote 417091 (Diatomea), uncultured eukaryote 417092 (Diatomea), uncultured marine 417111 (Diatomea), uncultured marine 417115 (Diatomea), uncultured marine 417140 (Diatomea), uncultured eukaryote 417151 (Diatomea), uncultured marine 417169 (Diatomea), uncultured eukaryote 417180 (Diatomea), uncultured marine 417209 (Diatomea), uncultured eukaryote 417216 (Diatomea), uncultured eukaryote 417242 (Diatomea), uncultured eukaryote 417252 (Diatomea), uncultured eukaryote 417256 (Diatomea), uncultured marine 417260 (Diatomea), uncultured eukaryote 417266 (Diatomea), uncultured eukaryote 417267 (Diatomea), uncultured eukaryote 417287 (Diatomea), uncultured eukaryote 417288 (Diatomea), uncultured marine 417289 (Diatomea), uncultured marine 417292 (Diatomea), uncultured marine 417293 (Diatomea), Fistulifera saprophila (Diatomea), uncultured eukaryote 417296 (Diatomea), uncultured stramenopile 417308 (Diatomea), uncultured eukaryote 417311 (Diatomea), uncultured marine 417318 (Diatomea), Entomoneis sp. (Diatomea), uncultured marine 417324 (Diatomea), uncultured marine 417325 (Diatomea), Halamphora coffeaeformis (Diatomea), uncultured marine 417332 (Diatomea), uncultured marine 417333 (Diatomea), uncultured marine 417334 (Diatomea), uncultured marine 417336 (Diatomea), uncultured eukaryote 417342 (Diatomea), Cyclophora tenuis (Diatomea), uncultured marine 417356 (Diatomea), uncultured eukaryote 417357 (Diatomea), uncultured marine 417458 (Diatomea), uncultured eukaryote 417472 (Diatomea), Amphidinium sp. (Dinoflagellata), Symbiodinium sp. (Dinoflagellata), uncultured eukaryote 208881 (Dinoflagellata), Heterocapsa triquetra (Dinoflagellata), uncultured eukaryote 403222 (Dinoflagellata), Leiocephalium pseudosanguineum (Dinoflagellata), uncultured eukaryote 403126 (Dinoflagellata), Ostreopsis cf. (Dinoflagellata), uncultured eukaryote 1314 (Dinoflagellata), Amphidinium steinii (Dinoflagellata), uncultured eukaryote 5615 (Dinoflagellata), uncultured eukaryote 406260 (Dinoflagellata), Thecate dinoflagellate (Dinoflagellata), Aduncodinium glandula (Dinoflagellata), Polarella glacialis (Dinoflagellata), Blastodinium pruvoti (Dinoflagellata), Dinophyta sp. (Dinoflagellata), uncultured eukaryote 409114 (Dinoflagellata), cryptoperidiniopsoid sp. (Dinoflagellata), uncultured eukaryote 410839 (Dinoflagellata), uncultured eukaryote 410840 (Dinoflagellata), uncultured eukaryote 416807 (Dinoflagellata), uncultured eukaryote 416909 (Dinoflagellata), uncultured eukaryote 417013 (Dinoflagellata), Protodinium simplex (Dinoflagellata), uncultured eukaryote 417079 (Dinoflagellata), uncultured eukaryote 417083 (Dinoflagellata), uncultured eukaryote 417456 (Dinoflagellata), uncultured eukaryote 417463 (Dinoflagellata), uncultured eukaryote 417466 (Dinoflagellata), Notosolenus urceolatus (Euglenozoa), Diplonema sp. (Euglenozoa), uncultured eukaryote 34327 (Euglenozoa), uncultured eukaryote 402888 (Euglenozoa), uncultured kinetoplastid 403045 (Euglenozoa), Neobodo saliens (Euglenozoa), Hemistasiidae sp. (Euglenozoa), Rhynchopus sp. (Euglenozoa), Neobodo designis (Euglenozoa), Diplonemida gen. (Euglenozoa), uncultured eukaryote 407783 (Euglenozoa), uncultured eukaryote 407784 (Euglenozoa), uncultured eukaryote 407906 (Euglenozoa), uncultured eukaryote 416803 (Euglenozoa), uncultured eukaryote 3043 (Eukaryota), Symbiochloris sp. (Eukaryota), Paramoeba branchiphila (Eukaryota), Pseudoparamoeba pagei (Eukaryota), Paramoeba aestuarina (Eukaryota), Asterocladon interjectum (Eukaryota), uncultured eukaryote 35940 (Eukaryota), Salpingoeca infusionum (Eukaryota), uncultured eukaryote 60639 (Eukaryota), Pirum gemmata (Eukaryota), uncultured eukaryote 1494 (Eukaryota), Halothrix ambigua (Eukaryota), Goniomonas aff. (Eukaryota), Rhodomonas abbreviata (Eukaryota), Ulvella viridis (Eukaryota), Rhodomonas sp. (Eukaryota), Rhinomonas pauca (Eukaryota), Calliacantha sp. (Eukaryota), Ancoracysta twista (Eukaryota), Gungnir sp. (Eukaryota), uncultured eukaryote 403956 (Eukaryota), Ciliophrys infusionum (Eukaryota), Mantamonas sp. (Eukaryota), Cantina marsupialis (Eukaryota), Ectocarpus siliculosus (Eukaryota), uncultured eukaryote 168335 (Eukaryota), Lychaete pellucidoidea (Eukaryota), uncultured eukaryote 405316 (Eukaryota), Chrysophyceae sp. (Eukaryota), uncultured marine 24507 (Eukaryota), Chattonella subsalsa (Eukaryota), Rhizoclonium hieroglyphicum (Eukaryota), uncultured eukaryote 405006 (Eukaryota), Savillea micropora (Eukaryota), uncultured eukaryote 406419 (Eukaryota), uncultured eukaryote 406420 (Eukaryota), Choanoeca perplexa (Eukaryota), uncultured eukaryote 406445 (Eukaryota), Paramoeba pemaquidensis (Eukaryota), uncultured eukaryote 405849 (Eukaryota), Micromonas pusilla (Eukaryota), Rhizoclonium sp. (Eukaryota), Costaria costata (Eukaryota), Asterocladon rhodochortonoides (Eukaryota), Desmarestia viridis (Eukaryota), Scytosiphon lomentaria (Eukaryota), Diplosphaera chodatii (Eukaryota), uncultured Dunaliellaceae 409133 (Eukaryota), uncultured marine 409897 (Eukaryota), uncultured eukaryote 410012 (Eukaryota), uncultured Dunaliellaceae 410823 (Eukaryota), uncultured eukaryote 417167 (Eukaryota), uncultured eukaryote 417176 (Eukaryota), uncultured eukaryote 417177 (Eukaryota), uncultured marine 417248 (Eukaryota), metagenome (Eukaryota), uncultured Corallinales 32406 (Florideophycidae), Peyssonnelia novae-hollandiae (Florideophycidae), uncultured Corallinales 52775 (Florideophycidae), uncultured Corallinales 402742 (Florideophycidae), uncultured Corallinales 152450 (Florideophycidae), uncultured Corallinales 32421 (Florideophycidae), uncultured Corallinales 402832 (Florideophycidae), uncultured Corallinales 402842 (Florideophycidae), uncultured Corallinales 402849 (Florideophycidae), uncultured Corallinales 325432 (Florideophycidae), uncultured Corallinales 402950 (Florideophycidae), uncultured Corallinales 402962 (Florideophycidae), uncultured Corallinales 325121 (Florideophycidae), Melobesioideae sp. (Florideophycidae), uncultured Corallinales 403138 (Florideophycidae), uncultured Corallinales 207352 (Florideophycidae), uncultured Corallinales 32448 (Florideophycidae), uncultured Corallinales 329211 (Florideophycidae), Bossiella orbigniana (Florideophycidae), uncultured Corallinales 403484 (Florideophycidae), Renouxia sp. (Florideophycidae), uncultured Corallinales 327858 (Florideophycidae), uncultured Corallinales 403869 (Florideophycidae), Mesophyllum sp. (Florideophycidae), uncultured Corallinales 404046 (Florideophycidae), uncultured Corallinales 404082 (Florideophycidae), uncultured Corallinales 404083 (Florideophycidae), uncultured Corallinales 404085 (Florideophycidae), uncultured Corallinales 404354 (Florideophycidae), Lithothamnion glaciale (Florideophycidae), uncultured Corallinales 404356 (Florideophycidae), uncultured Corallinales 404357 (Florideophycidae), Mastophoropsis canaliculata (Florideophycidae), uncultured Corallinales 147857 (Florideophycidae), Gastroclonium pacificum (Florideophycidae), uncultured Corallinales 404725 (Florideophycidae), uncultured Corallinales 404729 (Florideophycidae), uncultured Corallinales 64865 (Florideophycidae), Gloiocladia repens (Florideophycidae), Peyssonnelia capensis (Florideophycidae), uncultured Corallinales 404728 (Florideophycidae), uncultured Corallinales 405328 (Florideophycidae), uncultured Corallinales 405330 (Florideophycidae), Peyssonnelia sp. (Florideophycidae), uncultured Corallinales 406503 (Florideophycidae), Corallinales sp. (Florideophycidae), uncultured Corallinales 406516 (Florideophycidae), uncultured Corallinales 406517 (Florideophycidae), uncultured Corallinales 406519 (Florideophycidae), uncultured Corallinales 406521 (Florideophycidae), uncultured Corallinales 406522 (Florideophycidae), uncultured Corallinales 406525 (Florideophycidae), uncultured Corallinales 406536 (Florideophycidae), uncultured Corallinales 406537 (Florideophycidae), uncultured Corallinales 406538 (Florideophycidae), uncultured Corallinales 199057 (Florideophycidae), uncultured Corallinales 315003 (Florideophycidae), uncultured Corallinales 402428 (Florideophycidae), uncultured Corallinales 408646 (Florideophycidae), uncultured Corallinales 409858 (Florideophycidae), uncultured Corallinales 410008 (Florideophycidae), uncultured Corallinales 410108 (Florideophycidae), uncultured Corallinales 410268 (Florideophycidae), uncultured Corallinales 410315 (Florideophycidae), uncultured Corallinales 410317 (Florideophycidae), Botryocladia iridescens (Florideophycidae), uncultured Corallinales 410348 (Florideophycidae), uncultured Corallinales 410374 (Florideophycidae), uncultured Corallinales 410375 (Florideophycidae), uncultured Corallinales 410377 (Florideophycidae), uncultured Corallinales 410378 (Florideophycidae), uncultured Corallinales 410395 (Florideophycidae), uncultured Corallinales 410401 (Florideophycidae), uncultured Corallinales 410402 (Florideophycidae), uncultured Corallinales 410408 (Florideophycidae), uncultured eukaryote 410409 (Florideophycidae), uncultured Corallinales 410410 (Florideophycidae), uncultured Corallinales 410411 (Florideophycidae), uncultured Corallinales 410413 (Florideophycidae), uncultured Corallinales 410414 (Florideophycidae), uncultured Corallinales 410418 (Florideophycidae), uncultured Corallinales 410419 (Florideophycidae), uncultured Corallinales 410420 (Florideophycidae), uncultured Corallinales 410423 (Florideophycidae), uncultured Corallinales 410425 (Florideophycidae), uncultured Corallinales 410426 (Florideophycidae), uncultured Corallinales 410427 (Florideophycidae), Mesophyllum lichenoides (Florideophycidae), uncultured Corallinales 410429 (Florideophycidae), uncultured Corallinales 410430 (Florideophycidae), uncultured Corallinales 410431 (Florideophycidae), uncultured Corallinales 410432 (Florideophycidae), uncultured Corallinales 410433 (Florideophycidae), uncultured Corallinales 410434 (Florideophycidae), uncultured Corallinales 410438 (Florideophycidae), uncultured Corallinales 410439 (Florideophycidae), uncultured Corallinales 410440 (Florideophycidae), uncultured Corallinales 410441 (Florideophycidae), uncultured Corallinales 410442 (Florideophycidae), uncultured Corallinales 410443 (Florideophycidae), uncultured Corallinales 410445 (Florideophycidae), uncultured Corallinales 410446 (Florideophycidae), uncultured Corallinales 410450 (Florideophycidae), uncultured Corallinales 410453 (Florideophycidae), uncultured Corallinales 410455 (Florideophycidae), uncultured Corallinales 410461 (Florideophycidae), uncultured Corallinales 410481 (Florideophycidae), uncultured Corallinales 410482 (Florideophycidae), uncultured Corallinales 410486 (Florideophycidae), uncultured Corallinales 410487 (Florideophycidae), uncultured Corallinales 410898 (Florideophycidae), Chaetonotus neptuni (Gastrotricha), Chaetonotus sp. (Gastrotricha), Halichaetonotus schromi (Gastrotricha), Aspidiophorus tentaculatus (Gastrotricha), uncultured eukaryote 406198 (Gastrotricha), uncultured eukaryote 408738 (Gastrotricha), uncultured eukaryote 408739 (Gastrotricha), Pirsonia guinardiae (Incertae_Sedis), uncultured eukaryote 258386 (Incertae_Sedis), Pirsonia punctigera (Incertae_Sedis), uncultured marine 404223 (Incertae_Sedis), uncultured marine 407853 (Incertae_Sedis), uncultured eukaryote 417314 (Incertae_Sedis), Katablepharis remigera (Kathablepharidae), uncultured microeukaryote 56470 (Kathablepharidae), uncultured marine 403446 (Kathablepharidae), uncultured marine 409978 (Kathablepharidae), uncultured marine 417348 (Kathablepharidae), uncultured marine 2482 (Labyrinthulomycetes), Oblongichytrium sp. (Labyrinthulomycetes), uncultured eukaryote 72 (Labyrinthulomycetes), Thraustochytrium pachydermum (Labyrinthulomycetes), Stellarchytrium dubum (Labyrinthulomycetes), labyrinthulid quahog (Labyrinthulomycetes), uncultured eukaryote 403047 (Labyrinthulomycetes), Aplanochytrium stocchinoi (Labyrinthulomycetes), uncultured eukaryote 326922 (Labyrinthulomycetes), uncultured marine 152829 (Labyrinthulomycetes), uncultured eukaryote 190854 (Labyrinthulomycetes), Thraustochytriidae sp. (Labyrinthulomycetes), uncultured eukaryote 1285 (Labyrinthulomycetes), uncultured eukaryote 5655 (Labyrinthulomycetes), Thraustochytrium multirudimentale (Labyrinthulomycetes), Labyrinthuloides minuta (Labyrinthulomycetes), Aplanochytrium sp. (Labyrinthulomycetes), uncultured eukaryote 314880 (Labyrinthulomycetes), uncultured eukaryote 405288 (Labyrinthulomycetes), uncultured marine 405289 (Labyrinthulomycetes), unidentified (Labyrinthulomycetes), uncultured eukaryote 144605 (Labyrinthulomycetes), uncultured marine 406325 (Labyrinthulomycetes), uncultured eukaryote 405858 (Labyrinthulomycetes), uncultured eukaryote 83451 (Labyrinthulomycetes), uncultured eukaryote 322642 (Labyrinthulomycetes), uncultured marine 402110 (Labyrinthulomycetes), uncultured eukaryote 407802 (Labyrinthulomycetes), uncultured marine 408829 (Labyrinthulomycetes), uncultured marine 408895 (Labyrinthulomycetes), uncultured marine 408969 (Labyrinthulomycetes), uncultured eukaryote 409493 (Labyrinthulomycetes), uncultured eukaryote 409788 (Labyrinthulomycetes), uncultured marine 409799 (Labyrinthulomycetes), uncultured marine 409801 (Labyrinthulomycetes), uncultured marine 409832 (Labyrinthulomycetes), uncultured eukaryote 409833 (Labyrinthulomycetes), uncultured marine 409985 (Labyrinthulomycetes), Aplanochytrium blankum (Labyrinthulomycetes), uncultured marine 410082 (Labyrinthulomycetes), uncultured eukaryote 410096 (Labyrinthulomycetes), uncultured eukaryote 410133 (Labyrinthulomycetes), uncultured marine 410172 (Labyrinthulomycetes), uncultured eukaryote 416869 (Labyrinthulomycetes), uncultured eukaryote 416905 (Labyrinthulomycetes), uncultured eukaryote 417043 (Labyrinthulomycetes), uncultured eukaryote 417128 (Labyrinthulomycetes), uncultured eukaryote 417135 (Labyrinthulomycetes), uncultured marine 417137 (Labyrinthulomycetes), uncultured eukaryote 417220 (Labyrinthulomycetes), uncultured marine 417247 (Labyrinthulomycetes), uncultured eukaryote 417265 (Labyrinthulomycetes), uncultured eukaryote 417483 (Labyrinthulomycetes), Pseudophyllomitus vesiculosus (MAST-6), eukaryote marine (MAST-6), uncultured marine 417300 (MAST-6), Chromadorita leuckarti (Nematozoa), Phanoderma sp. (Nematozoa), Thoracostomopsidae sp. (Nematozoa), uncultured stramenopile 352191 (Nucleariidae_and_Fonticula_group), metagenome (Nucleariidae_and_Fonticula_group), uncultured stramenopile 404547 (Nucleariidae_and_Fonticula_group), Haliphthoros sp. (Peronosporomycetes), uncultured stramenopile 403252 (Peronosporomycetes), uncultured stramenopile 402693 (Peronosporomycetes), Halodaphnea panulirata (Peronosporomycetes), Pythium anandrum (Peronosporomycetes), Pythium heterothallicum (Peronosporomycetes), uncultured stramenopile 417343 (Peronosporomycetes), Hordeum vulgare (Phragmoplastophyta), Oropetium thomaeum (Phragmoplastophyta), Coleochaete orbicularis (Phragmoplastophyta), Triticum aestivum (Phragmoplastophyta), Oryza meridionalis (Phragmoplastophyta), Zea mays (Phragmoplastophyta), Leucetta sp. (Porifera), Clathrina luteoculcitella (Porifera), Grantiopsis heroni (Porifera), Sycon capricorn (Porifera), Aphroceras sp. (Porifera), Ernstia adusta (Porifera), Murrayona phanolepis (Porifera), Eilhardia schulzei (Porifera), Leuconia nivea (Porifera), Haliclona fascigera (Porifera), Leucascandra caveolata (Porifera), Leucaltis clathria (Porifera), Clathrina aff. (Porifera), Soleneiscus radovani (Porifera), Sycon ciliatum (Porifera), uncultured eukaryote 405362 (Protalveolata), uncultured marine 406616 (Protalveolata), uncultured marine 407895 (Protalveolata), uncultured eukaryote 409989 (Protalveolata), uncultured Syndiniales 417182 (Protalveolata), hydrothermal vent (Retaria), uncultured marine 406404 (Retaria), uncultured marine 262637 (Retaria), uncultured marine 270020 (Retaria), uncultured marine 409472 (Retaria), uncultured marine 409495 (Retaria), uncultured marine 409716 (Retaria), Chromerida sp. (uncultured), uncultured eukaryote 75428 (uncultured), uncultured eukaryote 410727 (uncultured), uncultured eukaryote 410837 (uncultured)

Complete List of Microbes Identified

This list includes all microbes (Bacteria & Archae) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Unclassified Bacteria 10205, Nitrosopumilus sp., Unclassified Hyphomicrobiaceae 1489, Unclassified Bacteria 9720, Unclassified Bacteria 46552, Unclassified Bacteria 1800, Unclassified Bacteria 99470, Unclassified Bacteria 12276, Unclassified Bacteria 37668, Unclassified Bacteria 265294, Unclassified Bacteria 16461, Coraliomargarita sp., Unclassified Bacteria 26048, Unclassified Bacteria 265297, Unclassified Bacteria 27068, Mycobacterium sp., Microbulbifer sp., Unclassified Rhodobacteraceae 41, Luteolibacter sp., Unclassified Bacteria 791, Unclassified Bacteria 81095, Unclassified Bacteria 99481, Unclassified Coxiellaceae 2257, Unclassified Bacteria 1709, Unclassified Piscirickettsiaceae 9882, Unclassified Legionellaceae 117825, Unclassified Bacteria 710, Unclassified Bacteria 265303, Ucs1325 sp., Unclassified Rhodobacteraceae 427, Unclassified Coxiellaceae 265304, Unclassified Bacteria 30, Unclassified Bacteria 74059, Unclassified Pirellulaceae 31778, Unclassified Pirellulaceae 109571, Photobacterium sp., Unclassified Lentisphaeraceae 16574, Unclassified Hyphomicrobiaceae 9812, Unclassified Thiotrichaceae 40458, Unclassified Piscirickettsiaceae 58202, Unclassified Pirellulaceae 977, Unclassified Piscirickettsiaceae 106888, Unclassified Bacteria 949, Unclassified Nitrospiraceae 10233, Unclassified Piscirickettsiaceae 14186, Unclassified Bacteria 253201, Unclassified Bacteria 11398, Unclassified Bacteria 62059, Unclassified Bacteria 106949, Unclassified Bacteria 195181, Streptococcus infantis, Unclassified Bacteria 97386, Unclassified Coxiellaceae 265325, Unclassified Bacteria 265330, Unclassified Cenarchaeaceae 10730, Xenococcus sp., Unclassified Bacteria 265332, Unclassified Hyphomicrobiaceae 273, Unclassified Bacteria 74054, Unclassified Rhodobacteraceae 102, Staphylococcus aureus, Unclassified Flavobacteriaceae 25319, Desulfococcus sp., Unclassified Saprospiraceae 265341, Unclassified Piscirickettsiaceae 9849, Unclassified Piscirickettsiaceae 27707, Unclassified Bacteria 43182, Unclassified Pirellulaceae 94057, Unclassified Bacteria 108931, Unclassified Bacteria 56182, Unclassified Bacteria 108067, Unclassified Bacteria 109188, Unclassified Piscirickettsiaceae 207619, Unclassified Saprospiraceae 244797, Unclassified Bacteria 5749, Unclassified Bacteria 63333, Unclassified Bacteria 193270, Unclassified Cenarchaeaceae 248126, Cenarchaeum symbiosum, Unclassified Pirellulaceae 25805, Unclassified Bacteria 265359, Unclassified kpj58rc 265360, Unclassified Pirellulaceae 14864, Unclassified Bacteria 106955, Unclassified Bacteria 265366, Unclassified koll13 265367, HTCC sp., Unclassified Bacteria 36763, Unclassified Flammeovirgaceae 88337, Unclassified Ectothiorhodospiraceae 106525, Unclassified Lachnospiraceae 110487, Unclassified Flammeovirgaceae 193085, Unclassified Piscirickettsiaceae 221814, Unclassified Cenarchaeaceae 265380, Nautella sp., Unclassified Simkaniaceae 2541, Unclassified Phyllobacteriaceae 2578, Unclassified Xenococcaceae 43853, Unclassified Alteromonadaceae 74426, Unclassified HTCC2089 106897, Verrucomicrobium sp., Unclassified Piscirickettsiaceae 10336, Unclassified Flammeovirgaceae 109040, Unclassified Bacteria 243607, Rickettsia sp., Unclassified NB1-i 265401, Candidatus sp., Unclassified Bacteria 37473, Unclassified Rhodothermaceae 237758, Unclassified Lentisphaeraceae 265414, Unclassified Bacteria 1141, Unclassified Bacteria 8207, Unclassified Flammeovirgaceae 12619, Unclassified Pirellulaceae 25127, Unclassified Nitrospiraceae 55497, Unclassified Bacteria 165850, Unclassified Bacteria 198286, Pseudoalteromonas sp., Unclassified Bacteria 2338, Unclassified Alteromonadaceae 3157, Unclassified Bacteria 14516, Roseivirga sp., Bacillus sp., Unclassified Kordiimonadaceae 3562, Unclassified Coxiellaceae 66757, Unclassified Bacteria 81475, Unclassified Bacteria 265455, Unclassified Coxiellaceae 265456, Unclassified Bacteria 265463, Unclassified Bacteria 265464, Unclassified Lentisphaeraceae 15112, Unclassified Hyphomicrobiaceae 32345, Unclassified [Amoebophilaceae] 93817, Unclassified Coxiellaceae 115136, Unclassified Legionellaceae 220527, Unclassified Bacteria 248555, Unclassified Bacteriovoracaceae 265483, Unclassified Bacteria 265488, Vibrio sp., Unclassified Bacteria 12805, Unclassified Bacteria 68429, Unclassified Bacteria 93585, Unclassified Bacteria 212925, Unclassified Bacteria 265505, Unclassified Bacteria 265513, Unclassified Bacteria 2783, Unclassified Nitrospiraceae 25185, Curtobacterium sp., Unclassified Piscirickettsiaceae 54875, Unclassified Oceanospirillaceae 193210, Unclassified Bacteria 265530, Unclassified Bacteria 265532, Unclassified Pirellulaceae 265548, Unclassified Saprospiraceae 265549, Unclassified HTCC2089 736, Unclassified Saprospiraceae 25888, Unclassified Rhodobacteraceae 52827, Unclassified Piscirickettsiaceae 131798, Unclassified Micrococcaceae 154916, Plesiocystis sp., Unclassified Bacteria 222334, Unclassified Bacteria 265581, Unclassified Oleiphilaceae 175, Unclassified Bacteria 3302, Unclassified Bacteria 10171, Unclassified Pirellulaceae 14948, Unclassified Piscirickettsiaceae 25302, Unclassified Bacteria 68754, Unclassified Bacteria 122870, Unclassified Saprospiraceae 133393, Unclassified Bacteria 258163, Unclassified Bacteria 265603, Unclassified Legionellaceae 265611, Maricaulis sp., Unclassified [Amoebophilaceae] 1274, Unclassified Bacteria 2152, Unclassified Bacteria 3108, Pseudomonas sp., Unclassified Rhodothermaceae 26844, Unclassified Piscirickettsiaceae 107003, Unclassified mitochondria 196496, Unclassified Pirellulaceae 235523, Unclassified Saprospiraceae 265666, Unclassified HTCC2089 265680, Unclassified Flammeovirgaceae 5836, Unclassified Bacteria 11410, Veillonella sp., Unclassified Flammeovirgaceae 109612, Unclassified Bacteria 126930, Unclassified koll13 131723, Unclassified Bacteria 238557, Unclassified Pirellulaceae 244865, Unclassified Thiotrichaceae 248992, Unclassified Bacteria 265725, Unclassified Bacteria 265726, Unclassified Pirellulaceae 265743, Unclassified Bacteria 265744, Unclassified Hyphomonadaceae 290, Unclassified Bacteria 5931, Unclassified Bacteria 10019, Streptococcus sp., Unclassified Flammeovirgaceae 28198, Unclassified Pirellulaceae 32237, Unclassified Bacteria 36003, Unclassified PK34 107305, Unclassified koll13 109190, Unclassified Ectothiorhodospiraceae 131716, Unclassified Cenarchaeaceae 132595, Unclassified Simkaniaceae 220298, Unclassified Rickettsiaceae 265789, Unclassified Rickettsiaceae 265799, Unclassified Ectothiorhodospiraceae 265818, Hirschia baltica, Unclassified Saprospiraceae 69157, Unclassified Saprospiraceae 107008, Unclassified Bacteria 132072, Vogesella sp., Unclassified HTCC2089 195078, Unclassified Bacteria 265877, Unclassified Erythrobacteraceae 265878, Unclassified Coxiellaceae 265879, Unclassified Bacteria 265883, Unclassified Bacteria 265884, Unclassified Phyllobacteriaceae 265885, Unclassified Bacteria 265921, Unclassified Saprospiraceae 265922, Planctomyces sp., Amphritea sp., Unclassified Francisellaceae 4745, Unclassified Bacteria 26590, Unclassified Bacteria 69301, Hyphomicrobium sp., Unclassified Legionellaceae 134085, Unclassified Bacteria 220966, Unclassified Bacteria 265991, Unclassified Bacteria 265997, Unclassified Erythrobacteraceae 266042, Unclassified Bacteria 266043, Unclassified Thiotrichaceae 266044, Unclassified Bacteria 378, Unclassified Bradyrhizobiaceae 1033, Unclassified Phyllobacteriaceae 1520, Achromobacter sp., Unclassified Pirellulaceae 12596, Unclassified Bacteria 55230, Unclassified Bacteria 87126, Unclassified koll13 107104, Unclassified Pirellulaceae 124685, Unclassified Saprospiraceae 195211, Unclassified Saprospiraceae 221379, Unclassified Bacteria 266215, Unclassified Piscirickettsiaceae 266219, Unclassified Hyphomonadaceae 817, Unclassified Oceanospirillaceae 1096, Unclassified Rhodobacteraceae 1312, Unclassified Flammeovirgaceae 1479, Unclassified Nitrosomonadaceae 2503, Devosia sp., Pelagicoccus sp., Granulicatella sp., Unclassified Kordiimonadaceae 26208, Unclassified Saprospiraceae 50246, Actinobacillus sp., Unclassified Bacteria 99835, Unclassified Pirellulaceae 187434, Unclassified Oceanospirillaceae 225061, Unclassified Bacteria 266368, Unclassified Criblamydiaceae 266389, SC3-56 sp., Unclassified Bacillaceae 266398, Unclassified Bacteria 266469, Unclassified Saprospiraceae 266473, Unclassified Flammeovirgaceae 266474, Unclassified Saprospiraceae 364, Unclassified Bacteria 2299, Unclassified Bacteria 3308, Unclassified Phyllobacteriaceae 9875, Unclassified Pirellulaceae 10845, Sphingomonas sp., Unclassified Saprospiraceae 112659, Unclassified Rhodothermaceae 196733, Rhodococcus sp., Unclassified Bacteria 266673, Unclassified Bacteria 266681, Alcanivorax sp., Unclassified Oleiphilaceae 266704, Unclassified Rickettsiaceae 266714, Unclassified Pirellulaceae 266799, Unclassified Nitrospiraceae 266800, Unclassified Bacteria 266802, Unclassified Oleiphilaceae 266804, Unclassified Piscirickettsiaceae 266806, Balneola sp., Unclassified Bacteria 1488, Corynebacterium kroppenstedtii, Gordonia sp., Unclassified Intrasporangiaceae 44236, Unclassified Piscirickettsiaceae 99485, Unclassified Bacteria 129143, Unclassified Syntrophobacteraceae 168884, Unclassified Bacteria 220729, LCP-26 sp., Unclassified Bacteria 223903, Unclassified Bacteria 249338, Unclassified Kordiimonadaceae 266698, Unclassified Coxiellaceae 267142, Unclassified Coxiellaceae 267143, Unclassified Bacteria 267156, Unclassified Bacteria 267161, Unclassified Bacteria 267167, Unclassified Bacteria 267175, Unclassified Bacteria 267193, Unclassified Pirellulaceae 267312, Unclassified Pirellulaceae 267314, Unclassified Bacteria 267316, Unclassified Bacteria 267321, Unclassified Rhodospirillaceae 267322, Unclassified Rhodospirillaceae 267323, Unclassified Rhodobacteraceae 267324, Unclassified HTCC2089 267325, Unclassified Saprospiraceae 267331, Unclassified Saprospiraceae 267332, Unclassified Bacteria 267336, Unclassified Piscirickettsiaceae 267340, Unclassified Bacteria 267341, Unclassified Bacteria 627, Unclassified Oceanospirillaceae 13895, Unclassified Bacteria 15440, Neisseria sp., Unclassified Rhodospirillaceae 55767, Unclassified [Marinicellaceae] 108736, Unclassified Rhodothermaceae 132146, Unclassified Rhodobacteraceae 143383, Unclassified Bacteria 143384, Unclassified Piscirickettsiaceae 143392, Unclassified Bacteria 197017, Unclassified Bacteria 207665, Crocinitomix sp., Unclassified Bacteria 230448, Unclassified Hyphomicrobiaceae 266685, Unclassified Pirellulaceae 267872, Unclassified Bacteria 267877, Unclassified Coxiellaceae 267880, Unclassified Bacteria 267890, Unclassified Bacteria 267902, Unclassified Bacteria 267903, Unclassified Bacteria 267920, Unclassified Bacteria 267921, Unclassified Bacteria 267922, Thiothrix sp., Unclassified Bacteria 267931, Unclassified Bacteria 267932, Unclassified Micrococcaceae 267960, Unclassified Micrococcaceae 267961, Kingella sp., Unclassified Lentisphaeraceae 267967, Unclassified Pirellulaceae 268163, Unclassified Pirellulaceae 268164, Unclassified Pirellulaceae 268167, Unclassified Bacteria 268169, Unclassified Bacteria 268174, Unclassified Bacteria 268175, Unclassified Saprospiraceae 268176, Unclassified Bacteria 268179, Unclassified Bacteria 268182, Unclassified Bacteria 268183, Unclassified Piscirickettsiaceae 268185, Unclassified Piscirickettsiaceae 268186, Unclassified Piscirickettsiaceae 268188, Unclassified Piscirickettsiaceae 268190, Unclassified Bacteria 268192, Unclassified Saprospiraceae 268194, Unclassified Saprospiraceae 268196, Unclassified Saprospiraceae 268201, Unclassified Flammeovirgaceae 268203, Unclassified Piscirickettsiaceae 268205, Unclassified Piscirickettsiaceae 268207, Unclassified Bacteria 268208, Unclassified Oleiphilaceae 450, Unclassified Rhodospirillaceae 132611, Unclassified Piscirickettsiaceae 135390, Unclassified OM60 137562, Unclassified Bacteria 139743, Unclassified Rhodobacteraceae 143072, Unclassified Rhodobacteraceae 144154, Unclassified Bacteria 150445, Unclassified Hyphomicrobiaceae 159819, Unclassified Hyphomicrobiaceae 164438, Unclassified Hyphomicrobiaceae 169231, Unclassified Bacteria 176300, Unclassified Hyphomicrobiaceae 206770, Unclassified Saprospiraceae 220473, Cellulomonas sp., Unclassified Pirellulaceae 269847, Unclassified Bacteria 269848, Unclassified Coxiellaceae 269855, Unclassified Coxiellaceae 269857, Unclassified Coxiellaceae 269859, Unclassified Rickettsiaceae 269898, Unclassified Hyphomicrobiaceae 269899, Unclassified Hyphomicrobiaceae 269900, Unclassified Bacteria 269922, Unclassified Bacteria 269945, Unclassified Bacteria 269946, Unclassified Bacteria 269947, Unclassified Bacteria 269948, Unclassified Bacteria 269950, Unclassified Bacteria 269951, Unclassified Rhodospirillaceae 269954, Unclassified Oleiphilaceae 269980, Unclassified Oleiphilaceae 269983, Unclassified Oceanospirillaceae 269997, Unclassified Bacteria 269998, Unclassified Legionellaceae 270000, Unclassified Legionellaceae 270001, Unclassified Saprospiraceae 270015, Unclassified Saprospiraceae 270016, Unclassified Bacteria 270028, Microbulbifer elongatus, Corynebacterium sp., Unclassified Pirellulaceae 270610, Unclassified Pirellulaceae 270611, Unclassified Rhodobacteraceae 270612, Unclassified Pirellulaceae 270616, Unclassified Piscirickettsiaceae 270617, Unclassified Bacteria 270618, Unclassified Bacteria 270619, Unclassified Pirellulaceae 270622, Unclassified Rhodobacteraceae 270623, Unclassified Bacteria 270625, Unclassified Piscirickettsiaceae 270634, Unclassified Bacteria 270635, Unclassified Bacteria 270636, Unclassified Bacteria 270637, Unclassified Bacteria 270638, Unclassified Bacteria 270639, Unclassified Bacteria 270641, Unclassified Rhodobacteraceae 270642, Unclassified Rhodobacteraceae 270644, Unclassified Piscirickettsiaceae 270645, Unclassified Thiotrichaceae 270648, Unclassified Piscirickettsiaceae 270649, Unclassified Piscirickettsiaceae 270650, Unclassified Piscirickettsiaceae 270652, Unclassified Oleiphilaceae 270653, Unclassified Oleiphilaceae 270654, Unclassified Piscirickettsiaceae 270655, Unclassified Piscirickettsiaceae 270656, Unclassified Piscirickettsiaceae 270657, Unclassified Bacteria 270661, Unclassified Bacteria 270662, Unclassified Bacteria 270663, Unclassified Bacteria 270664, Unclassified Bacteria 270665, Unclassified Bacteria 270666, Unclassified Thiotrichaceae 270667, Unclassified Bacteria 270668, Unclassified Saprospiraceae 270672, Lewinella sp., Unclassified Saprospiraceae 270675, Unclassified Flavobacteriaceae 270681, Unclassified Rhodothermaceae 270691, Unclassified Flammeovirgaceae 270694, Unclassified Flammeovirgaceae 270695, Unclassified Bacteria 270697, Unclassified Rhodobacteraceae 270698, Unclassified Piscirickettsiaceae 270699, Unclassified Piscirickettsiaceae 270702, Unclassified Piscirickettsiaceae 270703, Unclassified Piscirickettsiaceae 270704, Unclassified Piscirickettsiaceae 270705, Unclassified Piscirickettsiaceae 270706, Unclassified Flammeovirgaceae 270707

DNA analysis conducted by AquaBiomics LLC.

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Certificate of Analysis LRR G9.1

Certificate of Analysis: Live Reef Rubble, Batch LRR G9.1

lrr.g9.1_Certificate_of_Analysis

    Certificate of Analysis


About this report

This report summarizes the results from DNA analysis of the community growing in and on a batch of Live Reef Rubble. Universal genetic markers were amplified from microbial (prokaryotic) and other (eukaryotic) DNA in the sample, and thousands of individual DNA molecules from this mixture were sequenced. Each sequence was then compared with public DNA databases to identify its origin. This report summarizes the kinds of organisms detected in the sample, with a focus on beneficial microbes, pathogens, and parasites.

Information about this sample
Sample ID lrr.g9.1
Batch Name G04-01-2025
Sample Date Apr 21, 2025 9:00 AM

Microbial Diversity

This sample contained DNA from 1187 different types of microbes.


This pie chart shows the diversity of each microbial family found in the sample. The size of each slice is proportional to the number of different types (labels on each slice). For clarity, only families containing 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Nitrifying Community

Ammonia-Oxidizing Microbes

Cenarchaeaceae
Type Percent of Community Genus Species
73 0.55 Nitrosopumilus Unknown
265392 0.10 Nitrosopumilus Unknown
640 0.07 Nitrosopumilus Unknown
189267 0.06 Nitrosopumilus Unknown
248126 0.06 Unknown Unknown
31900 0.05 Nitrosopumilus Unknown
20 0.03 Nitrosopumilus Unknown
31721 0.01 Unknown Unknown

Nitrite-Oxidizing Bacteria

Nitrospiraceae
Type Percent of Community Genus Species
2912 0.04 Unknown Unknown
The nitrifying community in this sample included 9 different types of microbes.

Bacterial Pathogens

None found.

Complete list of pathogens we screened for:

Eubacterium tarantellae, Lactococcus garvieae, Enterococcus seriolicida, Streptococcus parauberis, Streptococcus iniae, Mycobacterium chelonei, Mycobacterium fortuitum, Mycobacterium marinum, Mycobacterium neoaurum, Nocardia asteroides, Nocardia salmonicida, Nocardia seriolae, Renibacterium salmoninarum, Aeromonas jandaei, Aeromonas salmonicida, Serratia liquefaciens, Chryseobacterium balustinum, Chryseobacterium scophthalmum, Tenacibaculum maritimus, Tenacibaculum ovolyticus, Pasteurella skyensis, Pseudomonas anguilliseptica, Moritella marina, Moritella viscosa, Photobacterium damselae, Shewanella putrefaciens, Vibrio alginolyticus, Vibrio cholerae, Vibrio fischeri, Vibrio furnissii, Vibrio harveyi, Vibrio carchariae, Vibrio trachuri, Vibrio ichthyoenteri, Vibrio logei, Vibrio ordalii, Vibrio pelagius, Vibrio salmonicida, Vibrio splendidus, Halomonas cupida, Piscirickettsia salmonis, Vibrio shiloi, Vibrio coralliilyticus, Vibrio harveyi, Aurantimonas coralicida, Vibrio rotiferianus, Vibrio alginolyticus, Vibrio proteolyticus, Vibrio charcharvina, Serratia marcescens, Aquarickettsia rohweri

Eukaryotic Biodiversity

This sample contained DNA from 2118 different Eukaryotic sources.


This pie chart shows the diversity of each Eukaryotic Phylum detected in the sample. The size of each slice is proportional to the number of different types from each phylum. For clarity, only families containing 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Parasites

None of the DNA sequences from this sample matched known parasites.
Group Description Percent of eDNA
Amyloodinium Dinoflagellate parasites responsible for the fish disease Marine Velvet 0
Cryptocaryon Ciliate parasites responsible for the fish disease Ich 0
Brooklynella Ciliate parasites responsible for the fish disease Brook 0
Uronema Ciliate parasites responsible for a fish disease called by the same name 0
Phestilla Montipora-eating Nudibranchs 0
Amakusaplana Acropora-eating Flatworms 0
Ancyrocephalidae Flatworms often called Flukes that parasitize fish 0
Gyrodactylidae Flatworms often called Flukes that parasitize fish 0
Capsalidae Flatworms often called Flukes that parasitize fish 0
Turbonilla Snails in the family Pyramidellidae that parasitize giant clams 0
Trichodina A ciliated protozoan parasite of fish 0

Other Animal Pests

None of the DNA sequences from this sample matched known animal pests.
Group Description Percent of eDNA
Aiptasia The glass anemone, a ubiquitous pest 0
Thylacodes Vermetid snails 0
Asterina A group of sea stars that includes coral predators 0

Complete list of Eukaryotes identified

This list includes all Eukaryotes (Animals, Protists, and anything else besides Bacteria or Archaea) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Chitinopoma serrula (Annelida), Dinophilus gyrociliatus (Annelida), Novafabricia sp. (Annelida), Fabricinuda trilobata (Annelida), Hydroides pseudouncinata (Annelida), Protula sp. (Annelida), uncultured eukaryote sq171424 (Apicomplexa), uncultured eukaryote sq418794 (Apicomplexa), Amastigomonas bermudensis (Apusomonadidae), Fabomonas tropica (Apusomonadidae), uncultured eukaryote sq2999 (Arthropoda), Coquimba ishizakii (Arthropoda), Isobactrus uniscutatus (Arthropoda), Cosmochthonius lanatus (Arthropoda), Tisbe sp. (Arthropoda), Acarothrix sp. (Arthropoda), Simognathus sp. (Arthropoda), Halacarellus sp. (Arthropoda), Kotoracythere inconspicua (Arthropoda), uncultured eukaryote sq397432 (Arthropoda), Spinileberis quadriaculeata (Arthropoda), Microcaeculus sp. (Arthropoda), Copidognathus sp. (Arthropoda), Hirsutocythere hanaii (Arthropoda), wasp metagenome (Arthropoda), [Candida] saitoana (Ascomycota), Humulus lupulus (Ascomycota), Saccharomyces uvarum (Ascomycota), Aspergillus cristatus (Ascomycota), Sugiyamaella lignohabitans (Ascomycota), Candida sophiae-reginae (Ascomycota), Cladosporium sp. (Ascomycota), Exophiala halophila (Ascomycota), Graminopassalora graminis (Ascomycota), Scheffersomyces coipomoensis (Ascomycota), Postia placenta (Basidiomycota), Trametes hirsuta (Basidiomycota), Rhodotorula sp. (Basidiomycota), Malassezia globosa (Basidiomycota), Wallemia sebi (Basidiomycota), Scleroderma laeve (Basidiomycota), Filobasidium floriforme (Basidiomycota), Cryptococcus sp. (Basidiomycota), Ustilago esculenta (Basidiomycota), Hexagonia hirta (Basidiomycota), uncultured eukaryote sq279935 (Basidiomycota), Amylostereum laevigatum (Basidiomycota), metagenome (Basidiomycota), Boletellus shichianus (Basidiomycota), Rhodotorula toruloides (Basidiomycota), Bitectipora retepora (Bryozoa), Fenestrulina sp. (Bryozoa), metagenome (Centrohelida), uncultured marine sq15485 (Cercozoa), Paradinium poucheti (Cercozoa), Haplosporidian parasite (Cercozoa), Gromia oviformis (Cercozoa), uncultured eukaryote sq2529 (Cercozoa), uncultured marine sq32863 (Cercozoa), uncultured eukaryote sq66890 (Cercozoa), uncultured marine sq403545 (Cercozoa), uncultured eukaryote sq6496 (Cercozoa), Allas diplophysa (Cercozoa), Cercozoa sp. (Cercozoa), Paulinella chromatophora (Cercozoa), uncultured marine sq404593 (Cercozoa), metagenome (Cercozoa), uncultured marine sq404598 (Cercozoa), uncultured eukaryote sq405081 (Cercozoa), Nuclearia-like filose (Cercozoa), marine metagenome (Cercozoa), uncultured marine sq405741 (Cercozoa), uncultured marine sq405742 (Cercozoa), uncultured marine sq405986 (Cercozoa), uncultured marine sq405993 (Cercozoa), uncultured marine sq406001 (Cercozoa), uncultured marine sq62517 (Cercozoa), uncultured marine sq405866 (Cercozoa), uncultured eukaryote sq408181 (Cercozoa), uncultured marine sq408183 (Cercozoa), uncultured marine sq408190 (Cercozoa), uncultured marine sq408194 (Cercozoa), Micrometopion nutans (Cercozoa), uncultured eukaryote sq408198 (Cercozoa), uncultured marine sq408199 (Cercozoa), uncultured marine sq408201 (Cercozoa), uncultured marine sq415588 (Cercozoa), uncultured marine sq415617 (Cercozoa), uncultured marine sq415663 (Cercozoa), uncultured marine sq415729 (Cercozoa), uncultured marine sq415736 (Cercozoa), uncultured marine sq415740 (Cercozoa), uncultured marine sq418776 (Cercozoa), uncultured marine sq418788 (Cercozoa), uncultured marine sq418805 (Cercozoa), uncultured marine sq418812 (Cercozoa), uncultured marine sq418864 (Cercozoa), uncultured marine sq418877 (Cercozoa), uncultured marine sq418888 (Cercozoa), uncultured marine sq418900 (Cercozoa), uncultured marine sq418907 (Cercozoa), uncultured marine sq418908 (Cercozoa), uncultured marine sq418909 (Cercozoa), uncultured marine sq418945 (Cercozoa), uncultured marine sq418952 (Cercozoa), uncultured eukaryote sq418953 (Cercozoa), uncultured marine sq418982 (Cercozoa), uncultured marine sq419006 (Cercozoa), uncultured marine sq419010 (Cercozoa), Paradinium sp. (Cercozoa), uncultured marine sq419026 (Cercozoa), uncultured marine sq419028 (Cercozoa), uncultured marine sq419041 (Cercozoa), uncultured marine sq419046 (Cercozoa), uncultured marine sq419048 (Cercozoa), uncultured marine sq419049 (Cercozoa), Mataza hastifera (Cercozoa), uncultured marine sq419073 (Cercozoa), uncultured marine sq419076 (Cercozoa), uncultured eukaryote sq419083 (Cercozoa), uncultured marine sq419102 (Cercozoa), uncultured marine sq419104 (Cercozoa), Protogastrostyla sterkii (Ciliophora), Mesanophrys carcini (Ciliophora), Zoothamnium ignavum (Ciliophora), Protocruzia adherens (Ciliophora), uncultured eukaryote sq2287 (Ciliophora), Licnophora cf. (Ciliophora), Vorticella sp. (Ciliophora), Porpostoma notata (Ciliophora), Euplotes sp. (Ciliophora), Aspidisca hongkongensis (Ciliophora), uncultured eukaryote sq30387 (Ciliophora), Pseudoamphisiella quadrinucleata (Ciliophora), Diophrys parappendiculata (Ciliophora), Euplotes sinicus (Ciliophora), Trachelostyla pediculiformis (Ciliophora), Gymnodinioides sp. (Ciliophora), metagenome (Ciliophora), uncultured eukaryote sq405731 (Ciliophora), uncultured eukaryote sq405774 (Ciliophora), Strombidium sulcatum (Ciliophora), Vaginicola sp. (Ciliophora), Amphileptus spiculatus (Ciliophora), Arcuseries petzi (Ciliophora), Diophrys apoligothrix (Ciliophora), Diophrys oligothrix (Ciliophora), uncultured eukaryote sq415566 (Ciliophora), Stichotricha aculeata (Ciliophora), Astrangia poculata (Cnidaria), Acropora tortuosa (Cnidaria), Bougainvillia carolinensis (Cnidaria), Euphyllia glabrescens (Cnidaria), Stephanocoenia intersepta (Cnidaria), Hydractinia sp. (Cnidaria), Corydendrium sp. (Cnidaria), Billardia subrufa (Cnidaria), uncultured eukaryote sq415787 (Cnidaria), Navicula arenaria (Diatomea), uncultured eukaryote sq198850 (Diatomea), Psammodictyon constrictum (Diatomea), uncultured eukaryote sq6222 (Diatomea), Protokeelia bassonii (Diatomea), uncultured eukaryote sq152348 (Diatomea), uncultured marine sq6590 (Diatomea), uncultured stramenopile sq402684 (Diatomea), uncultured marine sq267941 (Diatomea), uncultured eukaryote sq402676 (Diatomea), uncultured marine sq305339 (Diatomea), uncultured stramenopile sq71371 (Diatomea), uncultured marine sq206365 (Diatomea), uncultured eukaryote sq152458 (Diatomea), uncultured eukaryote sq402670 (Diatomea), uncultured marine sq402720 (Diatomea), uncultured marine sq402712 (Diatomea), Bacillaria sp. (Diatomea), Bacillariophyta sp. (Diatomea), uncultured eukaryote sq206394 (Diatomea), uncultured stramenopile sq402747 (Diatomea), Nitzschia sp. (Diatomea), uncultured eukaryote sq402786 (Diatomea), Craticula pseudocitrus (Diatomea), Haslea ostrearia (Diatomea), uncultured marine sq60591 (Diatomea), Pleurosigma sp. (Diatomea), uncultured eukaryote sq52878 (Diatomea), Entomoneis sp. (Diatomea), uncultured stramenopile sq403015 (Diatomea), uncultured stramenopile sq152448 (Diatomea), uncultured marine sq403100 (Diatomea), uncultured eukaryote sq267631 (Diatomea), Cocconeis cf. (Diatomea), uncultured eukaryote sq403207 (Diatomea), uncultured marine sq402901 (Diatomea), uncultured stramenopile sq142135 (Diatomea), Haslea spicula (Diatomea), uncultured marine sq403316 (Diatomea), uncultured marine sq186955 (Diatomea), uncultured eukaryote sq403281 (Diatomea), uncultured marine sq403381 (Diatomea), uncultured eukaryote sq403385 (Diatomea), uncultured stramenopile sq206434 (Diatomea), uncultured eukaryote sq268651 (Diatomea), uncultured eukaryote sq345551 (Diatomea), uncultured stramenopile sq403231 (Diatomea), uncultured stramenopile sq403435 (Diatomea), uncultured Minutocellus sq3 (Diatomea), Cylindrotheca fusiformis (Diatomea), uncultured marine sq305421 (Diatomea), Amphora laevis (Diatomea), uncultured marine sq403542 (Diatomea), uncultured marine sq45551 (Diatomea), uncultured eukaryote sq403660 (Diatomea), uncultured stramenopile sq152522 (Diatomea), uncultured stramenopile sq402770 (Diatomea), Pseudogomphonema sp. (Diatomea), Halamphora costata (Diatomea), uncultured marine sq403806 (Diatomea), uncultured marine sq403809 (Diatomea), uncultured marine sq152470 (Diatomea), Odontella aurita (Diatomea), Nitzschia sigma (Diatomea), uncultured marine sq403998 (Diatomea), Seminavis sp. (Diatomea), uncultured marine sq404007 (Diatomea), Bacillaria paxillifer (Diatomea), uncultured eukaryote sq141758 (Diatomea), uncultured eukaryote sq206444 (Diatomea), uncultured stramenopile sq258318 (Diatomea), uncultured eukaryote sq403910 (Diatomea), Amphora cf. (Diatomea), uncultured stramenopile sq199403 (Diatomea), uncultured eukaryote sq404503 (Diatomea), Stauroneis kriegeri (Diatomea), uncultured stramenopile sq404590 (Diatomea), uncultured stramenopile sq404591 (Diatomea), Hyalosira sp. (Diatomea), Amphora proteus (Diatomea), uncultured marine sq311723 (Diatomea), uncultured eukaryote sq402828 (Diatomea), uncultured marine sq404213 (Diatomea), uncultured marine sq404928 (Diatomea), uncultured stramenopile sq404930 (Diatomea), uncultured stramenopile sq404932 (Diatomea), Rossia sp. (Diatomea), Paralia sulcata (Diatomea), uncultured marine sq404949 (Diatomea), uncultured eukaryote sq404950 (Diatomea), uncultured eukaryote sq405073 (Diatomea), uncultured marine sq405078 (Diatomea), uncultured eukaryote sq405085 (Diatomea), uncultured marine sq123982 (Diatomea), Planothidium frequentissimum (Diatomea), uncultured marine sq405009 (Diatomea), uncultured marine sq405723 (Diatomea), uncultured marine sq405725 (Diatomea), Nitzschia longissima (Diatomea), uncultured stramenopile sq405744 (Diatomea), uncultured stramenopile sq405745 (Diatomea), uncultured marine sq405982 (Diatomea), uncultured marine sq405985 (Diatomea), uncultured marine sq405988 (Diatomea), uncultured eukaryote sq319063 (Diatomea), uncultured eukaryote sq405241 (Diatomea), uncultured eukaryote sq405526 (Diatomea), uncultured marine sq407512 (Diatomea), uncultured marine sq407513 (Diatomea), uncultured eukaryote sq407517 (Diatomea), uncultured eukaryote sq407520 (Diatomea), uncultured stramenopile sq407521 (Diatomea), Catenulaceae sp. (Diatomea), uncultured stramenopile sq407571 (Diatomea), uncultured eukaryote sq407572 (Diatomea), uncultured marine sq408159 (Diatomea), uncultured stramenopile sq408163 (Diatomea), uncultured marine sq408164 (Diatomea), uncultured marine sq408165 (Diatomea), Eunotogramma laevis (Diatomea), uncultured marine sq30341 (Diatomea), uncultured eukaryote sq53564 (Diatomea), uncultured eukaryote sq56750 (Diatomea), uncultured eukaryote sq166924 (Diatomea), uncultured marine sq182745 (Diatomea), uncultured eukaryote sq259919 (Diatomea), uncultured stramenopile sq298670 (Diatomea), Navicula salinicola (Diatomea), uncultured eukaryote sq317885 (Diatomea), uncultured marine sq320325 (Diatomea), uncultured marine sq322396 (Diatomea), uncultured stramenopile sq324419 (Diatomea), uncultured eukaryote sq327263 (Diatomea), uncultured marine sq382306 (Diatomea), uncultured stramenopile sq405836 (Diatomea), uncultured marine sq406231 (Diatomea), uncultured stramenopile sq407043 (Diatomea), uncultured marine sq415470 (Diatomea), Tryblionella apiculata (Diatomea), uncultured stramenopile sq415501 (Diatomea), uncultured marine sq415504 (Diatomea), uncultured stramenopile sq415505 (Diatomea), uncultured stramenopile sq415508 (Diatomea), uncultured eukaryote sq415513 (Diatomea), uncultured eukaryote sq415514 (Diatomea), uncultured eukaryote sq415515 (Diatomea), uncultured eukaryote sq415518 (Diatomea), uncultured eukaryote sq415523 (Diatomea), uncultured stramenopile sq415525 (Diatomea), uncultured eukaryote sq415529 (Diatomea), Thalassiosira delicatula (Diatomea), uncultured marine sq415589 (Diatomea), uncultured eukaryote sq415670 (Diatomea), uncultured eukaryote sq415704 (Diatomea), uncultured eukaryote sq415712 (Diatomea), uncultured eukaryote sq415725 (Diatomea), uncultured marine sq415728 (Diatomea), uncultured eukaryote sq415739 (Diatomea), Nitzschia communis (Diatomea), uncultured stramenopile sq415767 (Diatomea), uncultured stramenopile sq415768 (Diatomea), uncultured stramenopile sq415771 (Diatomea), uncultured marine sq415772 (Diatomea), Nitzschia filiformis (Diatomea), uncultured marine sq418786 (Diatomea), uncultured marine sq418806 (Diatomea), uncultured marine sq418808 (Diatomea), uncultured stramenopile sq418815 (Diatomea), uncultured marine sq418818 (Diatomea), uncultured marine sq418830 (Diatomea), uncultured stramenopile sq418832 (Diatomea), uncultured stramenopile sq418833 (Diatomea), uncultured marine sq418834 (Diatomea), uncultured marine sq418835 (Diatomea), Pseudo-nitzschia pungens (Diatomea), uncultured marine sq418846 (Diatomea), Asterionella glacialis (Diatomea), uncultured marine sq418850 (Diatomea), uncultured marine sq418851 (Diatomea), uncultured eukaryote sq418853 (Diatomea), uncultured stramenopile sq418854 (Diatomea), uncultured marine sq418884 (Diatomea), uncultured marine sq418914 (Diatomea), uncultured marine sq418969 (Diatomea), uncultured eukaryote sq418981 (Diatomea), uncultured eukaryote sq418998 (Diatomea), uncultured eukaryote sq419001 (Diatomea), Navicula vara (Diatomea), uncultured eukaryote sq419033 (Diatomea), Nitzschia amphibia (Diatomea), uncultured marine sq419036 (Diatomea), uncultured stramenopile sq419037 (Diatomea), uncultured eukaryote sq419042 (Diatomea), uncultured marine sq419055 (Diatomea), uncultured marine sq419058 (Diatomea), uncultured marine sq419079 (Diatomea), uncultured eukaryote sq419095 (Diatomea), uncultured marine sq419103 (Diatomea), uncultured eukaryote sq206378 (Dinoflagellata), Symbiodinium sp. (Dinoflagellata), uncultured eukaryote sq1085 (Dinoflagellata), Symbiodinium minutum (Dinoflagellata), uncultured alveolate sq362721 (Dinoflagellata), uncultured eukaryote sq406008 (Dinoflagellata), Amphidinium sp. (Dinoflagellata), uncultured eukaryote sq407534 (Dinoflagellata), uncultured eukaryote sq408171 (Dinoflagellata), Symbiodinium microadriaticum (Dinoflagellata), uncultured eukaryote sq415556 (Dinoflagellata), uncultured eukaryote sq415571 (Dinoflagellata), Protodinium simplex (Dinoflagellata), uncultured eukaryote sq415581 (Dinoflagellata), Polarella glacialis (Dinoflagellata), uncultured eukaryote sq415587 (Dinoflagellata), uncultured eukaryote sq415590 (Dinoflagellata), uncultured eukaryote sq415657 (Dinoflagellata), uncultured eukaryote sq415757 (Dinoflagellata), uncultured eukaryote sq415955 (Dinoflagellata), uncultured eukaryote sq418879 (Dinoflagellata), uncultured eukaryote sq418880 (Dinoflagellata), uncultured eukaryote sq419097 (Dinoflagellata), Diplonema sp. (Euglenozoa), uncultured eukaryote sq403659 (Euglenozoa), Rhynchopus sp. (Euglenozoa), Diplonemida sp. (Euglenozoa), Diplonemida gen. (Euglenozoa), uncultured eukaryote sq32619 (Eukaryota), Phaeophila dendroides (Eukaryota), uncultured eukaryote sq1494 (Eukaryota), Ulvella repens (Eukaryota), Halothrix ambigua (Eukaryota), Ulvella viridis (Eukaryota), Paraphysomonas imperforata (Eukaryota), Paraphysomonas foraminifera (Eukaryota), Didymoeca costata (Eukaryota), Smithsoniella earleae (Eukaryota), Picochlorum eukaryotum (Eukaryota), Goniomonas aff. (Eukaryota), Ectocarpus siliculosus (Eukaryota), Akkesiphycus lubricum (Eukaryota), uncultured eukaryote sq60639 (Eukaryota), Cladophora socialis (Eukaryota), Stephanoeca diplocostata (Eukaryota), Paramoeba branchiphila (Eukaryota), Asterocladon interjectum (Eukaryota), Paraflabellula hoguae (Eukaryota), uncultured eukaryote sq404587 (Eukaryota), uncultured eukaryote sq124211 (Eukaryota), uncultured eukaryote sq182312 (Eukaryota), Desmarestia viridis (Eukaryota), uncultured eukaryote sq405074 (Eukaryota), Prasinoderma coloniale (Eukaryota), uncultured eukaryote sq405088 (Eukaryota), uncultured eukaryote sq124 (Eukaryota), Scytosiphon lomentaria (Eukaryota), Lychaete ohkuboana (Eukaryota), Ulvaria splendens (Eukaryota), uncultured eukaryote sq405996 (Eukaryota), Pseudulvella consociata (Eukaryota), Lychaete sakaii (Eukaryota), Ulothrix sp. (Eukaryota), Monostroma grevillei (Eukaryota), uncultured eukaryote sq408179 (Eukaryota), uncultured eukaryote sq408185 (Eukaryota), Ruthnielsenia tenuis (Eukaryota), Lessonia variegata (Eukaryota), Padina sp. (Eukaryota), uncultured eukaryote sq415640 (Eukaryota), Ulvophyceae sp. (Eukaryota), Gloeotilopsis planctonica (Eukaryota), Dictyopteris acrosticoides (Eukaryota), uncultured eukaryote sq418781 (Eukaryota), uncultured Chrysophyceae sq418801 (Eukaryota), eukaryotic picoplankton (Eukaryota), uncultured eukaryote sq418856 (Eukaryota), uncultured eukaryote sq418929 (Eukaryota), uncultured eukaryote sq418956 (Eukaryota), Ulvella bullata (Eukaryota), uncultured Dunaliellaceae sq419017 (Eukaryota), uncultured eukaryote sq419081 (Eukaryota), Peyssonnelia novae-hollandiae (Florideophycidae), uncultured Corallinales sq32421 (Florideophycidae), Renouxia sp. (Florideophycidae), Gastroclonium pacificum (Florideophycidae), uncultured Corallinales sq44499 (Florideophycidae), uncultured Corallinales sq32406 (Florideophycidae), Peyssonnelia capensis (Florideophycidae), uncultured Corallinales sq21317 (Florideophycidae), Corallinales sp. (Florideophycidae), uncultured Corallinales sq52775 (Florideophycidae), Peyssonnelia sp. (Florideophycidae), uncultured Corallinales sq402879 (Florideophycidae), Cordylecladia erecta (Florideophycidae), uncultured Corallinales sq402971 (Florideophycidae), Kraftia dichotoma (Florideophycidae), uncultured Corallinales sq314848 (Florideophycidae), uncultured Corallinales sq314659 (Florideophycidae), uncultured Corallinales sq329219 (Florideophycidae), uncultured Corallinales sq258406 (Florideophycidae), Melobesioideae sp. (Florideophycidae), uncultured Corallinales sq152417 (Florideophycidae), Rhodopeltis borealis (Florideophycidae), uncultured Corallinales sq280124 (Florideophycidae), uncultured Corallinales sq403526 (Florideophycidae), uncultured Corallinales sq124329 (Florideophycidae), Caloglossa cf. (Florideophycidae), uncultured Corallinales sq403762 (Florideophycidae), uncultured Corallinales sq403938 (Florideophycidae), Synarthrophyton patena (Florideophycidae), uncultured Corallinales sq318089 (Florideophycidae), uncultured Corallinales sq404190 (Florideophycidae), uncultured Corallinales sq318090 (Florideophycidae), Polyopes tenuis (Florideophycidae), uncultured Corallinales sq404519 (Florideophycidae), uncultured Corallinales sq404961 (Florideophycidae), Antithamnion aglandum (Florideophycidae), Bonnemaisonia clavata (Florideophycidae), uncultured Corallinales sq405752 (Florideophycidae), uncultured Corallinales sq405758 (Florideophycidae), Gloiopeltis furcata (Florideophycidae), uncultured Corallinales sq405765 (Florideophycidae), uncultured Corallinales sq405768 (Florideophycidae), Dichotomaria marginata (Florideophycidae), Metamastophora flabellata (Florideophycidae), uncultured Corallinales sq407555 (Florideophycidae), uncultured Corallinales sq407585 (Florideophycidae), Calliblepharis celatospora (Florideophycidae), uncultured Corallinales sq407607 (Florideophycidae), uncultured Corallinales sq407619 (Florideophycidae), Ellisolandia elongata (Florideophycidae), uncultured Corallinales sq407623 (Florideophycidae), uncultured Corallinales sq407628 (Florideophycidae), uncultured Corallinales sq407634 (Florideophycidae), uncultured Corallinales sq407637 (Florideophycidae), uncultured Corallinales sq142157 (Florideophycidae), uncultured Corallinales sq147857 (Florideophycidae), uncultured Corallinales sq327382 (Florideophycidae), uncultured eukaryote sq333912 (Florideophycidae), Pachymenia cf. (Florideophycidae), uncultured Corallinales sq415520 (Florideophycidae), uncultured Corallinales sq415592 (Florideophycidae), uncultured Corallinales sq415621 (Florideophycidae), uncultured Corallinales sq415622 (Florideophycidae), uncultured Corallinales sq415808 (Florideophycidae), Ceramium rubrum (Florideophycidae), uncultured Corallinales sq415833 (Florideophycidae), uncultured Corallinales sq415863 (Florideophycidae), Dumontia simplex (Florideophycidae), uncultured Corallinales sq415913 (Florideophycidae), Ramicrusta textilis (Florideophycidae), uncultured Corallinales sq415918 (Florideophycidae), uncultured Corallinales sq415930 (Florideophycidae), uncultured Corallinales sq415931 (Florideophycidae), uncultured Corallinales sq415935 (Florideophycidae), uncultured Corallinales sq415936 (Florideophycidae), uncultured Corallinales sq415938 (Florideophycidae), uncultured Corallinales sq415939 (Florideophycidae), uncultured Corallinales sq415943 (Florideophycidae), Cheilosporum cultratum (Florideophycidae), uncultured Corallinales sq415946 (Florideophycidae), uncultured Corallinales sq415948 (Florideophycidae), uncultured Corallinales sq415949 (Florideophycidae), uncultured Corallinales sq415950 (Florideophycidae), uncultured Corallinales sq415964 (Florideophycidae), uncultured Corallinales sq415977 (Florideophycidae), uncultured Corallinales sq415979 (Florideophycidae), uncultured Corallinales sq415983 (Florideophycidae), uncultured Corallinales sq415986 (Florideophycidae), uncultured Corallinales sq415997 (Florideophycidae), uncultured Corallinales sq415998 (Florideophycidae), uncultured Corallinales sq415999 (Florideophycidae), uncultured Corallinales sq416000 (Florideophycidae), uncultured Corallinales sq416001 (Florideophycidae), uncultured Corallinales sq416027 (Florideophycidae), uncultured eukaryote sq416029 (Florideophycidae), uncultured Corallinales sq416031 (Florideophycidae), uncultured Corallinales sq419064 (Florideophycidae), Chaetonotus sp. (Gastrotricha), Chaetonotus neptuni (Gastrotricha), uncultured microeukaryote sq52945 (Incertae_Sedis), Pirsonia verrucosa (Incertae_Sedis), Oblongichytrium sp. (Labyrinthulomycetes), uncultured eukaryote sq72 (Labyrinthulomycetes), Thraustochytriidae sp. (Labyrinthulomycetes), Schizochytrium minutum (Labyrinthulomycetes), Stellarchytrium dubum (Labyrinthulomycetes), uncultured eukaryote sq67219 (Labyrinthulomycetes), labyrinthulid quahog (Labyrinthulomycetes), uncultured eukaryote sq47361 (Labyrinthulomycetes), uncultured eukaryote sq2132 (Labyrinthulomycetes), uncultured eukaryote sq1285 (Labyrinthulomycetes), uncultured eukaryote sq4861 (Labyrinthulomycetes), Thraustochytrium multirudimentale (Labyrinthulomycetes), Thraustochytrium pachydermum (Labyrinthulomycetes), Thraustochytrium sp. (Labyrinthulomycetes), Aplanochytrium blankum (Labyrinthulomycetes), uncultured eukaryote sq111672 (Labyrinthulomycetes), uncultured eukaryote sq403457 (Labyrinthulomycetes), uncultured eukaryote sq222516 (Labyrinthulomycetes), uncultured eukaryote sq403543 (Labyrinthulomycetes), unidentified (Labyrinthulomycetes), uncultured marine sq404003 (Labyrinthulomycetes), uncultured stramenopile sq404005 (Labyrinthulomycetes), uncultured eukaryote sq1117 (Labyrinthulomycetes), uncultured eukaryote sq2458 (Labyrinthulomycetes), Labyrinthuloides minuta (Labyrinthulomycetes), uncultured eukaryote sq71955 (Labyrinthulomycetes), uncultured eukaryote sq405739 (Labyrinthulomycetes), uncultured eukaryote sq405995 (Labyrinthulomycetes), Aplanochytrium stocchinoi (Labyrinthulomycetes), uncultured eukaryote sq135197 (Labyrinthulomycetes), uncultured marine sq258699 (Labyrinthulomycetes), uncultured eukaryote sq407561 (Labyrinthulomycetes), uncultured eukaryote sq407641 (Labyrinthulomycetes), uncultured marine sq265464 (Labyrinthulomycetes), uncultured eukaryote sq415478 (Labyrinthulomycetes), uncultured eukaryote sq415628 (Labyrinthulomycetes), uncultured eukaryote sq415629 (Labyrinthulomycetes), uncultured marine sq415636 (Labyrinthulomycetes), uncultured eukaryote sq415642 (Labyrinthulomycetes), uncultured eukaryote sq416006 (Labyrinthulomycetes), uncultured eukaryote sq418807 (Labyrinthulomycetes), uncultured eukaryote sq418923 (Labyrinthulomycetes), uncultured stramenopile sq418971 (Labyrinthulomycetes), uncultured marine sq418973 (Labyrinthulomycetes), uncultured marine sq418985 (Labyrinthulomycetes), Turbo cornutus (Mollusca), Monhysteridae environmental (Nematozoa), Phanoderma sp. (Nematozoa), uncultured eukaryote sq305084 (Nematozoa), Chromadorita leuckarti (Nematozoa), Choriorhabditis cristata (Nematozoa), Punctodora ratzeburgensis (Nematozoa), Thoracostomopsis sp. (Nematozoa), metagenome (Peronosporomycetes), Halodaphnea panulirata (Peronosporomycetes), Haliphthoros sp. (Peronosporomycetes), Festuca arundinacea (Phragmoplastophyta), Erythranthe guttata (Phragmoplastophyta), Phaseoleae environmental (Phragmoplastophyta), Triticum aestivum (Phragmoplastophyta), Spirastrella sp. (Porifera), uncultured eukaryote sq402695 (Protalveolata), uncultured eukaryote sq135208 (Protalveolata), uncultured marine sq268951 (Protalveolata), uncultured marine sq406010 (Protalveolata), uncultured marine sq418882 (Protalveolata), uncultured eukaryote sq419027 (Protalveolata), Pseudohaptolina sorokinii (Prymnesiophyceae), uncultured eukaryote sq415730 (Prymnesiophyceae)

Complete List of Microbes Identified

This list includes all microbes (Bacteria & Archae) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Unclassified Hyphomicrobiaceae 1489, Hirschia baltica, Unclassified Bacteria 14516, Unclassified Hyphomicrobiaceae 273, Unclassified Bacteria 99585, Microbulbifer sp., Clostridium sp., Unclassified Bacteria 46552, Unclassified Bacteria 99481, Unclassified Bacteria 12276, Unclassified Bacteria 62059, Nitrosopumilus sp., Unclassified Coxiellaceae 66757, Unclassified Desulfobacteraceae 122783, Unclassified Bacteria 9720, Unclassified Bacteria 949, Unclassified Bacteria 128, Unclassified Kordiimonadaceae 248141, Unclassified Bacteria 16461, Unclassified Legionellaceae 117825, Unclassified Pirellulaceae 109571, Unclassified Alteromonadaceae 248123, Unclassified Hyphomicrobiaceae 85006, Unclassified Lachnospiraceae 110487, Inquilinus sp., Unclassified Lachnospiraceae 265305, Mycobacterium sp., Unclassified Bacteria 27068, Unclassified Bacteria 14140, Unclassified Bacteria 791, Unclassified Bacteria 26048, Unclassified Coxiellaceae 67696, Devosia sp., BD2-13 sp., Unclassified Desulfovibrionaceae 58232, Unclassified Bacteria 2905, Unclassified Desulfovibrionaceae 96, Unclassified Rhodospirillaceae 56009, Unclassified Bacteria 36003, Unclassified Ulvophyceae 265317, Unclassified Bacteria 112663, Unclassified Bacteria 10205, Roseivirga sp., Unclassified Bacteria 81095, Desulfococcus sp., Unclassified Bacteria 6756, Desulfofrigus sp., Unclassified Bacteria 113737, Unclassified Micrococcaceae 154916, Unclassified Piscirickettsiaceae 265327, Unclassified Coxiellaceae 34854, Unclassified Bacteria 265334, Bacteriovorax sp., Unclassified Rhodothermaceae 171105, Unclassified Haliangiaceae 201401, Unclassified Pirellulaceae 248154, Unclassified Bacteria 14362, Unclassified Bacteria 2964, Unclassified Bacteria 5366, Unclassified Piscirickettsiaceae 88224, Unclassified Desulfobulbaceae 265339, Unclassified Bacteria 11773, Unclassified Bacteria 218749, Unclassified Rhodospirillaceae 226549, Unclassified Bacteria 1141, Unclassified Rhodobacteraceae 102, Unclassified Pirellulaceae 201891, Candidatus sp., Unclassified [Amoebophilaceae] 1322, Unclassified Hyphomicrobiaceae 9812, Unclassified Bacteria 114521, Unclassified Desulfobacteraceae 247605, Unclassified Saprospiraceae 1666, Unclassified koll13 10449, Unclassified Bacteria 55094, Unclassified Methylophilaceae 392, Staphylococcus aureus, Unclassified Bacteria 1394, Unclassified JdFBGBact 1704, Unclassified Piscirickettsiaceae 107003, Unclassified Bacteria 107218, Unclassified [Entotheonellaceae] 265373, Unclassified Coxiellaceae 2257, Unclassified Bacteria 5265, Unclassified Bacteria 40348, Unclassified Pirellulaceae 248201, Unclassified Bacteria 265381, Unclassified Rhodobacteraceae 226, Unclassified Bacteria 994, Unclassified Pirellulaceae 25805, Unclassified Desulfobacteraceae 67454, Unclassified Ectothiorhodospiraceae 106525, Unclassified Bacteria 139976, Unclassified Desulfobacteraceae 244807, Unclassified Phyllobacteriaceae 1255, Glaciecola sp., Unclassified Bacteria 3485, Unclassified Bacteria 122870, Unclassified Bacteria 140057, Unclassified Bacteria 244873, Unclassified Bacteria 4275, Unclassified Bacteria 14665, Unclassified Bacteria 81816, Unclassified Pirellulaceae 103325, Unclassified Bacteria 122542, Unclassified Bacteria 164250, Unclassified Bacteria 265404, Arcobacter sp., Unclassified Bacteria 627, Unclassified Bacteria 2627, Unclassified Desulfobulbaceae 265420, Unclassified Victivallaceae 3086, Unclassified Bacteria 55344, Unclassified Bacteria 113838, Unclassified Bacteria 218804, Unclassified Bacteria 265432, Unclassified Hyphomicrobiaceae 104, HTCC sp., Unclassified Hyphomicrobiaceae 14871, Unclassified Bacteria 15440, Unclassified Hyphomicrobiaceae 32345, Facklamia sp., Unclassified Piscirickettsiaceae 106986, Unclassified Colwelliaceae 164282, Unclassified Bacteria 265446, Unclassified Rhodobacteraceae 265447, Unclassified Bacteria 265448, Unclassified Piscirickettsiaceae 265449, Unclassified Bacteria 265465, Planctomyces sp., Ucs1325 sp., Unclassified Bacteria 37473, Unclassified Bacteria 61944, Unclassified Bacteria 106949, Unclassified Piscirickettsiaceae 167040, Unclassified Bacteria 195116, Unclassified Coxiellaceae 265304, Unclassified Bacteria 265472, Unclassified Desulfobulbaceae 265473, Unclassified Bacteria 265489, Unclassified Micrococcaceae 265490, Unclassified Hyphomicrobiaceae 2139, Coraliomargarita sp., Unclassified Phyllobacteriaceae 43318, Unclassified Piscirickettsiaceae 106888, Unclassified Pseudanabaenaceae 165659, Oleibacter sp., Unclassified Pseudanabaenaceae 265496, Unclassified Desulfobacteraceae 265499, Unclassified koll13 265500, Pseudoalteromonas sp., Unclassified Flavobacteriaceae 25319, Unclassified Xenococcaceae 43853, Unclassified JdFBGBact 189213, Unclassified Bacteria 265519, Unclassified Hyphomonadaceae 290, Unclassified HTCC2089 909, Unclassified Bacteria 1173, Brevibacterium sp., Unclassified Bacteria 14991, Unclassified Bacteriovoracaceae 67740, Unclassified Bacteria 156091, Unclassified Cenarchaeaceae 248126, Marinobacter sp., Vibrio sp., Unclassified Lachnospiraceae 265587, Unclassified Saprospiraceae 364, Unclassified Bacteria 1800, Nautella sp., Unclassified Bacteria 122846, Unclassified Rhodobacteraceae 248653, Unclassified Bacteria 265593, Unclassified Bacteria 265594, Unclassified Rhodobacteraceae 265595, Unclassified Coxiellaceae 265632, Unclassified Bacteria 30, Francisella sp., Unclassified Oleiphilaceae 450, Unclassified Bacteria 668, Unclassified Hyphomicrobiaceae 955, Unclassified Bacteria 2726, Unclassified Hyphomicrobiaceae 4661, Unclassified Ulvophyceae 5177, Unclassified Flammeovirgaceae 5836, Unclassified Bacteria 12848, Unclassified Phyllobacteriaceae 26544, Unclassified Hyphomicrobiaceae 87949, Unclassified Bacteria 99835, Vogesella sp., Desulfosarcina sp., Unclassified Bacteria 236629, Unclassified Bacteria 265643, Unclassified Bacteria 265644, Unclassified Bacteria 265682, Unclassified Bacteria 265685, Unclassified Phyllobacteriaceae 9875, Pseudomonas sp., Unclassified Kordiimonadaceae 26208, Unclassified Alteromonadaceae 37645, Mycoplasma sp., Unclassified Bacteria 235108, Unclassified Bacteria 265697, Unclassified Bacteria 265698, Hyphomicrobium sp., Unclassified Dietziaceae 265752, Unclassified Oleiphilaceae 175, Unclassified Bacteria 359, Unclassified Alteromonadaceae 1132, Unclassified Flammeovirgaceae 9944, Unclassified Bacteria 26590, Unclassified Rhodothermaceae 36251, Unclassified Bacteria 93580, Unclassified Bacteria 93585, Unclassified Cryomorphaceae 169012, Unclassified Criblamydiaceae 248235, Unclassified Bacteria 265764, Unclassified Rhodospirillaceae 265765, Unclassified Bacteria 265766, Unclassified Bacteria 265821, Unclassified Legionellaceae 792, Unclassified Bacteria 1347, Unclassified Thiotrichaceae 2253, Unclassified Nitrospiraceae 2912, Photobacterium sp., Unclassified Bacteria 10928, Unclassified Flavobacteriaceae 30383, Unclassified Bacteria 43492, Unclassified Bacteria 189608, Cellulomonas sp., Unclassified Bacteria 258163, Unclassified Bacteria 265836, Unclassified Bacteria 265837, Unclassified Bacteria 265838, Unclassified Bacteria 265925, Unclassified Bacteria 265927, Unclassified Bacteria 160, Unclassified Oceanospirillaceae 1096, Unclassified Bacteria 2828, Unclassified Bacteriovoracaceae 15743, Unclassified Saprospiraceae 52810, Agarivorans sp., Unclassified Rhodospirillaceae 86557, Unclassified [Acidaminobacteraceae] 256467, Unclassified Erythrobacteraceae 265954, Unclassified Pirellulaceae 266048, Unclassified Bacteria 266054, Maricaulis sp., Unclassified Bradyrhizobiaceae 1033, Unclassified Alteromonadaceae 15427, Unclassified Alteromonadaceae 16244, Curtobacterium sp., Unclassified Rhodospirillaceae 55070, Unclassified Bacteria 63333, Unclassified Haloplasmataceae 71072, Unclassified Bacteria 84523, Unclassified Legionellaceae 134085, Aquimarina sp., Unclassified Bacteria 266081, Unclassified Bacteria 266082, Unclassified Rhodospirillaceae 266083, Unclassified Piscirickettsiaceae 266085, Unclassified Bacteria 266220, Unclassified Bacteria 266222, Unclassified Rhodobacteraceae 266223, Thalassomonas sp., Unclassified Bacteria 14, Unclassified Alteromonadaceae 88, Unclassified Phyllobacteriaceae 704, Marinicella sp., Unclassified Bacteria 3231, Unclassified Rhodobacteraceae 10157, Unclassified Rhodospirillaceae 10828, Unclassified Bacteria 10829, Unclassified Bacteria 10993, Unclassified Alteromonadaceae 28399, Unclassified Phyllobacteriaceae 31755, Unclassified Bacteria 58514, Unclassified Dermabacteraceae 212648, Unclassified Piscirickettsiaceae 223786, Unclassified Bacteria 266269, Unclassified Flavobacteriaceae 266273, Unclassified Phyllobacteriaceae 266275, Unclassified Bacteria 266478, Unclassified [Amoebophilaceae] 266488, Unclassified Kordiimonadaceae 48, Unclassified Bacteria 2629, Unclassified Bacteria 68413, Coxiella sp., Unclassified Flavobacteriaceae 122466, Unclassified Bacteria 137342, Unclassified Phyllobacteriaceae 200524, Unclassified Rhodospirillaceae 245341, Unclassified Desulfobacteraceae 266532, Unclassified Xenococcaceae 266534, Unclassified Flavobacteriaceae 266536, Unclassified Bacteria 266537, Unclassified Pirellulaceae 266813, Unclassified Bacteria 266819, Unclassified Rhodobacteraceae 266821, Unclassified Bacteria 266823, Unclassified Bacteria 1889, Unclassified Bacteria 26785, Unclassified Cenarchaeaceae 31721, Unclassified Bacteria 34937, Unclassified Bacteriovoracaceae 67948, Unclassified Xenococcaceae 266919, Unclassified Bacteria 266920, Unclassified Bacteria 266923, Unclassified Bacteria 266924, Unclassified Bacteria 266925, Unclassified Desulfobacteraceae 266927, Unclassified Flammeovirgaceae 266928, Unclassified Bacteria 266929, Unclassified Bacteria 267358, Unclassified Bacteria 267360, SC3-56 sp., Unclassified Rhodobacteraceae 41, Rhodococcus sp., Unclassified Kiloniellaceae 422, Unclassified Bacteria 15046, Unclassified Bacteria 137473, Unclassified Hyphomicrobiaceae 238277, Unclassified Bacteria 245015, Unclassified Oceanospirillaceae 265738, Unclassified Bacteria 267560, Unclassified Rhodospirillaceae 267561, Unclassified Rhodospirillaceae 267562, Unclassified Rhodospirillaceae 267563, Unclassified Bacteria 267565, Thalassospira sp., Unclassified Xenococcaceae 267568, Unclassified Xenococcaceae 267569, Unclassified Bacteria 267570, Unclassified Bacteria 267571, Unclassified Bacteria 267574, Unclassified Bacteria 267575, Unclassified Bacteria 267577, Unclassified Ectothiorhodospiraceae 267578, Unclassified Pirellulaceae 268215, Unclassified Rhodospirillaceae 268217, Unclassified Bacteria 268225, Unclassified Bacteria 268226, Unclassified Bacteria 268228, Unclassified Bacteria 268229, Unclassified Bacteria 268230, Unclassified Phyllobacteriaceae 268231, Unclassified Bacteria 268241, Unclassified Bacteria 268243, Unclassified Bacteria 268246, Unclassified Bacteria 268247, Unclassified Bacteria 268248, Unclassified Bacteria 268249, Olleya sp., Unclassified Bacteriovoracaceae 268261, Unclassified Dietziaceae 268266, Unclassified Bacteria 268269, Unclassified Hyphomicrobiaceae 2583, Unclassified Kordiimonadaceae 3562, Unclassified Bacteria 26818, Unclassified Bacteria 42593, Unclassified Pirellulaceae 56804, Unclassified Bacteriovoracaceae 93502, Unclassified Hyphomicrobiaceae 122371, Unclassified Bacteria 137350, Unclassified Phyllobacteriaceae 138308, Unclassified Bacteria 143443, Amphritea sp., Unclassified Oceanospirillaceae 170117, Unclassified Phyllobacteriaceae 171690, Unclassified Desulfobacteraceae 200056, Unclassified Oleiphilaceae 219369, Unclassified Bacteria 244804, Unclassified Desulfobacteraceae 250416, Unclassified Hyphomicrobiaceae 266685, Unclassified Hyphomicrobiaceae 267977, Unclassified Bacteria 268753, Unclassified Haliangiaceae 268754, Unclassified Haliangiaceae 268755, Unclassified Desulfobacteraceae 268756, Unclassified Pseudanabaenaceae 268760, Unclassified Bacteria 268764, Unclassified Bacteria 268765, Unclassified Rhodospirillaceae 268766, Unclassified Rhodospirillaceae 268767, Unclassified Bacteria 268768, Unclassified Coxiellaceae 268769, Unclassified Piscirickettsiaceae 268770, Unclassified Bacteria 268771, Unclassified Desulfobulbaceae 268772, Unclassified Bacteria 268773, Unclassified Bacteria 268774, Unclassified Bacteria 268775, Unclassified Hyphomicrobiaceae 268776, Unclassified Bacteria 268778, Unclassified Xenococcaceae 268787, Unclassified Erythrobacteraceae 268792, Unclassified Bacteria 268793, Unclassified Rhodospirillaceae 268794, Unclassified Bacteria 268796, Unclassified Bacteria 268797, Unclassified Bacteria 268798, Unclassified Bacteria 268799, Unclassified Bacteria 268800, Unclassified Bacteria 268801, Unclassified Bacteria 268802, Unclassified Bacteria 268805, Unclassified Bacteria 268808, Unclassified Bacteria 268809, Unclassified Bacteria 268810, Unclassified Bacteria 268812, Unclassified Bacteria 268819, Unclassified Bacteria 268820, Unclassified Bacteria 268821, Unclassified Bacteria 268825, Unclassified Rhodobacteraceae 268827, Unclassified Rhodobacteraceae 268828, Unclassified Rhodobacteraceae 268829, Unclassified Ectothiorhodospiraceae 268830, Unclassified Bacteria 268831, Unclassified Bacteria 268832, Unclassified Piscirickettsiaceae 268833, Unclassified Piscirickettsiaceae 268834, Unclassified Flammeovirgaceae 268835, Unclassified Desulfobulbaceae 268836, Unclassified Desulfobulbaceae 268837, Unclassified Rhodospirillaceae 268839, Unclassified Bacteria 268843, Unclassified Piscirickettsiaceae 268844, Unclassified Piscirickettsiaceae 268845, Unclassified Piscirickettsiaceae 268849, Unclassified Bacteria 268850, Unclassified Bacteria 268851, Unclassified Desulfobacteraceae 268853, Unclassified Hyphomicrobiaceae 268861, Unclassified Piscirickettsiaceae 268863, Unclassified Pirellulaceae 270722, Unclassified Coxiellaceae 270730, Unclassified Coxiellaceae 270731, Unclassified Legionellaceae 270746, Unclassified Bacteria 270748, Unclassified Bacteria 270749, Thalassospira xiamenensis, Unclassified Hyphomicrobiaceae 270758, Unclassified Bacteria 270769, Unclassified Bacteria 270772, Unclassified Bacteria 270773, Unclassified Bacteria 270774, Unclassified Bacteria 270776, Unclassified Bacteria 270784, Unclassified Erythrobacteraceae 270785, Unclassified Erythrobacteraceae 270786, Unclassified Kordiimonadaceae 270787, Unclassified Bacteria 270794, Unclassified Bacteria 270795, Unclassified Bacteria 270796, Unclassified Bacteria 270797, Unclassified Bacteria 270798, Unclassified Bacteria 270801, Unclassified Bacteria 270803, Unclassified Kordiimonadaceae 270804, Marivita sp., Unclassified Bacteria 270808, Microbulbifer elongatus, Unclassified Bacteria 270816, Unclassified Hyphomicrobiaceae 270827, Unclassified Bacteria 270828, Unclassified Alteromonadaceae 270829, Unclassified Alteromonadaceae 270830, Unclassified Bacteria 270833, Unclassified HTCC2089 270852, Staphylococcus sp., Unclassified Bacteria 270867, Unclassified HTCC2089 270873, Unclassified HTCC2089 270874, Unclassified Bacteria 270893, Unclassified Lachnospiraceae 270895, Corynebacterium sp., Unclassified Micrococcaceae 270904

DNA analysis conducted by AquaBiomics LLC.

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Change of Address

We have a New Shipping Address

We’ve changed our address for returning samples. Instead of a PO Box, we’re now receiving samples directly at the lab. This reduces delays and gets your samples into our hands more quickly. 

Unfortunately USPS mail forwarding is very slow, much slower than they said it would be. If you ship your sample to our old address, it’ll still get to us… but it turns out this takes way too long. 

So please: ship your samples to our new address instead!

AquaBiomics LLC
620 Holly St
Junction City, OR 97448

Check your shipping envelope

Does it already have the new address? In that case you don’t need to do anything special, just drop it in the mail. 

Need a new shipping label?

Just send us an email (contact@aquabiomics.com). We can email you a new label with just a few clicks. This is the easiest way to make sure your sample gets to us on time. 

Already returned your sample?

Let us know if you recently shipped us your sample but haven’t gotten confirmation of arrival yet. Some samples may be stuck in mail forwarding – please let us know if thats you, and we can ship a replacement kit. 

Samples are returning to the new address faster than ever, so in the long run this will benefit everyone by reducing turnaround times. Thanks for your patience during this transition. 

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Introducing Aquacultured Live Reef Rubble

Aquacultured Live Reef Rubble

Here’s something we’ve had cooking in the background for over a year, and its finally ready to release: a brand new, fully aquacultured version of Live Reef Rubble. 

Old-school natural live rock was great – but its increasingly hard to find, and it always carried the risk of hitchhikers. Here’s the new solution for modern reef-keeping: a defined microbial community. All the diversity, all the nitrifying microbes, none of the pathogens, parasites, or hitchhikers. 

We started with clean, dry, coral rubble – 100% coral derived material, shipped dry from the exporters to us. We cleaned and sterilized it again just to be sure. 

Then we inoculated it with natural microbial communities from clean sources we had tested ourselves. We cultured it in low light and plenty of nutrients – for over a year. 

And this is the result. A really excellent microbial community similar to what you’d find in a mature reef tank. But absolutely ZERO pathogens, and ZERO parasites. And no surprise – this material has never been in a tank with fish. 

979

different kinds of microbes

4

Families of nitrifying microbes

0

pathogens or parasites

0

pests

 

Its not just diversity – this material has the right kinds of microbes. A community similar to what we find in mature, healthy reef tanks. 

FamilyNumber of types
Alteromonadaceae13
Flavobacteriaceae6
Oceanospirillaceae2
Pelagibacteraceae2
Rhodobacteraceae10

It took a long time to grow but we’re really happy with the final result. This is simply one of the best communities we’ve seen in any material we’ve tested. 

Start your reef tank with a known source of microbial diversity, avoiding the risks of natural live rock from untested sources. Check out our Aquacultured Live Reef Rubble today!

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About the price increase

Why did the price go up?

If you notice this price has gone up a little, you’re right.

At this point you’ve probably noticed the price of everything from eggs to gasoline has gone up over the past few years. In our case, the cost of shipping has increasedby more than 20%, while the cost of our base material for the Live Reef Rubble has more than doubled (>100% increase!)

Throughout that whole time, we havent raised our prices by a cent. It was always a volume business with a small profit margin, but lately we’ve watched that margin get whittled away to nothing. This price increase only brings us back to our original margins.

While we don’t like raising prices, we have to remain above water in order to continue providing our services and products to the reefkeeping community. 

Thanks for your understanding!

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What’s in a Microbiome Report?

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What's in a Microbiome Report?

The Microbiome Test provides a detailed picture of the microbial community in your tank, by identifying DNA from any prokaryotes in your sample. The report includes information on

  • Diversity and composition of the community in your sample
  • Beneficial microbes like the Nitrifying community
  • Harmful pathogens that contribute to fish and coral disease

To view a complete example report, click here.

Each section in the report includes a diagnosis of your sample, with a link to suggestions for correcting any deficiencies we find.
The report compares the composition of your community with the typical reef tank community.
If your sample contains any bacterial families at higher than usual levels, the report provides extensive details on the composition of these families in your sample, and across our database of reef tank samples.
The report links to our Reef Tank Microbes DB, providing detailed information on each of these families of microbes. The example shown here is from our page on the common Bacterial family Vibrionaceae.
In many cases, the report includes specific recommendations for adjusting the levels of excess or deficienct families.
The report provides detailed information on your Nitrifying Community. This is one of the most important factors in establishing a new tank, and a surprisingly large fraction of tanks struggle with deficient Nitrifying communities (especially the Nitrite Oxidizing Bacteria).
We screen your sample for dozens of different pathogens of fish and corals, and if any are detected, the report highlights these and provides links to information about each group.

The bottom line: our Microbiome Test provides an unprecedented level of detail on the microbial community in your tank, including both beneficial microbes that are crucial to the success of a reef tank, and harmful pathogens that can kill fish or corals. 

Seen enough? Click here to order your sampling kit today and find out whats growing in your tank!

© Aquabiomics LLC, 2023 | About us | Contact us | FAQ

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What’s in a TankDNA Report?

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What's in a TankDNA Report?

The TankDNA test identifies DNA from any eukaryotes in your sample. The main goal of this test is to screen for eukaryotic parasites that contribute to fish and coral diseases in the reef tank. To view a complete example report, click here.

If your sample contains DNA from known parasites, these are highlighted in your report.
The report links to detailed resources for the most common kinds of parasites. This example shows a details from the page on the fish disease Uronema. To learn more, click here.
The TankDNA test also captures DNA from micro algae like diatoms and dinoflagellates that can become a nuisance in the aquarium. If your sample contains high levels of either group, this is flagged in the report.

Along with parasites and algae, the TankDNA test identifies DNA from the whole reef tank community. The test results typically include DNA from:

  • Livestock like fish, corals, and other invertebrates
  • Cryptic animals like sponges, worms, and copepods
  • Micro eukaryotes like ciliates, dinoflagellates, and amoeba
  • Coralline algae
  • Macro algae 
This figure shows the diversity of different DNA sources in your sample.
You can dig deeper into each of these groups in the Complete Table at the end of the report, where we list the specific types found in each group.

The bottom line: our TankDNA Test provides an unprecedented level of detail on the community in your tank, including cryptic and microscopic communities that are not visible to the naked eye.

Seen enough? Click here to order your sampling kit today and find out whats growing in your tank!

© Aquabiomics LLC, 2023 | About us | Contact us | FAQ

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Holiday Shipping Schedule

We do not ship any live products during the week before or after Christmas (Dec 18 – Jan 3), because shipping during the holidays is often delayed, and it’s cold out there. 

Any live products ordered during this period will ship out the first week in January. 

Sampling kits for our Microbiome, tankDNA, and Oceamo water chemistry tests will ship as usual throughout this period, since shipping delays aren’t a problem for these kits. 

Merry Christmas and Happy New Year to all!