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Certificate of Analysis LRS G12.3

Certificate of Analysis: Live Reef Sand, Batch LRS G12.3

lrs.g12.3_Certificate_of_Analysis

    Certificate of Analysis



About this report

This report summarizes the results from DNA analysis of the community growing in a batch of Live Reef Sand. Universal genetic markers were amplified from microbial (prokaryotic) and other (eukaryotic) DNA in the sample, and thousands of individual DNA molecules from this mixture were sequenced. Each sequence was then compared with public DNA databases to identify its origin. This report summarizes the kinds of organisms detected in the sample, with a focus on beneficial microbes, pathogens, and parasites.

Information about this sample

Sample ID lrs.g12.3
Batch Name g04-17-2026
Sample Date 07/12/2026 10:00 AM

Microbial Diversity

This sample contained DNA from 703 different types of microbes.


This pie chart shows the diversity of each microbial family found in the sample. The size of each slice is proportional to the number of different types (labels on each slice). For clarity, only families with 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Nitrifying Community

Ammonia-Oxidizing Microbes

Cenarchaeaceae
Type Percent of Community Genus Species
2996 0.46 Nitrosopumilus Unknown
9677 0.29 Nitrosopumilus Unknown
74696 0.21 Cenarchaeum symbiosum
3535 0.04 Cenarchaeum symbiosum

Nitrite-Oxidizing Bacteria

Nitrospiraceae
Type Percent of Community Genus Species
410564 0.04 Unknown Unknown
The nitrifying community in this sample included 5 different types of microbes.

Bacterial Pathogens

None found.

Complete list of pathogens we screened for:

Eubacterium tarantellae, Lactococcus garvieae, Enterococcus seriolicida, Streptococcus parauberis, Streptococcus iniae, Mycobacterium chelonei, Mycobacterium fortuitum, Mycobacterium marinum, Mycobacterium neoaurum, Nocardia asteroides, Nocardia salmonicida, Nocardia seriolae, Renibacterium salmoninarum, Aeromonas jandaei, Aeromonas salmonicida, Serratia liquefaciens, Chryseobacterium balustinum, Chryseobacterium scophthalmum, Tenacibaculum maritimus, Tenacibaculum ovolyticus, Pasteurella skyensis, Pseudomonas anguilliseptica, Moritella marina, Moritella viscosa, Photobacterium damselae, Shewanella putrefaciens, Vibrio alginolyticus, Vibrio cholerae, Vibrio fischeri, Vibrio furnissii, Vibrio harveyi, Vibrio carchariae, Vibrio trachuri, Vibrio ichthyoenteri, Vibrio logei, Vibrio ordalii, Vibrio pelagius, Vibrio salmonicida, Vibrio splendidus, Halomonas cupida, Piscirickettsia salmonis, Vibrio shiloi, Vibrio coralliilyticus, Vibrio harveyi, Aurantimonas coralicida, Vibrio rotiferianus, Vibrio alginolyticus, Vibrio proteolyticus, Vibrio charcharvina, Serratia marscesens, Aquarickettsia rohweri

Eukaryotic Biodiversity

This sample contained DNA from 1448 different Eukaryotic sources.


This pie chart shows the diversity of each Eukaryotic Phylum detected in the sample. The size of each slice is proportional to the number of different types from each phylum. For clarity, only families with 3 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Parasites

None of the DNA sequences from this sample matched known parasites.
Group Description Percent of eDNA
Amyloodinium Dinoflagellate parasites responsible for the fish disease Marine Velvet 0
Cryptocaryon Ciliate parasites responsible for the fish disease Ich 0
Brooklynella Ciliate parasites responsible for the fish disease Brook 0
Uronema Ciliate parasites responsible for a fish disease called by the same name 0
Phestilla Montipora-eating Nudibranchs 0
Amakusaplana Acropora-eating Flatworms 0
Ancyrocephalidae Flatworms often called Flukes that parasitize fish 0
Gyrodactylidae Flatworms often called Flukes that parasitize fish 0
Capsalidae Flatworms often called Flukes that parasitize fish 0
Turbonilla Snails in the family Pyramidellidae that parasitize giant clams 0
Trichodina A ciliated protozoan parasite of fish 0

Other Animal Pests

None of the DNA sequences from this sample matched known animal pests.
Group Description Percent of eDNA
Aiptasia The glass anemone, a ubiquitous pest 0
Thylacodes Vermetid snails 0
Asterina A group of sea stars that includes coral predators 0

Complete list of Eukaryotes identified

This list includes all Eukaryotes (Animals, Protists, and anything else besides Bacteria or Archaea) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Rubifabriciola markginsbergi (Annelida), Spirorbis spirorbis (Annelida), Pileolaria sp. (Annelida), Vermiliopsis infundibulum (Annelida), Chitinopoma serrula (Annelida), Paranerilla limicola (Annelida), Foraminifera environmental (Apicomplexa), Selenidium fallax (Apicomplexa), Selenidium sp. (Apicomplexa), uncultured eukaryote 608355 (Apicomplexa), Bryocamptus stillae (Arthropoda), Zaus caeruleus (Arthropoda), Agaue sp. (Arthropoda), Rhombognathus areolatus (Arthropoda), Lourinia armata (Arthropoda), uncultured eukaryote 609176 (Arthropoda), Paramenophia sp. (Arthropoda), uncultured eukaryote 609392 (Arthropoda), Copidognathus sp. (Arthropoda), Mellinus arvensis (Arthropoda), Nannopus parvipilis (Arthropoda), Bryocamptus pygmaeus (Arthropoda), Humulus lupulus (Ascomycota), Curvularia kusanoi (Ascomycota), Ophiosphaerella herpotricha (Ascomycota), Cryptococcus sp. (Basidiomycota), Malassezia globosa (Basidiomycota), Stereum hirsutum (Basidiomycota), metagenome (Centrohelida), uncultured eukaryote 599017 (Cercozoa), uncultured eukaryote 607851 (Cercozoa), uncultured eukaryote 608233 (Cercozoa), marine metagenome (Cercozoa), Haplosporidian parasite (Cercozoa), Gymnophrys sp. (Cercozoa), uncultured Oxytrichidae 171600 (Cercozoa), Protaspis grandis (Cercozoa), Paradinium poucheti (Cercozoa), uncultured eukaryote 609177 (Cercozoa), Massisteria marina (Cercozoa), metagenome (Cercozoa), Thaumatomastigidae environmental (Cercozoa), uncultured marine 609925 (Cercozoa), uncultured eukaryote 610171 (Cercozoa), uncultured eukaryote 610620 (Cercozoa), uncultured eukaryote 611284 (Cercozoa), Phaseoleae environmental (Cercozoa), uncultured marine 15485 (Cercozoa), uncultured eukaryote 609158 (Cercozoa), uncultured Thaumatomonadida 610170 (Cercozoa), uncultured eukaryote 610503 (Cercozoa), uncultured eukaryote 611036 (Cercozoa), uncultured eukaryote 611295 (Cercozoa), uncultured eukaryote 611330 (Cercozoa), uncultured eukaryote 612302 (Cercozoa), uncultured eukaryote 613143 (Cercozoa), uncultured eukaryote 613152 (Cercozoa), uncultured marine 613159 (Cercozoa), Vampyrellida sp. (Cercozoa), uncultured eukaryote 613247 (Cercozoa), uncultured eukaryote 613301 (Cercozoa), uncultured eukaryote 613324 (Cercozoa), Amphileptus litonotiformis (Ciliophora), Strombidinopsis batos (Ciliophora), Cinetochilum ovale (Ciliophora), Glauconema trihymene (Ciliophora), Miamiensis avidus (Ciliophora), Euplotes elegans (Ciliophora), uncultured ciliate 21826 (Ciliophora), Euplotes orientalis (Ciliophora), Aspidisca aculeata (Ciliophora), Vaginicola sp. (Ciliophora), uncultured ciliate 608104 (Ciliophora), Holosticha heterofoissneri (Ciliophora), Philaster sinensis (Ciliophora), Holosticha cf. (Ciliophora), Arcuseries petzi (Ciliophora), Apobryophyllum schmidingeri (Ciliophora), Strombidium sulcatum (Ciliophora), Cyclidium marinum (Ciliophora), uncultured Tintinnida 599011 (Ciliophora), Aristerostoma sp. (Ciliophora), uncultured eukaryote 1354 (Ciliophora), Protocruzia adherens (Ciliophora), uncultured ciliate 426028 (Ciliophora), Favella panamensis (Ciliophora), microbial mat (Ciliophora), Metanophrys sinensis (Ciliophora), uncultured eukaryote 612988 (Ciliophora), Vorticella sp. (Ciliophora), uncultured eukaryote 40318 (Ciliophora), Anophryoides haemophila (Ciliophora), uncultured eukaryote 518897 (Ciliophora), uncultured eukaryote 608190 (Ciliophora), Amphileptus spiculatus (Ciliophora), Strombidinopsis sinicum (Ciliophora), uncultured ciliate 612236 (Ciliophora), Oxytricha saltans (Ciliophora), Loxophyllum utriculariae (Ciliophora), Leptoria phrygia (Cnidaria), Phyllangia mouchezii (Cnidaria), Cocconeis cf. (Diatomea), Psammodictyon constrictum (Diatomea), Amphora coffeiformis (Diatomea), Biddulphia tridens (Diatomea), uncultured eukaryote 152458 (Diatomea), uncultured marine 593085 (Diatomea), uncultured marine 608318 (Diatomea), Haslea ostrearia (Diatomea), uncultured marine 607781 (Diatomea), Craticula pseudocitrus (Diatomea), Tursiocola cf. (Diatomea), Licmosphenia peragallioides (Diatomea), uncultured eukaryote 607809 (Diatomea), uncultured marine 608813 (Diatomea), Thalassiosira hendeyi (Diatomea), Cocconeis stauroneiformis (Diatomea), Chaetoceros sp. (Diatomea), uncultured eukaryote 609711 (Diatomea), uncultured eukaryote 6222 (Diatomea), uncultured eukaryote 608481 (Diatomea), Navicula reinhardtii (Diatomea), uncultured marine 609398 (Diatomea), Nitzschia longissima (Diatomea), Stauroneis kriegeri (Diatomea), Convoluta convoluta (Diatomea), Pseudogomphonema sp. (Diatomea), Navicula arenaria (Diatomea), uncultured marine 273045 (Diatomea), uncultured marine 404685 (Diatomea), uncultured eukaryote 608275 (Diatomea), uncultured marine 609183 (Diatomea), uncultured eukaryote 609508 (Diatomea), uncultured marine 609571 (Diatomea), uncultured marine 609956 (Diatomea), uncultured eukaryote 56 (Diatomea), Asterionella glacialis (Diatomea), uncultured eukaryote 52878 (Diatomea), uncultured marine 61198 (Diatomea), uncultured stramenopile 206434 (Diatomea), uncultured eukaryote 403207 (Diatomea), Pseudo-nitzschia pungens (Diatomea), Fistulifera saprophila (Diatomea), uncultured marine 595668 (Diatomea), uncultured eukaryote 607901 (Diatomea), uncultured eukaryote 607981 (Diatomea), uncultured marine 608034 (Diatomea), Haslea spicula (Diatomea), Nitzschia sigma (Diatomea), uncultured marine 609427 (Diatomea), uncultured marine 609653 (Diatomea), Tryblionella apiculata (Diatomea), Undatella sp. (Diatomea), Tursiocola sp. (Diatomea), uncultured marine 611253 (Diatomea), uncultured eukaryote 612947 (Diatomea), uncultured marine 612977 (Diatomea), uncultured eukaryote 613047 (Diatomea), uncultured eukaryote 613051 (Diatomea), uncultured marine 613128 (Diatomea), uncultured eukaryote 613358 (Diatomea), Bacillaria paxillifer (Diatomea), uncultured marine 30341 (Diatomea), uncultured eukaryote 141765 (Diatomea), uncultured eukaryote 152348 (Diatomea), Navicula salinicola (Diatomea), Nitzschia communis (Diatomea), uncultured eukaryote 607841 (Diatomea), uncultured eukaryote 607920 (Diatomea), uncultured eukaryote 607950 (Diatomea), uncultured eukaryote 608140 (Diatomea), uncultured marine 608239 (Diatomea), uncultured eukaryote 608434 (Diatomea), uncultured marine 608818 (Diatomea), uncultured marine 608859 (Diatomea), uncultured marine 609035 (Diatomea), uncultured eukaryote 609277 (Diatomea), Bacillariophyta sp. (Diatomea), Nitzschia amphibia (Diatomea), uncultured marine 609658 (Diatomea), Rhaphoneis sp. (Diatomea), Craticula molestiformis (Diatomea), uncultured marine 609900 (Diatomea), uncultured eukaryote 609936 (Diatomea), uncultured eukaryote 610146 (Diatomea), uncultured marine 610476 (Diatomea), Nitzschia sp. (Diatomea), uncultured marine 610634 (Diatomea), Navicula veneta (Diatomea), uncultured marine 611026 (Diatomea), uncultured eukaryote 611063 (Diatomea), uncultured eukaryote 611175 (Diatomea), uncultured eukaryote 611321 (Diatomea), uncultured eukaryote 611325 (Diatomea), uncultured marine 611327 (Diatomea), Fragilaria capucina (Diatomea), uncultured marine 612182 (Diatomea), uncultured marine 612184 (Diatomea), uncultured eukaryote 612195 (Diatomea), Fragilaria sp. (Diatomea), uncultured marine 612930 (Diatomea), uncultured marine 612934 (Diatomea), Hyalosira sp. (Diatomea), Nitzschia cf. (Diatomea), Cylindrotheca fusiformis (Diatomea), uncultured stramenopile 612953 (Diatomea), uncultured marine 612954 (Diatomea), Actinella sp. (Diatomea), uncultured marine 612976 (Diatomea), uncultured eukaryote 613020 (Diatomea), uncultured marine 613022 (Diatomea), uncultured marine 613158 (Diatomea), uncultured marine 613160 (Diatomea), Peridinium balticum (Diatomea), Amphora sp. (Diatomea), uncultured marine 613294 (Diatomea), Prorocentrum micans (Dinoflagellata), Ostreopsis cf. (Dinoflagellata), Coolia canariensis (Dinoflagellata), Bysmatrum arenicola (Dinoflagellata), Symbiodinium sp. (Dinoflagellata), uncultured eukaryote 553909 (Dinoflagellata), uncultured eukaryote 61173 (Dinoflagellata), Amphidinium carterae (Dinoflagellata), uncultured eukaryote 608632 (Dinoflagellata), Pfiesteria-like sp. (Dinoflagellata), uncultured dinoflagellate 522016 (Dinoflagellata), Prorocentrum arenarium (Dinoflagellata), uncultured eukaryote 609109 (Dinoflagellata), uncultured eukaryote 609111 (Dinoflagellata), uncultured eukaryote 609512 (Dinoflagellata), Gymnodinium smaydae (Dinoflagellata), Bysmatrum subsalsum (Dinoflagellata), uncultured eukaryote 422 (Dinoflagellata), Amphidinium sp. (Dinoflagellata), uncultured eukaryote 415581 (Dinoflagellata), Pfiesteria sp. (Dinoflagellata), Stoeckeria sp. (Dinoflagellata), uncultured eukaryote 607842 (Dinoflagellata), uncultured eukaryote 607859 (Dinoflagellata), Dinophyta sp. (Dinoflagellata), uncultured eukaryote 608129 (Dinoflagellata), uncultured eukaryote 608191 (Dinoflagellata), uncultured eukaryote 608372 (Dinoflagellata), uncultured eukaryote 609663 (Dinoflagellata), uncultured eukaryote 610184 (Dinoflagellata), uncultured eukaryote 610518 (Dinoflagellata), uncultured eukaryote 610520 (Dinoflagellata), uncultured eukaryote 610613 (Dinoflagellata), Gymnodinium sp. (Dinoflagellata), uncultured eukaryote 611076 (Dinoflagellata), Symbiodinium microadriaticum (Dinoflagellata), uncultured marine 611080 (Dinoflagellata), Moestrupia sp. (Dinoflagellata), uncultured eukaryote 612109 (Dinoflagellata), uncultured eukaryote 612244 (Dinoflagellata), uncultured eukaryote 612245 (Dinoflagellata), uncultured eukaryote 612246 (Dinoflagellata), Coolia sp. (Dinoflagellata), uncultured eukaryote 612436 (Dinoflagellata), uncultured eukaryote 612437 (Dinoflagellata), uncultured eukaryote 612439 (Dinoflagellata), uncultured dinoflagellate 612446 (Dinoflagellata), uncultured eukaryote 612450 (Dinoflagellata), Polarella glacialis (Dinoflagellata), Leiocephalium pseudosanguineum (Dinoflagellata), uncultured eukaryote 613228 (Dinoflagellata), uncultured eukaryote 613325 (Dinoflagellata), uncultured eukaryote 613336 (Dinoflagellata), Neobodo designis (Euglenozoa), Bodonidae sp. (Euglenozoa), Diplonema sp. (Euglenozoa), Petalomonas cantuscygni (Euglenozoa), Notosolenus urceolatus (Euglenozoa), Rhynchopus sp. (Euglenozoa), uncultured eukaryote 612494 (Euglenozoa), Paraphysomonas imperforata (Eukaryota), Symbiochloris sp. (Eukaryota), Monosiga brevicollis (Eukaryota), Paramoeba aestuarina (Eukaryota), Phaeophila dendroides (Eukaryota), Ulvella repens (Eukaryota), uncultured eukaryote 1494 (Eukaryota), eukaryote clone (Eukaryota), Ulvophyceae sp. (Eukaryota), metagenome (Eukaryota), uncultured Nannochloris 609033 (Eukaryota), uncultured eukaryote 608639 (Eukaryota), Costaria costata (Eukaryota), Salpingoeca kvevrii (Eukaryota), Ciliophrys infusionum (Eukaryota), Salpingoeca tuba (Eukaryota), Lunachloris lukesovae (Eukaryota), Hazenia basiliensis (Eukaryota), Tetraselmis convolutae (Eukaryota), Platyamoeba contorta (Eukaryota), Ulvella viridis (Eukaryota), Cladophora socialis (Eukaryota), Lingulamoeba sp. (Eukaryota), eukaryotic picoplankton (Eukaryota), Paramoeba atlantica (Eukaryota), uncultured Nannochloris 609110 (Eukaryota), Paramoeba pemaquidensis (Eukaryota), Rhinomonas pauca (Eukaryota), Scherffelia dubia (Eukaryota), uncultured stramenopile 612841 (Eukaryota), uncultured eukaryote 612852 (Eukaryota), uncultured eukaryote 612864 (Eukaryota), uncultured stramenopile 612889 (Eukaryota), Prasinoderma coloniale (Eukaryota), Chaetomorpha sp. (Eukaryota), Scytosiphon lomentaria (Eukaryota), Chrysophyceae sp. (Eukaryota), Ulva sp. (Eukaryota), uncultured prasinophyte 608272 (Eukaryota), Pirum gemmata (Eukaryota), Ruthnielsenia tenuis (Eukaryota), uncultured Dunaliellaceae 610175 (Eukaryota), Ectocarpus siliculosus (Eukaryota), Tetraselmis marina (Eukaryota), Picochlorum eukaryotum (Eukaryota), uncultured Nannochloris 612426 (Eukaryota), Halothrix ambigua (Eukaryota), uncultured Chrysophyceae 612844 (Eukaryota), uncultured eukaryote 612848 (Eukaryota), uncultured Paraphysomonas 612855 (Eukaryota), uncultured eukaryote 612867 (Eukaryota), uncultured eukaryote 612895 (Eukaryota), uncultured eukaryote 612911 (Eukaryota), uncultured Dunaliellaceae 612928 (Eukaryota), Choanoeca perplexa (Eukaryota), Rhodomonas sp. (Eukaryota), Chlamydomonas sp. (Eukaryota), uncultured Chlorophyta 613266 (Eukaryota), Ramicrusta textilis (Florideophycidae), Polyopes tenuis (Florideophycidae), Lithophyllum pustulatum (Florideophycidae), uncultured Corallinales 327382 (Florideophycidae), Rhodopeltis borealis (Florideophycidae), Dumontia simplex (Florideophycidae), uncultured Corallinales 609286 (Florideophycidae), Pirsonia verrucosa (Incertae_Sedis), Pirsonia guinardiae (Incertae_Sedis), Thraustochytrium multirudimentale (Labyrinthulomycetes), Schizochytrium minutum (Labyrinthulomycetes), uncultured marine 2482 (Labyrinthulomycetes), uncultured marine 1339 (Labyrinthulomycetes), unidentified (Labyrinthulomycetes), uncultured eukaryote 1294 (Labyrinthulomycetes), uncultured stramenopile 21358 (Labyrinthulomycetes), Oblongichytrium sp. (Labyrinthulomycetes), Thraustochytriidae sp. (Labyrinthulomycetes), uncultured marine 608343 (Labyrinthulomycetes), uncultured eukaryote 32733 (Labyrinthulomycetes), uncultured marine 152829 (Labyrinthulomycetes), uncultured marine 60756 (Labyrinthulomycetes), uncultured marine 609026 (Labyrinthulomycetes), Stellarchytrium dubum (Labyrinthulomycetes), uncultured marine 609390 (Labyrinthulomycetes), uncultured eukaryote 5115 (Labyrinthulomycetes), Aplanochytrium stocchinoi (Labyrinthulomycetes), uncultured eukaryote 608475 (Labyrinthulomycetes), uncultured marine 609676 (Labyrinthulomycetes), Thraustochytrium sp. (Labyrinthulomycetes), uncultured marine 611279 (Labyrinthulomycetes), Labyrinthuloides minuta (Labyrinthulomycetes), uncultured eukaryote 29232 (Labyrinthulomycetes), Botryochytrium sp. (Labyrinthulomycetes), uncultured marine 613069 (Labyrinthulomycetes), uncultured stramenopile 613202 (Labyrinthulomycetes), uncultured eukaryote 72 (Labyrinthulomycetes), uncultured eukaryote 2090 (Labyrinthulomycetes), uncultured marine 6419 (Labyrinthulomycetes), uncultured marine 62800 (Labyrinthulomycetes), uncultured stramenopile 173963 (Labyrinthulomycetes), uncultured eukaryote 609370 (Labyrinthulomycetes), uncultured marine 611031 (Labyrinthulomycetes), uncultured eukaryote 611278 (Labyrinthulomycetes), uncultured marine 612209 (Labyrinthulomycetes), uncultured marine 612286 (Labyrinthulomycetes), uncultured eukaryote 612288 (Labyrinthulomycetes), uncultured marine 612353 (Labyrinthulomycetes), uncultured marine 612882 (Labyrinthulomycetes), uncultured marine 613058 (Labyrinthulomycetes), uncultured eukaryote 613059 (Labyrinthulomycetes), Aplanochytrium sp. (Labyrinthulomycetes), uncultured marine 613066 (Labyrinthulomycetes), uncultured marine 613067 (Labyrinthulomycetes), uncultured marine 613068 (Labyrinthulomycetes), uncultured eukaryote 613078 (Labyrinthulomycetes), uncultured stramenopile 613201 (Labyrinthulomycetes), uncultured marine 613218 (Labyrinthulomycetes), Hanleyella oldroydi (Mollusca), Turbo cornutus (Mollusca), Acanthopharynx micans (Nematozoa), Chromadorita leuckarti (Nematozoa), Deontolaimus sp. (Nematozoa), Desmoscolex sp. (Nematozoa), Festuca arundinacea (Phragmoplastophyta), Cucumis sativus (Phragmoplastophyta), Hordeum vulgare (Phragmoplastophyta), Phaseolus vulgaris (Phragmoplastophyta), Leucetta sp. (Porifera), Haliclona amboinensis (Porifera), Aphroceras sp. (Porifera), Clathrina luteoculcitella (Porifera), Clathrina aff. (Porifera), Leucandra nicolae (Porifera), Haliclona cinerea (Porifera), Leucascandra caveolata (Porifera), Grantiopsis heroni (Porifera), uncultured marine 608142 (Protalveolata), uncultured eukaryote 32469 (Protalveolata), uncultured marine 609170 (Protalveolata), Voromonas pontica (Protalveolata), uncultured marine 610185 (Protalveolata), uncultured marine 612256 (Protalveolata), uncultured Syndiniales 612372 (Protalveolata), Chromerida sp. (uncultured), uncultured eukaryote 609906 (uncultured), uncultured eukaryote 611078 (uncultured), uncultured eukaryote 607798 (uncultured), uncultured eukaryote 613341 (uncultured)

Complete List of Microbes Identified

This list includes all microbes (Bacteria & Archae) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Photobacterium angustum, Unclassified Bacteria 195182, Unclassified Bacteria 27069, Vibrio sp., Unclassified Coxiellaceae 429070, Unclassified Piscirickettsiaceae 871, Unclassified Bacteria 429074, Unclassified Hyphomicrobiaceae 429076, Unclassified Colwelliaceae 429073, Unclassified Bacteria 1800, Unclassified Bacteria 26049, Unclassified Bacteria 68430, Unclassified Rhodobacteraceae 951, Alteromonas sp., Pseudoalteromonas piscicida, Unclassified Piscirickettsiaceae 334, Microbulbifer sp., Unclassified Bacteria 429072, Unclassified Rhodobacteraceae 451, Unclassified Bacteria 949, Unclassified Coxiellaceae 1075, Unclassified Rhodobacteraceae 41, Olleya sp., Unclassified Bacteria 791, Methylophaga sp., Unclassified Legionellaceae 409922, Unclassified Bacteria 1286, Unclassified Vibrionaceae 421420, Nitrosopumilus sp., Unclassified Bacteria 429103, Unclassified Colwelliaceae 429104, Unclassified Oleiphilaceae 2870, Unclassified Bacteria 230705, Unclassified Colwelliaceae 429107, Unclassified Flavobacteriaceae 570, Unclassified Bacteria 81476, Vibrio rumoiensis, Unclassified Bacteria 122847, Thalassomonas sp., Unclassified Bacteria 429115, Unclassified Flavobacteriaceae 429116, Unclassified Bacteria 9721, Unclassified Criblamydiaceae 188976, Unclassified Kordiimonadaceae 225271, Unclassified Oceanospirillaceae 918, Mycobacterium sp., Unclassified Oceanospirillaceae 1096, Unclassified Bacteria 265367, Unclassified Bacteria 429131, Unclassified Bacteria 429134, Unclassified Rhodobacteraceae 429135, Unclassified Bacteria 14517, Unclassified Hyphomicrobiaceae 253025, Unclassified Oceanospirillaceae 2545, Photobacterium sp., Unclassified Hyphomicrobiaceae 286, Glaciecola sp., Unclassified Bacteria 253202, Unclassified Bacteria 429151, Bdellovibrio sp., Unclassified Oleiphilaceae 2222, Unclassified Bacteria 2094, Unclassified Bacteria 11399, Unclassified Pirellulaceae 429166, Unclassified Bacteria 652, Unclassified Rhodobacteraceae 11297, Anaerospora hongkongensis, Unclassified Alteromonadaceae 429173, Unclassified Hyphomonadaceae 817, Unclassified Bacteria 195177, Unclassified Cryomorphaceae 744, Tepidibacter sp., Cenarchaeum symbiosum, Halomonas sp., Unclassified Bacteria 107030, Unclassified Rhodobacteraceae 10836, Unclassified Bacteria 68755, Clostridium sp., Unclassified Pirellulaceae 429198, Crocinitomix sp., Unclassified Oceanospirillaceae 13896, Unclassified Bacteria 99527, Unclassified Bacteria 227207, Unclassified Colwelliaceae 429208, Ferrimonas sp., Unclassified Bacteria 421714, Unclassified Bacteria 429214, Unclassified Rhodobacteraceae 1768, Curtobacterium sp., Unclassified Oleiphilaceae 429220, Desulfococcus sp., Unclassified Pirellulaceae 409980, Unclassified Alteromonadaceae 163006, Unclassified Bacteria 28611, Phyllobacterium sp., Unclassified Bacteria 16050, Unclassified Bacteria 429255, Unclassified Flavobacteriaceae 69773, Unclassified Pirellulaceae 109572, Unclassified Bacteria 273503, Unclassified Oceanospirillaceae 429266, Tenacibaculum sp., Unclassified Saprospiraceae 64146, Unclassified Bacteria 105166, Unclassified Bacteria 429274, Unclassified Bacteriovoracaceae 16, Unclassified Bacteria 410077, Unclassified Flavobacteriaceae 35240, Unclassified koll13 61095, Unclassified Bacteria 224962, Unclassified Bacteria 256479, Unclassified Flammeovirgaceae 429307, Nocardia sp., Unclassified Bacteria 220304, Unclassified Oceanospirillaceae 429316, Unclassified Desulfovibrionaceae 40026, BD2-13 sp., Unclassified Bacteria 904, Amphritea sp., Unclassified Flavobacteriaceae 429341, Planctomyces sp., Unclassified Hyphomicrobiaceae 410155, Unclassified Colwelliaceae 429359, Unclassified Bacteria 429360, Unclassified Colwelliaceae 429361, Unclassified Bacteria 7289, Unclassified Saccharospirillaceae 267271, Unclassified Hyphomicrobiaceae 410185, Unclassified Oceanospirillaceae 429323, Inquilinus sp., Unclassified Saprospiraceae 69158, A17 sp., Unclassified Bacteria 126931, Unclassified Oceanospirillaceae 265739, Unclassified Rhodobacteraceae 429401, Unclassified Vibrionaceae 429403, Unclassified Cohaesibacteraceae 410256, Unclassified Bacteria 410257, Unclassified Piscirickettsiaceae 410258, Unclassified Desulfobulbaceae 429430, Unclassified Colwelliaceae 717, Unclassified Kordiimonadaceae 429444, Unclassified koll13 93630, Unclassified Pirellulaceae 429475, Thalassospira sp., Unclassified Rhodobacteraceae 341627, Unclassified Flavobacteriaceae 410456, Unclassified Pirellulaceae 429513, Winogradskyella sp., Unclassified Bacteria 429516, Unclassified Bacteria 88113, Unclassified Micrococcaceae 154917, Unclassified Nitrospiraceae 410564, Unclassified Cryomorphaceae 429552, Unclassified Piscirickettsiaceae 178417, Unclassified Pirellulaceae 410718, Unclassified Cohaesibacteraceae 410719, Unclassified Rhodospirillaceae 410720, Unclassified Bacteria 429617, Unclassified Coxiellaceae 429618, Unclassified Bacteria 2629, Unclassified Oleiphilaceae 185087, Unclassified Bacteria 429672, Unclassified Bacteria 429673, Unclassified Bacteria 429674, Unclassified Flavobacteriaceae 429677, Unclassified Coxiellaceae 429680, Deinococcus sp., Unclassified Kiloniellaceae 240, Unclassified Bacteria 113409, Unclassified CV106 411200, Unclassified Bacteria 411202, Unclassified Piscirickettsiaceae 411203, Unclassified Bacteria 411204, Unclassified Pirellulaceae 429749, Unclassified Methylobacteriaceae 429751, Unclassified Flavobacteriaceae 429754, Unclassified Bacteria 429761, Marinobacter sp., Paenibacillus sp., Unclassified Bacteria 377467, Unclassified Cohaesibacteraceae 411646, Unclassified Bacteria 411647, Unclassified Pirellulaceae 429885, Unclassified Pirellulaceae 429886, Unclassified Bacteria 429887, Unclassified Bacteria 429888, Unclassified Bacteria 429889, Unclassified Hyphomicrobiaceae 429891, Unclassified Bacteria 429896, Unclassified Hyphomicrobiaceae 429897, Rhodovulum sp., Unclassified Coxiellaceae 429900, Unclassified Alteromonadaceae 429902, Unclassified Bacteria 429903, Unclassified Legionellaceae 429912, Unclassified Legionellaceae 429913, Unclassified Legionellaceae 429914, Unclassified Hyphomonadaceae 290, Unclassified Coxiellaceae 3520, Unclassified Flavobacteriaceae 10570, Unclassified Oleiphilaceae 139262, Unclassified Oceanospirillaceae 165587, Bacteriovorax sp., Unclassified Oceanospirillaceae 225062, Unclassified Kiloniellaceae 230561, Unclassified Oceanospirillaceae 271888, Unclassified Rhodobacteraceae 408545, Unclassified Archaea 412532, Unclassified Phycisphaeraceae 412533, Unclassified Bacteria 412534, Unclassified Cohaesibacteraceae 412546, Unclassified Bacteria 412553, Unclassified Bacteria 428419, Unclassified Rhodobacteraceae 429112, Unclassified Bacteria 429698, Unclassified Bacteria 430104, Unclassified Bacteria 430105, Unclassified Bacteria 430106, Unclassified Bacteria 430107, Unclassified Coxiellaceae 430108, Unclassified Hyphomicrobiaceae 430109, Unclassified Hyphomicrobiaceae 430112, Unclassified Coxiellaceae 430115, Unclassified Colwelliaceae 430116, Unclassified Flavobacteriaceae 430118, Unclassified Hyphomicrobiaceae 430119, Unclassified Rhodobacteraceae 430120, Unclassified Hyphomicrobiaceae 430121, Unclassified Rhodobacteraceae 430123, Unclassified Oceanospirillaceae 430125, Unclassified Colwelliaceae 430126, Fluviicola sp., Unclassified Oceanospirillaceae 430132, Unclassified Bacteria 430133, Unclassified Desulfobulbaceae 430137, Unclassified Bacteria 430142, Unclassified Rhodobacteraceae 246, Unclassified Flavobacteriaceae 1191, Unclassified Piscirickettsiaceae 9883, Unclassified Sphingomonadaceae 52522, Unclassified Bacteria 143385, Unclassified Oceanospirillaceae 150413, Unclassified Colwelliaceae 215930, Unclassified Bacteria 233035, Unclassified Piscirickettsiaceae 249033, Unclassified Oceanospirillaceae 266445, Unclassified Rhodobacteraceae 304042, Unclassified Hyphomonadaceae 305734, Unclassified Bacteria 326851, Unclassified Rhodobacteraceae 341169, Unclassified Oceanospirillaceae 400092, Unclassified Bacteria 414287, Unclassified Bacteria 414289, Unclassified Piscirickettsiaceae 414297, Unclassified Piscirickettsiaceae 414298, Unclassified Bacteria 414299, Unclassified Bacteria 414303, Unclassified Cohaesibacteraceae 414304, Unclassified Rhodospirillaceae 414305, Unclassified Piscirickettsiaceae 414308, Unclassified Piscirickettsiaceae 414309, Unclassified Piscirickettsiaceae 414313, Unclassified koll13 414316, Unclassified Oceanospirillaceae 417538, Unclassified Bacteria 422472, Unclassified Criblamydiaceae 428766, Unclassified Pirellulaceae 430854, Unclassified Bacteria 430855, Unclassified Bacteria 430856, Unclassified Coxiellaceae 430857, Unclassified Coxiellaceae 430858, Unclassified Coxiellaceae 430859, Unclassified Rhodobacteraceae 430863, Unclassified Piscirickettsiaceae 430865, Unclassified Hyphomicrobiaceae 430869, Unclassified Rhodobacteraceae 430870, Unclassified Rhodobacteraceae 430872, Unclassified Phyllobacteriaceae 430874, Unclassified Bacteria 430875, Unclassified Phyllobacteriaceae 430878, Unclassified Hyphomicrobiaceae 430879, Unclassified Hyphomicrobiaceae 430880, Unclassified Phyllobacteriaceae 430881, Unclassified Bacteria 430882, Unclassified Bacteria 430883, Unclassified Bacteria 430884, Unclassified Alteromonadaceae 430891, Unclassified Oceanospirillaceae 430892, Unclassified Colwelliaceae 430893, Unclassified Colwelliaceae 430894, Unclassified Hyphomicrobiaceae 430897, Unclassified Bacteria 430898, Unclassified Hyphomicrobiaceae 430901, Unclassified Bacteria 430903, Unclassified Bacteria 430904, Unclassified Bacteria 430907, Unclassified Hyphomicrobiaceae 430908, Unclassified Hyphomicrobiaceae 430909, Unclassified Rhodobacteraceae 430913, Unclassified Rhodobacteraceae 430914, Unclassified Bacteria 430919, Unclassified Bacteria 430920, Unclassified Colwelliaceae 430921, Unclassified Bacteria 430922, Unclassified Piscirickettsiaceae 430923, Unclassified Coxiellaceae 430931, Unclassified Coxiellaceae 430932, Unclassified Coxiellaceae 430933, Unclassified Coxiellaceae 430934, Unclassified Piscirickettsiaceae 430938, Unclassified Piscirickettsiaceae 430939, Unclassified Bacteria 430940, Unclassified Oleiphilaceae 430942, Unclassified Saccharospirillaceae 430944, Unclassified Oceanospirillaceae 430947, Unclassified Oceanospirillaceae 430948, Oleibacter sp., Unclassified Oceanospirillaceae 430950, Unclassified Oleiphilaceae 430951, Unclassified Colwelliaceae 430953, Unclassified Colwelliaceae 430954, Unclassified Legionellaceae 430955, Unclassified Legionellaceae 430956, Unclassified Rhodobacteraceae 430959, Unclassified Bacteria 430963, Unclassified Oceanospirillaceae 430967, Unclassified Oceanospirillaceae 430969, Unclassified Bacteria 430973, Unclassified Flammeovirgaceae 430974, Unclassified Desulfobulbaceae 430975, Unclassified Desulfobulbaceae 430976, Unclassified Desulfobulbaceae 430977, Unclassified Rhodobacteraceae 430980, Unclassified Colwelliaceae 430988, Unclassified Colwelliaceae 430989, Unclassified Vibrionaceae 430997, Unclassified Colwelliaceae 431002, Unclassified Colwelliaceae 431003, Unclassified Colwelliaceae 431005, Unclassified Rhodobacteraceae 431006, Unclassified Legionellaceae 431010, Unclassified Rhodobacteraceae 431025


DNA analysis conducted by AquaBiomics LLC.

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Certificate of Analysis LRR G12.3

Certificate of Analysis: Live Reef Rubble, Batch LRR G12.3

lrr.g12.3_Certificate_of_Analysis

    Certificate of Analysis



About this report

This report summarizes the results from DNA analysis of the community growing in and on a batch of Live Reef Rubble. Universal genetic markers were amplified from microbial (prokaryotic) and other (eukaryotic) DNA in the sample, and thousands of individual DNA molecules from this mixture were sequenced. Each sequence was then compared with public DNA databases to identify its origin. This report summarizes the kinds of organisms detected in the sample, with a focus on beneficial microbes, pathogens, and parasites.

Information about this sample

Sample ID lrr.g12.3
Batch Name g04-17-2026
Sample Date 07/12/2026 10:20 AM

Microbial Diversity

This sample contained DNA from 759 different types of microbes.


This pie chart shows the diversity of each microbial family found in the sample. The size of each slice is proportional to the number of different types (labels on each slice). For clarity, only families containing 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Nitrifying Community

Ammonia-Oxidizing Microbes

Cenarchaeaceae
Type Percent of Community Genus Species
2996 0.76 Nitrosopumilus Unknown
108976 0.64 Nitrosopumilus Unknown
9677 0.30 Nitrosopumilus Unknown
760 0.13 Nitrosopumilus Unknown

Nitrite-Oxidizing Bacteria

Nitrospiraceae
Type Percent of Community Genus Species
10234 0.21 Unknown Unknown
410564 0.04 Unknown Unknown
The nitrifying community in this sample included 6 different types of microbes.

Bacterial Pathogens

None found.

Complete list of pathogens we screened for:

Eubacterium tarantellae, Lactococcus garvieae, Enterococcus seriolicida, Streptococcus parauberis, Streptococcus iniae, Mycobacterium chelonei, Mycobacterium fortuitum, Mycobacterium marinum, Mycobacterium neoaurum, Nocardia asteroides, Nocardia salmonicida, Nocardia seriolae, Renibacterium salmoninarum, Aeromonas jandaei, Aeromonas salmonicida, Serratia liquefaciens, Chryseobacterium balustinum, Chryseobacterium scophthalmum, Tenacibaculum maritimus, Tenacibaculum ovolyticus, Pasteurella skyensis, Pseudomonas anguilliseptica, Moritella marina, Moritella viscosa, Photobacterium damselae, Shewanella putrefaciens, Vibrio alginolyticus, Vibrio cholerae, Vibrio fischeri, Vibrio furnissii, Vibrio harveyi, Vibrio carchariae, Vibrio trachuri, Vibrio ichthyoenteri, Vibrio logei, Vibrio ordalii, Vibrio pelagius, Vibrio salmonicida, Vibrio splendidus, Halomonas cupida, Piscirickettsia salmonis, Vibrio shiloi, Vibrio coralliilyticus, Vibrio harveyi, Aurantimonas coralicida, Vibrio rotiferianus, Vibrio alginolyticus, Vibrio proteolyticus, Vibrio charcharvina, Serratia marcescens, Aquarickettsia rohweri

Eukaryotic Biodiversity

This sample contained DNA from 1594 different Eukaryotic sources.


This pie chart shows the diversity of each Eukaryotic Phylum detected in the sample. The size of each slice is proportional to the number of different types from each phylum. For clarity, only families containing 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Parasites

None of the DNA sequences from this sample matched known parasites.
Group Description Percent of eDNA
Amyloodinium Dinoflagellate parasites responsible for the fish disease Marine Velvet 0
Cryptocaryon Ciliate parasites responsible for the fish disease Ich 0
Brooklynella Ciliate parasites responsible for the fish disease Brook 0
Uronema Ciliate parasites responsible for a fish disease called by the same name 0
Phestilla Montipora-eating Nudibranchs 0
Amakusaplana Acropora-eating Flatworms 0
Ancyrocephalidae Flatworms often called Flukes that parasitize fish 0
Gyrodactylidae Flatworms often called Flukes that parasitize fish 0
Capsalidae Flatworms often called Flukes that parasitize fish 0
Turbonilla Snails in the family Pyramidellidae that parasitize giant clams 0
Trichodina A ciliated protozoan parasite of fish 0

Other Animal Pests

None of the DNA sequences from this sample matched known animal pests.
Group Description Percent of eDNA
Aiptasia The glass anemone, a ubiquitous pest 0
Thylacodes Vermetid snails 0
Asterina A group of sea stars that includes coral predators 0

Complete list of Eukaryotes identified

This list includes all Eukaryotes (Animals, Protists, and anything else besides Bacteria or Archaea) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

uncultured marine 62324 (Ancyromonadida), uncultured marine 612685 (Ancyromonadida), Aspidosiphon steenstrupii (Annelida), Syllis lutea (Annelida), Chitinopoma serrula (Annelida), Nephasoma pellucidum (Annelida), Nephasoma flagriferum (Annelida), Paranerilla limicola (Annelida), Sabellastarte sp. (Annelida), Apomatus voightae (Annelida), Selenidium sp. (Apicomplexa), Eimeria acervulina (Apicomplexa), Polyplicarium citrusae (Apicomplexa), Multimonas koreensis (Apusomonadidae), Acarothrix sp. (Arthropoda), Copidognathus sp. (Arthropoda), Diplocoelus brunneus (Arthropoda), Zaus caeruleus (Arthropoda), Cycloneda sanguinea (Arthropoda), Typhlamphiascus typhlops (Arthropoda), Nannopus parvipilis (Arthropoda), Glycera cf. (Arthropoda), Bradya sp. (Arthropoda), Humulus lupulus (Ascomycota), Ophiosphaerella herpotricha (Ascomycota), Stemphylium vesicarium (Ascomycota), Curvularia kusanoi (Ascomycota), Bipolaris maydis (Ascomycota), Graminopassalora graminis (Ascomycota), Hortaea werneckii (Ascomycota), Sugiyamaella sp. (Ascomycota), Aspergillus wentii (Ascomycota), Debaryomyces udenii (Ascomycota), [Candida] atlantica (Ascomycota), Candida sp. (Ascomycota), Ascochyta viciae-pannonicae (Ascomycota), Filobasidium floriforme (Basidiomycota), Malassezia restricta (Basidiomycota), Malassezia globosa (Basidiomycota), Cryptococcus sp. (Basidiomycota), uncultured fungus 163665 (Basidiomycota), uncultured Tremellomycetes 608923 (Basidiomycota), Megalocystidium leucoxanthum (Basidiomycota), Dentipellis separans (Basidiomycota), Genolevuria tibetensis (Basidiomycota), Pseudobodo tremulans (Bicosoecida), Amathia sp. (Bryozoa), Chlamydaster sterni (Centrohelida), metagenome (Centrohelida), Pterocystis sp. (Centrohelida), uncultured marine 15485 (Cercozoa), Paradinium poucheti (Cercozoa), Allantion sp. (Cercozoa), Gromia oviformis (Cercozoa), marine metagenome (Cercozoa), uncultured eukaryote 599017 (Cercozoa), Pseudopirsonia mucosa (Cercozoa), uncultured Cercozoa 610590 (Cercozoa), Haplosporidian parasite (Cercozoa), uncultured eukaryote 609940 (Cercozoa), Gymnophrys sp. (Cercozoa), Phaseoleae environmental (Cercozoa), uncultured eukaryote 607851 (Cercozoa), uncultured marine 609925 (Cercozoa), uncultured Cercozoa 610240 (Cercozoa), uncultured eukaryote 612714 (Cercozoa), uncultured Thaumatomonadida 612724 (Cercozoa), uncultured marine 613894 (Cercozoa), uncultured eukaryote 613897 (Cercozoa), uncultured eukaryote 613965 (Cercozoa), uncultured marine 614010 (Cercozoa), uncultured Chytridiomycota 610236 (Chytridiomycota), Olpidium brassicae (Chytridiomycota), Miamiensis avidus (Ciliophora), Holosticha cf. (Ciliophora), Protocruzia adherens (Ciliophora), Cinetochilum ovale (Ciliophora), Aristerostoma sp. (Ciliophora), Aspidisca aculeata (Ciliophora), Glauconema trihymene (Ciliophora), uncultured Tintinnida 599011 (Ciliophora), Philaster sinensis (Ciliophora), Paradiophrys irmgard (Ciliophora), Metanophrys sinensis (Ciliophora), Arcuseries petzi (Ciliophora), uncultured eukaryote 612670 (Ciliophora), uncultured eukaryote 612720 (Ciliophora), Euplotes charon (Ciliophora), Pandea sp. (Cnidaria), Diadumene leucolena (Cnidaria), Astrangia poculata (Cnidaria), Sarsia lovenii (Cnidaria), Hydractinia sp. (Cnidaria), Lizzia blondina (Cnidaria), Stephanocoenia intersepta (Cnidaria), Leptoria phrygia (Cnidaria), Stylophora pistillata (Cnidaria), Phyllangia mouchezii (Cnidaria), uncultured eukaryote 614004 (Cnidaria), uncultured eukaryote 614005 (Cnidaria), uncultured eukaryote 614006 (Cnidaria), Porpita porpita (Cnidaria), Clavactinia serrata (Cnidaria), Podocoryna exigua (Cnidaria), Cordylophora caspia (Cnidaria), Psammodictyon constrictum (Diatomea), uncultured eukaryote 6222 (Diatomea), uncultured eukaryote 152348 (Diatomea), uncultured eukaryote 206394 (Diatomea), uncultured eukaryote 607809 (Diatomea), uncultured marine 206365 (Diatomea), uncultured eukaryote 607901 (Diatomea), uncultured eukaryote 152458 (Diatomea), uncultured eukaryote 607950 (Diatomea), uncultured marine 607781 (Diatomea), uncultured eukaryote 607981 (Diatomea), Amphora coffeiformis (Diatomea), Nitzschia sp. (Diatomea), uncultured eukaryote 52878 (Diatomea), Cocconeis cf. (Diatomea), uncultured marine 608239 (Diatomea), uncultured eukaryote 608275 (Diatomea), uncultured eukaryote 608359 (Diatomea), Navicula arenaria (Diatomea), Haslea ostrearia (Diatomea), uncultured eukaryote 607841 (Diatomea), uncultured eukaryote 608434 (Diatomea), Pseudogomphonema sp. (Diatomea), uncultured stramenopile 206434 (Diatomea), uncultured eukaryote 608770 (Diatomea), uncultured stramenopile 404930 (Diatomea), uncultured marine 607793 (Diatomea), uncultured marine 608864 (Diatomea), uncultured eukaryote 609203 (Diatomea), uncultured marine 609044 (Diatomea), Amphora sp. (Diatomea), uncultured eukaryote 609302 (Diatomea), Craticula pseudocitrus (Diatomea), uncultured marine 608605 (Diatomea), Haslea spicula (Diatomea), Navicula reinhardtii (Diatomea), Sellaphora cf. (Diatomea), uncultured stramenopile 609560 (Diatomea), uncultured eukaryote 609592 (Diatomea), Thalassiosira hendeyi (Diatomea), uncultured marine 608676 (Diatomea), Nitzschia communis (Diatomea), Nitzschia sigma (Diatomea), uncultured eukaryote 609712 (Diatomea), uncultured eukaryote 609713 (Diatomea), uncultured eukaryote 609714 (Diatomea), uncultured stramenopile 609767 (Diatomea), uncultured marine 609768 (Diatomea), uncultured eukaryote 56 (Diatomea), uncultured marine 44304 (Diatomea), Cocconeis stauroneiformis (Diatomea), uncultured stramenopile 403015 (Diatomea), uncultured eukaryote 607920 (Diatomea), uncultured marine 609731 (Diatomea), uncultured eukaryote 609934 (Diatomea), uncultured eukaryote 145663 (Diatomea), uncultured eukaryote 206444 (Diatomea), uncultured marine 608176 (Diatomea), uncultured eukaryote 609936 (Diatomea), uncultured eukaryote 610228 (Diatomea), uncultured eukaryote 610229 (Diatomea), uncultured stramenopile 610312 (Diatomea), Stauroneis kriegeri (Diatomea), uncultured eukaryote 610314 (Diatomea), uncultured marine 45551 (Diatomea), uncultured eukaryote 141758 (Diatomea), uncultured eukaryote 141765 (Diatomea), uncultured eukaryote 434661 (Diatomea), uncultured marine 608318 (Diatomea), uncultured marine 608818 (Diatomea), Bacillariophyta sp. (Diatomea), uncultured eukaryote 610571 (Diatomea), uncultured stramenopile 610574 (Diatomea), Guinardia flaccida (Diatomea), uncultured eukaryote 610688 (Diatomea), uncultured marine 610689 (Diatomea), uncultured eukaryote 610690 (Diatomea), uncultured marine 610703 (Diatomea), Bacillaria paxillifer (Diatomea), uncultured marine 206774 (Diatomea), uncultured marine 405988 (Diatomea), uncultured eukaryote 415529 (Diatomea), uncultured marine 481490 (Diatomea), uncultured eukaryote 554181 (Diatomea), uncultured marine 593085 (Diatomea), uncultured marine 608034 (Diatomea), uncultured eukaryote 608140 (Diatomea), uncultured marine 608539 (Diatomea), uncultured marine 609227 (Diatomea), uncultured marine 609300 (Diatomea), uncultured marine 609653 (Diatomea), uncultured marine 609873 (Diatomea), uncultured eukaryote 610257 (Diatomea), Tryblionella apiculata (Diatomea), uncultured eukaryote 610572 (Diatomea), uncultured eukaryote 610573 (Diatomea), uncultured stramenopile 610608 (Diatomea), Navicula tripunctata (Diatomea), uncultured eukaryote 611180 (Diatomea), uncultured stramenopile 611183 (Diatomea), uncultured eukaryote 611184 (Diatomea), uncultured marine 611439 (Diatomea), uncultured marine 611456 (Diatomea), uncultured eukaryote 611457 (Diatomea), uncultured eukaryote 611460 (Diatomea), uncultured stramenopile 611461 (Diatomea), uncultured eukaryote 611466 (Diatomea), uncultured stramenopile 611470 (Diatomea), uncultured eukaryote 611483 (Diatomea), uncultured eukaryote 611491 (Diatomea), uncultured eukaryote 611495 (Diatomea), uncultured marine 611503 (Diatomea), Convoluta convoluta (Diatomea), uncultured marine 55130 (Diatomea), uncultured marine 208688 (Diatomea), uncultured marine 273045 (Diatomea), Craticula molestiformis (Diatomea), uncultured eukaryote 403207 (Diatomea), uncultured eukaryote 416857 (Diatomea), uncultured marine 423952 (Diatomea), uncultured eukaryote 489647 (Diatomea), uncultured marine 608274 (Diatomea), uncultured marine 608480 (Diatomea), Fragilaria barbararum (Diatomea), uncultured marine 608787 (Diatomea), uncultured marine 609049 (Diatomea), uncultured marine 609491 (Diatomea), uncultured marine 609703 (Diatomea), uncultured eukaryote 609711 (Diatomea), uncultured marine 609933 (Diatomea), uncultured marine 609955 (Diatomea), Undatella sp. (Diatomea), uncultured marine 610927 (Diatomea), uncultured marine 611174 (Diatomea), uncultured eukaryote 611175 (Diatomea), uncultured eukaryote 611181 (Diatomea), Asterionella glacialis (Diatomea), Nitzschia vitrea (Diatomea), uncultured eukaryote 611321 (Diatomea), Hippodonta capitata (Diatomea), uncultured marine 611394 (Diatomea), uncultured eukaryote 611454 (Diatomea), uncultured eukaryote 611459 (Diatomea), Nitzschia cf. (Diatomea), uncultured eukaryote 612651 (Diatomea), uncultured marine 612652 (Diatomea), uncultured marine 612653 (Diatomea), uncultured marine 612654 (Diatomea), Navicula sp. (Diatomea), uncultured eukaryote 612661 (Diatomea), uncultured eukaryote 612663 (Diatomea), uncultured marine 612673 (Diatomea), uncultured eukaryote 612683 (Diatomea), uncultured eukaryote 612689 (Diatomea), uncultured marine 612693 (Diatomea), uncultured marine 612697 (Diatomea), Actinella sp. (Diatomea), Nitzschia longissima (Diatomea), uncultured eukaryote 612708 (Diatomea), uncultured marine 612713 (Diatomea), uncultured marine 612723 (Diatomea), uncultured marine 613655 (Diatomea), uncultured eukaryote 613657 (Diatomea), uncultured eukaryote 613666 (Diatomea), uncultured eukaryote 613672 (Diatomea), uncultured eukaryote 613679 (Diatomea), uncultured eukaryote 613680 (Diatomea), uncultured marine 613689 (Diatomea), uncultured marine 613699 (Diatomea), uncultured eukaryote 613730 (Diatomea), uncultured eukaryote 613732 (Diatomea), uncultured marine 613733 (Diatomea), uncultured eukaryote 613735 (Diatomea), uncultured marine 613737 (Diatomea), uncultured eukaryote 613739 (Diatomea), uncultured stramenopile 613740 (Diatomea), uncultured marine 613741 (Diatomea), uncultured stramenopile 613742 (Diatomea), Navicula salinicola (Diatomea), uncultured eukaryote 613745 (Diatomea), uncultured stramenopile 613746 (Diatomea), uncultured stramenopile 613747 (Diatomea), uncultured eukaryote 613751 (Diatomea), uncultured stramenopile 613752 (Diatomea), uncultured stramenopile 613760 (Diatomea), uncultured stramenopile 613769 (Diatomea), uncultured marine 613772 (Diatomea), uncultured marine 613773 (Diatomea), uncultured stramenopile 613777 (Diatomea), Navicula veneta (Diatomea), uncultured eukaryote 613840 (Diatomea), uncultured marine 613847 (Diatomea), uncultured eukaryote 613851 (Diatomea), uncultured eukaryote 613853 (Diatomea), uncultured eukaryote 613854 (Diatomea), uncultured eukaryote 613877 (Diatomea), uncultured marine 613878 (Diatomea), uncultured eukaryote 613883 (Diatomea), uncultured eukaryote 613885 (Diatomea), uncultured marine 613893 (Diatomea), uncultured eukaryote 613934 (Diatomea), uncultured eukaryote 613957 (Diatomea), uncultured marine 613966 (Diatomea), uncultured marine 613967 (Diatomea), uncultured stramenopile 613970 (Diatomea), uncultured eukaryote 613973 (Diatomea), uncultured eukaryote 613979 (Diatomea), uncultured marine 613983 (Diatomea), Rossia sp. (Diatomea), Nitzschia palea (Diatomea), Craticula cuspidata (Diatomea), uncultured eukaryote 613989 (Diatomea), Fistulifera saprophila (Diatomea), uncultured eukaryote 614019 (Diatomea), uncultured marine 614034 (Diatomea), uncultured marine 614047 (Diatomea), uncultured eukaryote 614060 (Diatomea), uncultured eukaryote 614061 (Diatomea), uncultured marine 614104 (Diatomea), uncultured eukaryote 608614 (Dinoflagellata), Coolia sp. (Dinoflagellata), uncultured eukaryote 61173 (Dinoflagellata), uncultured eukaryote 206378 (Dinoflagellata), uncultured eukaryote 609278 (Dinoflagellata), uncultured eukaryote 609512 (Dinoflagellata), Symbiodinium sp. (Dinoflagellata), uncultured eukaryote 609665 (Dinoflagellata), Amphidinium sp. (Dinoflagellata), Ostreopsis cf. (Dinoflagellata), Bysmatrum arenicola (Dinoflagellata), Symbiodinium microadriaticum (Dinoflagellata), Pfiesteria-like sp. (Dinoflagellata), uncultured eukaryote 609663 (Dinoflagellata), uncultured eukaryote 610613 (Dinoflagellata), uncultured eukaryote 610640 (Dinoflagellata), uncultured eukaryote 611189 (Dinoflagellata), uncultured eukaryote 612672 (Dinoflagellata), uncultured eukaryote 612717 (Dinoflagellata), Dinophyceae sp. (Dinoflagellata), uncultured eukaryote 613766 (Dinoflagellata), uncultured eukaryote 613782 (Dinoflagellata), uncultured eukaryote 613822 (Dinoflagellata), uncultured eukaryote 613824 (Dinoflagellata), uncultured eukaryote 613923 (Dinoflagellata), Isopora togianensis (Dinoflagellata), Polarella glacialis (Dinoflagellata), uncultured eukaryote 613982 (Dinoflagellata), uncultured eukaryote 614011 (Dinoflagellata), uncultured eukaryote 614029 (Dinoflagellata), uncultured eukaryote 614048 (Dinoflagellata), uncultured eukaryote 614074 (Dinoflagellata), Pfiesteria-like dinoflagellate (Dinoflagellata), Cryptoperidiniopsis brodyi (Dinoflagellata), metagenome (Dinoflagellata), uncultured eukaryote 614095 (Dinoflagellata), Diplonema sp. (Euglenozoa), Rhynchopus sp. (Euglenozoa), Bodonidae sp. (Euglenozoa), Petalomonas cantuscygni (Euglenozoa), uncultured kinetoplastid 13113 (Euglenozoa), marine metagenome (Euglenozoa), Notosolenus urceolatus (Euglenozoa), Ulvophyceae sp. (Eukaryota), uncultured marine 1786 (Eukaryota), uncultured marine 607973 (Eukaryota), Paraphysomonas imperforata (Eukaryota), Phaeophila dendroides (Eukaryota), metagenome (Eukaryota), uncultured eukaryote 3043 (Eukaryota), uncultured marine 608518 (Eukaryota), uncultured marine 608700 (Eukaryota), uncultured eukaryote 1494 (Eukaryota), uncultured marine 609125 (Eukaryota), uncultured eukaryote 497070 (Eukaryota), Paramoeba aestuarina (Eukaryota), Ulvella repens (Eukaryota), Halothrix ambigua (Eukaryota), Costaria costata (Eukaryota), uncultured eukaryote 608639 (Eukaryota), Salpingoeca kvevrii (Eukaryota), uncultured marine 609993 (Eukaryota), Ulvella viridis (Eukaryota), Monosiga brevicollis (Eukaryota), Symbiochloris sp. (Eukaryota), Cladophora socialis (Eukaryota), uncultured eukaryote 609865 (Eukaryota), Chlamydomonas sp. (Eukaryota), Chaetomorpha sp. (Eukaryota), uncultured marine 610704 (Eukaryota), eukaryote clone (Eukaryota), Lithotrichon pulchrum (Eukaryota), Aureoumbra lagunensis (Eukaryota), Ectocarpus siliculosus (Eukaryota), Rhinomonas pauca (Eukaryota), Scytosiphon lomentaria (Eukaryota), Paraphysomonas bandaiensis (Eukaryota), Paraphysomonas sp. (Eukaryota), uncultured marine 611447 (Eukaryota), uncultured marine 611471 (Eukaryota), Smithsoniella earleae (Eukaryota), uncultured marine 611498 (Eukaryota), Picochlorum maculatum (Eukaryota), Tetraselmis convolutae (Eukaryota), Prasinoderma coloniale (Eukaryota), Platyamoeba contorta (Eukaryota), Ministeria vibrans (Eukaryota), uncultured marine 282170 (Eukaryota), Lunachloris lukesovae (Eukaryota), uncultured eukaryote 602594 (Eukaryota), uncultured stramenopile 610140 (Eukaryota), uncultured eukaryote 611242 (Eukaryota), Ruthnielsenia tenuis (Eukaryota), uncultured marine 612655 (Eukaryota), uncultured marine 612668 (Eukaryota), Sphaeroforma tapetis (Eukaryota), Salpingoeca tuba (Eukaryota), uncultured marine 612702 (Eukaryota), uncultured marine 613678 (Eukaryota), uncultured marine 613681 (Eukaryota), Paraphysomonas hebes (Eukaryota), uncultured marine 613684 (Eukaryota), Akkesiphycus lubricum (Eukaryota), Tribonema marinum (Eukaryota), uncultured marine 613694 (Eukaryota), uncultured eukaryote 613704 (Eukaryota), Desmarestia viridis (Eukaryota), Phaeosiphoniella cryophila (Eukaryota), uncultured marine 613787 (Eukaryota), Spumella-like flagellate (Eukaryota), uncultured marine 613884 (Eukaryota), Bolbocoleon piliferum (Eukaryota), Ulva sp. (Eukaryota), uncultured Chlorophyta 613910 (Eukaryota), Pseudendoclonium submarinum (Eukaryota), Blidingia dawsonii (Eukaryota), Ulvaria splendens (Eukaryota), uncultured Dunaliellaceae 613928 (Eukaryota), uncultured marine 613997 (Eukaryota), uncultured marine 614088 (Eukaryota), uncultured marine 614099 (Eukaryota), uncultured Corallinales 258406 (Florideophycidae), uncultured Corallinales 608143 (Florideophycidae), Rhodopeltis borealis (Florideophycidae), Dumontia simplex (Florideophycidae), uncultured Corallinales 314951 (Florideophycidae), uncultured Corallinales 327382 (Florideophycidae), Polyopes tenuis (Florideophycidae), uncultured Corallinales 609446 (Florideophycidae), uncultured Corallinales 609595 (Florideophycidae), uncultured Corallinales 609431 (Florideophycidae), uncultured Corallinales 609286 (Florideophycidae), uncultured Corallinales 609946 (Florideophycidae), uncultured Corallinales 609997 (Florideophycidae), uncultured Corallinales 609998 (Florideophycidae), Cordylecladia erecta (Florideophycidae), Hydrolithon cf. (Florideophycidae), uncultured Corallinales 610273 (Florideophycidae), uncultured Corallinales 610710 (Florideophycidae), Weeksia coccinea (Florideophycidae), Naccaria wiggii (Florideophycidae), uncultured Corallinales 610715 (Florideophycidae), uncultured Corallinales 611444 (Florideophycidae), uncultured Corallinales 611492 (Florideophycidae), Ramicrusta textilis (Florideophycidae), Prionitis lyallii (Florideophycidae), uncultured Corallinales 611515 (Florideophycidae), Lithophyllum pustulatum (Florideophycidae), uncultured Corallinales 613662 (Florideophycidae), uncultured Corallinales 613731 (Florideophycidae), uncultured Corallinales 613753 (Florideophycidae), uncultured Corallinales 613799 (Florideophycidae), uncultured Corallinales 613810 (Florideophycidae), uncultured Corallinales 613831 (Florideophycidae), uncultured Corallinales 613898 (Florideophycidae), uncultured Corallinales 613924 (Florideophycidae), uncultured Corallinales 613960 (Florideophycidae), uncultured Corallinales 614008 (Florideophycidae), uncultured Corallinales 614012 (Florideophycidae), Corallinales sp. (Florideophycidae), uncultured Corallinales 614052 (Florideophycidae), Ellisolandia elongata (Florideophycidae), uncultured Corallinales 614054 (Florideophycidae), uncultured Corallinales 614065 (Florideophycidae), uncultured stramenopile 21358 (Labyrinthulomycetes), uncultured eukaryote 72 (Labyrinthulomycetes), Schizochytrium minutum (Labyrinthulomycetes), Stellarchytrium dubum (Labyrinthulomycetes), uncultured eukaryote 608511 (Labyrinthulomycetes), uncultured eukaryote 32733 (Labyrinthulomycetes), unidentified (Labyrinthulomycetes), Labyrinthuloides minuta (Labyrinthulomycetes), uncultured marine 1339 (Labyrinthulomycetes), uncultured eukaryote 2090 (Labyrinthulomycetes), Thraustochytrium multirudimentale (Labyrinthulomycetes), uncultured eukaryote 608475 (Labyrinthulomycetes), uncultured eukaryote 1294 (Labyrinthulomycetes), uncultured marine 2482 (Labyrinthulomycetes), uncultured marine 608343 (Labyrinthulomycetes), Oblongichytrium sp. (Labyrinthulomycetes), Thraustochytriidae sp. (Labyrinthulomycetes), uncultured eukaryote 29232 (Labyrinthulomycetes), uncultured marine 608240 (Labyrinthulomycetes), Thraustochytrium sp. (Labyrinthulomycetes), uncultured marine 611450 (Labyrinthulomycetes), uncultured eukaryote 611482 (Labyrinthulomycetes), uncultured marine 611493 (Labyrinthulomycetes), Aplanochytrium stocchinoi (Labyrinthulomycetes), uncultured marine 609026 (Labyrinthulomycetes), uncultured eukaryote 613658 (Labyrinthulomycetes), uncultured eukaryote 613693 (Labyrinthulomycetes), uncultured eukaryote 613855 (Labyrinthulomycetes), uncultured marine 613858 (Labyrinthulomycetes), uncultured eukaryote 613859 (Labyrinthulomycetes), uncultured eukaryote 613860 (Labyrinthulomycetes), uncultured eukaryote 613862 (Labyrinthulomycetes), uncultured marine 613864 (Labyrinthulomycetes), uncultured eukaryote 613865 (Labyrinthulomycetes), uncultured eukaryote 613867 (Labyrinthulomycetes), uncultured eukaryote 613868 (Labyrinthulomycetes), uncultured marine 614018 (Labyrinthulomycetes), uncultured marine 614055 (Labyrinthulomycetes), uncultured marine 614098 (Labyrinthulomycetes), Deontolaimus sp. (Nematozoa), Chromadorita leuckarti (Nematozoa), Desmoscolex sp. (Nematozoa), Cucumis sativus (Phragmoplastophyta), Fissidens taxifolius (Phragmoplastophyta), Pottia environmental (Phragmoplastophyta), Dawsonia superba (Phragmoplastophyta), Spirastrella sp. (Porifera), Leucandra nicolae (Porifera), Clathrina aff. (Porifera), Grantiopsis heroni (Porifera), Aphroceras sp. (Porifera), Leucetta sp. (Porifera), Clathrina sp. (Porifera), Tedania sp. (Porifera), Mycale sp. (Porifera), uncultured eukaryote 610707 (Protalveolata), uncultured marine 608142 (Protalveolata), Chromera velia (Protalveolata), uncultured eukaryote 613754 (Protalveolata), uncultured eukaryote 614093 (Protalveolata), Chromerida sp. (uncultured), uncultured eukaryote 611473 (uncultured), uncultured eukaryote 607829 (uncultured)

Complete List of Microbes Identified

This list includes all microbes (Bacteria & Archae) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Unclassified Nostocaceae 110929, Unclassified Xenococcaceae 9365, Unclassified Bacteria 12277, Unclassified Bacteria 99482, Unclassified Bacteria 791, Calothrix sp., Unclassified Nostocaceae 429071, Unclassified Bacteria 3485, Unclassified Bacteria 27069, Brachybacterium sp., Rubellimicrobium sp., Unclassified Bacteria 50435, Unclassified Bacteria 68240, Unclassified Bacteria 30, Unclassified Bacteria 26049, Unclassified Hyphomicrobiaceae 9813, Unclassified Piscirickettsiaceae 139944, Unclassified Hyphomicrobiaceae 1489, Nitrosopumilus sp., Brevibacterium sp., Unclassified Bacteria 1800, Rudanella sp., Unclassified Piscirickettsiaceae 334, Unclassified Micrococcaceae 429079, Sphingomonas sp., Truepera sp., Unclassified Bacteria 219179, Unclassified Xenococcaceae 429082, Unclassified Intrasporangiaceae 44237, Unclassified Bacteria 36004, Glaciecola sp., Unclassified Kineosporiaceae 429085, Unclassified Bacteria 9721, Unclassified Comamonadaceae 429093, Unclassified Hyphomicrobiaceae 3790, Inquilinus sp., Microbulbifer elongatus, Spirosoma sp., Unclassified Bacteria 265335, Unclassified Colwelliaceae 717, Marinobacter sp., Unclassified Bacteria 218850, Bacillus sp., Unclassified Acetobacteraceae 202081, Unclassified Bacteria 14517, Curtobacterium sp., Unclassified Bacteria 93586, Staphylococcus aureus, Roseivirga sp., Unclassified Oleiphilaceae 175, Unclassified Bacteria 949, Desulfococcus sp., Unclassified Bacteria 362805, Unclassified Kineosporiaceae 429133, Unclassified Bacteria 81096, Unclassified Bacteria 429072, Unclassified Nostocaceae 429141, Methylobacterium sp., Unclassified Bacteria 65779, Unclassified Lachnospiraceae 258011, Unclassified NB1-i 409904, Unclassified Bacteria 409905, Unclassified Bacteria 265466, Unclassified Alteromonadaceae 230672, Unclassified Acetobacteraceae 117901, Unclassified Bacteria 11399, Hymenobacter sp., Unclassified Nocardioidaceae 75772, Unclassified Rhodospirillaceae 255, Xenococcus sp., Vibrio sp., Unclassified Nitrospiraceae 10234, Alteromonas sp., Unclassified Bacteria 150, Unclassified Bacteria 547, Unclassified Coxiellaceae 66758, Unclassified Flammeovirgaceae 88338, Corynebacterium sp., Acinetobacter sp., Unclassified Flavobacteriaceae 328, Unclassified Bacteria 12806, Unclassified Flavobacteriaceae 26959, Unclassified Oleiphilaceae 429180, Mycobacterium sp., Clostridium sp., Brevibacillus reuszeri, Unclassified Bacteria 429223, Unclassified Bacteria 1173, Unclassified Pirellulaceae 409980, Aquimarina sp., Unclassified Ruminococcaceae 196673, Unclassified Bacteria 197114, Francisella sp., Unclassified Clostridiaceae 287373, Unclassified Nocardioidaceae 429268, Unclassified Xenococcaceae 43854, Chryseobacterium sp., Pseudoalteromonas sp., Unclassified koll13 61095, Unclassified Bacteria 224962, Unclassified Bacteria 311942, Oceanospirillum sp., Unclassified Bacteria 359, Unclassified Bacteria 10172, Unclassified Pirellulaceae 28028, Coraliomargarita sp., Unclassified Oceanospirillaceae 429321, Planctomyces sp., Achromobacter sp., Unclassified Bacteria 43432, Amphritea sp., Unclassified Bacteria 429333, Unclassified Nostocaceae 429334, Fluviicola sp., Staphylococcus sciuri, Unclassified Hyphomicrobiaceae 410155, Unclassified Nostocaceae 429347, Unclassified Sphingomonadaceae 429348, Unclassified Ellin6075 156405, Bacteriovorax sp., Unclassified Hyphomicrobiaceae 410185, Unclassified Bacteria 429365, Unclassified Kineosporiaceae 429367, Unclassified Saprospiraceae 69158, A17 sp., Unclassified Bacteria 410212, Unclassified Ulvophyceae 410213, Unclassified Verrucomicrobiaceae 429387, Unclassified Hyphomonadaceae 290, BD2-13 sp., Unclassified Flammeovirgaceae 19043, Unclassified Colwelliaceae 61827, Unclassified Bacteria 114522, Unclassified Cohaesibacteraceae 410256, Unclassified Bacteria 410257, Unclassified Piscirickettsiaceae 410258, Unclassified Colwelliaceae 429073, Unclassified Bacteria 429410, Unclassified Intrasporangiaceae 429411, Thalassospira xiamenensis, Unclassified Phycisphaeraceae 141887, Unclassified Bacteria 429433, Unclassified Bacteria 429434, Unclassified Oceanospirillaceae 429436, Unclassified Pirellulaceae 977, Unclassified koll13 93630, Unclassified Nostocaceae 429458, Unclassified Bacteria 152885, Unclassified Flavobacteriaceae 410456, Unclassified Flammeovirgaceae 410471, Unclassified Bacteria 429489, Unclassified Nostocaceae 429490, Unclassified Xenococcaceae 429491, Unclassified Nostocaceae 429492, Unclassified Colwelliaceae 26532, Unclassified Syntrophobacteraceae 40595, Unclassified Saprospiraceae 64146, Unclassified Bacteria 88113, Luteimonas sp., Weissella viridescens, Unclassified Nitrospiraceae 410564, Unclassified Oleiphilaceae 429388, Unclassified Nostocaceae 429523, Unclassified Nostocaceae 429524, Unclassified Piscirickettsiaceae 178417, Unclassified Hyphomicrobiaceae 273175, Unclassified Pirellulaceae 410718, Unclassified Cohaesibacteraceae 410719, Unclassified Rhodospirillaceae 410720, Unclassified NB1-i 410750, LCP-26 sp., Unclassified Nostocaceae 429573, Halomonas sp., Unclassified Kineosporiaceae 429579, Unclassified Saprospiraceae 1751, Unclassified Pirellulaceae 26821, Unclassified Piscirickettsiaceae 410948, Unclassified Bacteria 429279, Unclassified Rhodospirillaceae 429639, Unclassified Intrasporangiaceae 429643, Unclassified Bacteria 33862, Unclassified Flavobacteriaceae 122467, Unclassified CV106 411200, Unclassified Bacteria 411202, Unclassified Piscirickettsiaceae 411203, Unclassified Bacteria 411204, Unclassified Bacteria 411255, Unclassified Bacteria 411256, Unclassified Bacteria 411263, Unclassified Nostocaceae 429700, Unclassified Oleiphilaceae 429703, Unclassified Oleiphilaceae 429705, Unclassified Micrococcaceae 429706, Unclassified Comamonadaceae 429707, Neisseria sp., Unclassified Arctic95B-10 14614, Microbulbifer sp., Unclassified Hyphomonadaceae 360297, Unclassified Bacteria 377467, Unclassified Cohaesibacteraceae 411646, Unclassified Bacteria 411647, Unclassified Desulfobulbaceae 411726, Unclassified Flammeovirgaceae 411733, Unclassified Bacteria 429699, Unclassified Bacteria 429789, Unclassified Nostocaceae 429791, Unclassified Rhodospirillaceae 429800, Unclassified Bacteria 429801, Unclassified Kineosporiaceae 429802, Unclassified Desulfobacteraceae 122784, Unclassified Bacteria 392831, Unclassified Archaea 412532, Unclassified Phycisphaeraceae 412533, Unclassified Bacteria 412534, Unclassified Cohaesibacteraceae 412546, Unclassified Bacteria 412553, Unclassified Pirellulaceae 412745, Unclassified Hyphomicrobiaceae 412757, Unclassified Flavobacteriaceae 412761, Unclassified Bacteria 412762, Unclassified Xenococcaceae 412763, Unclassified Xenococcaceae 412764, Unclassified Bacteria 412765, Unclassified Piscirickettsiaceae 412772, Unclassified Bacteria 412773, Unclassified Piscirickettsiaceae 412777, Unclassified Piscirickettsiaceae 412778, Unclassified Bacteria 412782, Unclassified Bacteria 429698, Unclassified Coxiellaceae 429945, Unclassified Acetobacteraceae 429947, Unclassified Hyphomonadaceae 429948, Unclassified Nostocaceae 429953, Unclassified Nostocaceae 429954, Unclassified Nostocaceae 429955, Unclassified Nostocaceae 429956, Unclassified Nostocaceae 429957, Unclassified Nostocaceae 429958, Unclassified Hyphomicrobiaceae 429960, Unclassified Sphingomonadaceae 429964, Unclassified Sphingomonadaceae 429966, Unclassified Nocardioidaceae 429978, Unclassified Ruminococcaceae 429980, Unclassified Oleiphilaceae 689, HTCC sp., Unclassified Piscirickettsiaceae 9883, Unclassified Oleiphilaceae 146979, Unclassified Bacteria 220749, Unclassified Bacteria 267773, Unclassified Legionellaceae 270953, Unclassified Bacteria 272165, Unclassified Bacteria 325573, Unclassified Oleiphilaceae 361691, Unclassified Lachnospiraceae 364244, Unclassified Bacteria 414287, Unclassified Bacteria 414289, Unclassified Piscirickettsiaceae 414297, Unclassified Piscirickettsiaceae 414298, Unclassified Bacteria 414299, Unclassified Bacteria 414303, Unclassified Cohaesibacteraceae 414304, Unclassified Rhodospirillaceae 414305, Unclassified Piscirickettsiaceae 414308, Unclassified Piscirickettsiaceae 414309, Unclassified Piscirickettsiaceae 414313, Unclassified koll13 414316, Unclassified Pirellulaceae 414611, Unclassified Pirellulaceae 414622, Unclassified Pirellulaceae 414623, Unclassified Hyphomicrobiaceae 414624, Unclassified Hyphomicrobiaceae 414628, Unclassified Piscirickettsiaceae 414629, Unclassified Bacteria 414630, Unclassified Flavobacteriaceae 414632, Unclassified Bacteria 414633, Unclassified Xenococcaceae 414635, Unclassified Xenococcaceae 414636, Unclassified Hyphomicrobiaceae 414641, Unclassified NB1-i 414642, Unclassified Bacteria 414645, Unclassified Bacteria 414651, Unclassified Bacteria 414652, Unclassified Bacteria 414653, Unclassified Pirellulaceae 414654, Unclassified Hyphomicrobiaceae 414656, Unclassified Hyphomicrobiaceae 414657, Unclassified Bacteria 414658, Unclassified Bacteria 414659, Unclassified Piscirickettsiaceae 414660, Marinobacter bryozoorum, Unclassified Piscirickettsiaceae 414666, Unclassified Piscirickettsiaceae 414667, Unclassified Piscirickettsiaceae 414668, Unclassified Hyphomicrobiaceae 414679, Unclassified Syntrophobacteraceae 414680, Unclassified Hyphomicrobiaceae 414685, Unclassified Bacteria 414691, Unclassified Hyphomicrobiaceae 429076, Unclassified Bacteria 430231, Unclassified Nostocaceae 430232, Unclassified Bacteria 430234, Unclassified Bacteria 430235, Unclassified Bacteria 430238, Unclassified Sinobacteraceae 430242, Unclassified Hyphomicrobiaceae 430248, Unclassified Hyphomicrobiaceae 430249, Unclassified Hyphomicrobiaceae 430250, Unclassified Hyphomicrobiaceae 430251, Unclassified Hyphomicrobiaceae 430252, Unclassified Hyphomonadaceae 430253, Unclassified Hyphomonadaceae 430255, Unclassified Bacteria 430256, Bdellovibrio sp., Crocinitomix sp., Unclassified Nostocaceae 430261, Unclassified Xenococcaceae 430264, Unclassified Xenococcaceae 430265, Unclassified Acetobacteraceae 430266, Unclassified Hyphomicrobiaceae 430267, Unclassified Hyphomicrobiaceae 430268, Unclassified Rhodospirillaceae 430272, Unclassified Bacteria 430275, Unclassified Bacteria 430276, Unclassified Sphingomonadaceae 430281, Unclassified Rhodospirillaceae 430284, Unclassified Alteromonadaceae 430301, Unclassified Oceanospirillaceae 430305, Unclassified Bacteria 430306, Unclassified Colwelliaceae 430307, Unclassified Bacteria 430314, Unclassified Oleiphilaceae 430317, Unclassified Bacteria 430324, Unclassified Acetobacteraceae 430331, Unclassified Ruminococcaceae 430333, Unclassified Legionellaceae 430336, Unclassified Kineosporiaceae 430338, Unclassified Micrococcaceae 430340, Unclassified Nocardioidaceae 430342, Unclassified Micrococcaceae 430343, Micrococcus luteus, Micrococcus sp., Unclassified Ruminococcaceae 430352


DNA analysis conducted by AquaBiomics LLC.

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Certificate of Analysis LRS G12.2

Certificate of Analysis: Live Reef Sand, Batch LRS G12.2

lrs.g12.2_Certificate_of_Analysis

    Certificate of Analysis



About this report

This report summarizes the results from DNA analysis of the community growing in a batch of Live Reef Sand. Universal genetic markers were amplified from microbial (prokaryotic) and other (eukaryotic) DNA in the sample, and thousands of individual DNA molecules from this mixture were sequenced. Each sequence was then compared with public DNA databases to identify its origin. This report summarizes the kinds of organisms detected in the sample, with a focus on beneficial microbes, pathogens, and parasites.

Information about this sample

Sample ID lrs.g12.2
Batch Name g04-17-2026
Sample Date 06/15/2026 09:00 AM

Microbial Diversity

This sample contained DNA from 1003 different types of microbes.


This pie chart shows the diversity of each microbial family found in the sample. The size of each slice is proportional to the number of different types (labels on each slice). For clarity, only families with 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Nitrifying Community

Ammonia-Oxidizing Microbes

Nitrosomonadaceae
Type Percent of Community Genus Species
2503 0.03 Unknown Unknown
Cenarchaeaceae
Type Percent of Community Genus Species
2996 0.65 Nitrosopumilus Unknown
73 0.59 Nitrosopumilus Unknown
9677 0.29 Nitrosopumilus Unknown
74696 0.19 Cenarchaeum symbiosum
235801 0.13 Nitrosopumilus Unknown
3535 0.10 Cenarchaeum symbiosum
640 0.09 Nitrosopumilus Unknown
10731 0.06 Unknown Unknown

Nitrite-Oxidizing Bacteria

Nitrospiraceae
Type Percent of Community Genus Species
410564 0.04 Unknown Unknown
The nitrifying community in this sample included 10 different types of microbes.

Bacterial Pathogens

None found.

Complete list of pathogens we screened for:

Eubacterium tarantellae, Lactococcus garvieae, Enterococcus seriolicida, Streptococcus parauberis, Streptococcus iniae, Mycobacterium chelonei, Mycobacterium fortuitum, Mycobacterium marinum, Mycobacterium neoaurum, Nocardia asteroides, Nocardia salmonicida, Nocardia seriolae, Renibacterium salmoninarum, Aeromonas jandaei, Aeromonas salmonicida, Serratia liquefaciens, Chryseobacterium balustinum, Chryseobacterium scophthalmum, Tenacibaculum maritimus, Tenacibaculum ovolyticus, Pasteurella skyensis, Pseudomonas anguilliseptica, Moritella marina, Moritella viscosa, Photobacterium damselae, Shewanella putrefaciens, Vibrio alginolyticus, Vibrio cholerae, Vibrio fischeri, Vibrio furnissii, Vibrio harveyi, Vibrio carchariae, Vibrio trachuri, Vibrio ichthyoenteri, Vibrio logei, Vibrio ordalii, Vibrio pelagius, Vibrio salmonicida, Vibrio splendidus, Halomonas cupida, Piscirickettsia salmonis, Vibrio shiloi, Vibrio coralliilyticus, Vibrio harveyi, Aurantimonas coralicida, Vibrio rotiferianus, Vibrio alginolyticus, Vibrio proteolyticus, Vibrio charcharvina, Serratia marscesens, Aquarickettsia rohweri

Eukaryotic Biodiversity

This sample contained DNA from 2092 different Eukaryotic sources.


This pie chart shows the diversity of each Eukaryotic Phylum detected in the sample. The size of each slice is proportional to the number of different types from each phylum. For clarity, only families with 3 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Parasites

None of the DNA sequences from this sample matched known parasites.
Group Description Percent of eDNA
Amyloodinium Dinoflagellate parasites responsible for the fish disease Marine Velvet 0
Cryptocaryon Ciliate parasites responsible for the fish disease Ich 0
Brooklynella Ciliate parasites responsible for the fish disease Brook 0
Uronema Ciliate parasites responsible for a fish disease called by the same name 0
Phestilla Montipora-eating Nudibranchs 0
Amakusaplana Acropora-eating Flatworms 0
Ancyrocephalidae Flatworms often called Flukes that parasitize fish 0
Gyrodactylidae Flatworms often called Flukes that parasitize fish 0
Capsalidae Flatworms often called Flukes that parasitize fish 0
Turbonilla Snails in the family Pyramidellidae that parasitize giant clams 0
Trichodina A ciliated protozoan parasite of fish 0

Other Animal Pests

None of the DNA sequences from this sample matched known animal pests.
Group Description Percent of eDNA
Aiptasia The glass anemone, a ubiquitous pest 0
Thylacodes Vermetid snails 0
Asterina A group of sea stars that includes coral predators 0

Complete list of Eukaryotes identified

This list includes all Eukaryotes (Animals, Protists, and anything else besides Bacteria or Archaea) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Planomonas micra (Ancyromonadida), uncultured marine 507 (Ancyromonadida), Parapionosyllis elegans (Annelida), Sabellastarte sp. (Annelida), Gregarinidae sp. (Apicomplexa), Foraminifera environmental (Apicomplexa), uncultured eukaryote 599672 (Apicomplexa), uncultured eukaryote 435981 (Apusomonadidae), Fabomonas tropica (Apusomonadidae), Amastigomonas sp. (Apusomonadidae), Zaus caeruleus (Arthropoda), Typhlamphiascus typhlops (Arthropoda), Agaue sp. (Arthropoda), Acarothrix sp. (Arthropoda), uncultured marine 1003 (Arthropoda), Paramphiascella fulvofasciata (Arthropoda), Misophriopsis okinawensis (Arthropoda), Euterpina acutifrons (Arthropoda), uncultured eukaryote 12 (Arthropoda), Phyllochaetopterus sp. (Arthropoda), Rhombognathus areolatus (Arthropoda), uncultured marine 601018 (Arthropoda), uncultured marine 601224 (Arthropoda), Copidognathus sp. (Arthropoda), Nenesidea oligodentata (Arthropoda), uncultured eukaryote 605734 (Arthropoda), Humulus lupulus (Ascomycota), Penicillium griseofulvum (Ascomycota), uncultured eukaryote 6838 (Ascomycota), Ramichloridium musae (Ascomycota), Ascochyta phacae (Ascomycota), Malassezia restricta (Basidiomycota), Malassezia globosa (Basidiomycota), Sporobolomyces roseus (Basidiomycota), Itersonilia pannonica (Basidiomycota), Trametes hirsuta (Basidiomycota), Termitomyces clypeatus (Basidiomycota), Leucoagaricus barssii (Basidiomycota), Pseudobodo tremulans (Bicosoecida), uncultured stramenopile 117178 (Bicosoecida), uncultured eukaryote 603 (Bicosoecida), Bicosoeca vacillans (Bicosoecida), Symbiomonas scintillans (Bicosoecida), metagenome (Centrohelida), uncultured eukaryote 599017 (Cercozoa), marine metagenome (Cercozoa), uncultured eukaryote 599176 (Cercozoa), Lotharella oceanica (Cercozoa), Massisteria marina (Cercozoa), Nuclearia-like filose (Cercozoa), uncultured marine 60804 (Cercozoa), uncultured cercomonad 543448 (Cercozoa), Gymnophrys sp. (Cercozoa), uncultured Cercozoa 54890 (Cercozoa), Esquamula lacrimiformis (Cercozoa), uncultured eukaryote 599817 (Cercozoa), Protaspis sp. (Cercozoa), uncultured marine 599462 (Cercozoa), Haplosporidian parasite (Cercozoa), uncultured eukaryote 599794 (Cercozoa), metagenome (Cercozoa), uncultured eukaryote 206300 (Cercozoa), Minorisa sp. (Cercozoa), Athalamea environmental (Cercozoa), uncultured eukaryote 599393 (Cercozoa), uncultured eukaryote 599499 (Cercozoa), uncultured eukaryote 599555 (Cercozoa), Reticulamoeba sp. (Cercozoa), uncultured eukaryote 5222 (Cercozoa), Pseudopirsonia mucosa (Cercozoa), uncultured marine 573035 (Cercozoa), uncultured eukaryote 599501 (Cercozoa), uncultured eukaryote 599614 (Cercozoa), Bigelowiella natans (Cercozoa), uncultured eukaryote 600150 (Cercozoa), uncultured eukaryote 601318 (Cercozoa), Thaumatomastix sp. (Cercozoa), uncultured eukaryote 602717 (Cercozoa), Protaspis grandis (Cercozoa), uncultured eukaryote 602730 (Cercozoa), uncultured cercomonad 602817 (Cercozoa), Reckertia gemma (Cercozoa), uncultured marine 602820 (Cercozoa), uncultured marine 605849 (Cercozoa), uncultured marine 530552 (Cercozoa), uncultured eukaryote 583217 (Cercozoa), uncultured eukaryote 599974 (Cercozoa), uncultured marine 600669 (Cercozoa), uncultured marine 601015 (Cercozoa), uncultured Cercozoa 601288 (Cercozoa), uncultured eukaryote 601327 (Cercozoa), uncultured eukaryote 601510 (Cercozoa), uncultured Rhizaria 602694 (Cercozoa), uncultured marine 602716 (Cercozoa), uncultured Thaumatomonadida 602720 (Cercozoa), Thaumatomastigidae environmental (Cercozoa), uncultured marine 602739 (Cercozoa), uncultured eukaryote 602816 (Cercozoa), Chlorarachniophyceae sp. (Cercozoa), uncultured eukaryote 602834 (Cercozoa), uncultured eukaryote 604208 (Cercozoa), Metromonas simplex (Cercozoa), uncultured Cercozoa 605806 (Cercozoa), uncultured marine 605812 (Cercozoa), uncultured eukaryote 605822 (Cercozoa), uncultured eukaryote 605823 (Cercozoa), uncultured marine 605831 (Cercozoa), Ventrifissura sp. (Cercozoa), uncultured marine 606045 (Cercozoa), Exuviaella pusilla (Cercozoa), uncultured fungus 30497 (Chytridiomycota), uncultured eukaryote 599368 (Chytridiomycota), uncultured Chytridiomycota 1636 (Chytridiomycota), uncultured Chytridiomycota 71210 (Chytridiomycota), Glauconema trihymene (Ciliophora), Miamiensis avidus (Ciliophora), uncultured eukaryote 599068 (Ciliophora), uncultured eukaryote 32544 (Ciliophora), uncultured eukaryote 314992 (Ciliophora), Vaginicola crystallina (Ciliophora), metagenome (Ciliophora), Apobryophyllum schmidingeri (Ciliophora), Metanophrys sinensis (Ciliophora), Vaginicola sp. (Ciliophora), Pseudoamphisiella quadrinucleata (Ciliophora), Holosticha diademata (Ciliophora), uncultured eukaryote 44326 (Ciliophora), Protocruzia adherens (Ciliophora), Eutintinnus cf. (Ciliophora), Hemigastrostyla enigmatica (Ciliophora), uncultured eukaryote 314695 (Ciliophora), Pseudovorticella paracratera (Ciliophora), Novistrombidium orientale (Ciliophora), uncultured marine 600379 (Ciliophora), uncultured eukaryote 5040 (Ciliophora), Pseudoplatyophrya nana (Ciliophora), uncultured eukaryote 599682 (Ciliophora), Cinetochilum ovale (Ciliophora), Vampyrophrya pelagica (Ciliophora), Lacrymaria marina (Ciliophora), uncultured eukaryote 599860 (Ciliophora), uncultured eukaryote 601007 (Ciliophora), Strombidium rassoulzadegani (Ciliophora), uncultured eukaryote 602635 (Ciliophora), uncultured eukaryote 602636 (Ciliophora), uncultured eukaryote 602785 (Ciliophora), uncultured eukaryote 604126 (Ciliophora), uncultured eukaryote 604137 (Ciliophora), uncultured eukaryote 605789 (Ciliophora), uncultured eukaryote 605866 (Ciliophora), uncultured eukaryote 607576 (Ciliophora), uncultured Chytridiomycota 405300 (Cryptomycota), uncultured fungus 593979 (Cryptomycota), uncultured Chytridiomycota 600371 (Cryptomycota), Pseudogomphonema sp. (Diatomea), Psammodictyon constrictum (Diatomea), uncultured marine 593085 (Diatomea), Cocconeis cf. (Diatomea), Cymbella cistuliformis (Diatomea), Navicula sp. (Diatomea), uncultured eukaryote 6222 (Diatomea), uncultured eukaryote 56 (Diatomea), uncultured marine 403582 (Diatomea), uncultured marine 532023 (Diatomea), Amphora coffeiformis (Diatomea), Bacillariophyta sp. (Diatomea), uncultured marine 599533 (Diatomea), Sellaphora sp. (Diatomea), uncultured marine 152637 (Diatomea), uncultured eukaryote 545382 (Diatomea), Cymatosira belgica (Diatomea), Craticula pseudocitrus (Diatomea), Entomoneis sp. (Diatomea), uncultured marine 60613 (Diatomea), uncultured marine 143831 (Diatomea), Stauroneis kriegeri (Diatomea), uncultured stramenopile 600728 (Diatomea), Nitzschia communis (Diatomea), Paralia sulcata (Diatomea), Amphora sp. (Diatomea), uncultured marine 206774 (Diatomea), uncultured marine 551418 (Diatomea), Haslea spicula (Diatomea), uncultured marine 600146 (Diatomea), uncultured stramenopile 602619 (Diatomea), uncultured marine 602620 (Diatomea), Halamphora subtropica (Diatomea), uncultured marine 6226 (Diatomea), Navicula reinhardtii (Diatomea), uncultured stramenopile 206805 (Diatomea), Nanofrustulum shiloi (Diatomea), uncultured marine 302602 (Diatomea), uncultured marine 315036 (Diatomea), Rhaphoneis sp. (Diatomea), Rossia sp. (Diatomea), uncultured marine 600138 (Diatomea), uncultured stramenopile 600375 (Diatomea), uncultured marine 601325 (Diatomea), uncultured marine 601341 (Diatomea), uncultured marine 601342 (Diatomea), Navicula brockmannii (Diatomea), uncultured eukaryote 602621 (Diatomea), Sellaphora pupula (Diatomea), uncultured marine 602797 (Diatomea), Peridinium balticum (Diatomea), uncultured marine 604184 (Diatomea), Craticula cuspidata (Diatomea), uncultured eukaryote 4908 (Diatomea), uncultured marine 4997 (Diatomea), uncultured eukaryote 32697 (Diatomea), Navicula arenaria (Diatomea), Licmophora sp. (Diatomea), Nitzschia sigma (Diatomea), uncultured eukaryote 206394 (Diatomea), uncultured eukaryote 248209 (Diatomea), uncultured marine 305581 (Diatomea), uncultured eukaryote 308578 (Diatomea), uncultured eukaryote 345551 (Diatomea), Nitzschia cf. (Diatomea), uncultured eukaryote 541458 (Diatomea), Fragilaria capucina (Diatomea), Thalassiosira minima (Diatomea), Amphora proteus (Diatomea), uncultured marine 600374 (Diatomea), Eolimna minima (Diatomea), uncultured marine 600747 (Diatomea), uncultured eukaryote 601009 (Diatomea), uncultured marine 601302 (Diatomea), uncultured marine 601839 (Diatomea), Dimeregramma sp. (Diatomea), uncultured marine 602718 (Diatomea), Amphora cf. (Diatomea), uncultured marine 602804 (Diatomea), uncultured stramenopile 604145 (Diatomea), Convoluta convoluta (Diatomea), uncultured marine 604236 (Diatomea), Haslea ostrearia (Diatomea), uncultured marine 605458 (Diatomea), uncultured eukaryote 605535 (Diatomea), uncultured eukaryote 605539 (Diatomea), Cocconeis placentula (Diatomea), uncultured marine 605546 (Diatomea), uncultured marine 605553 (Diatomea), uncultured stramenopile 605565 (Diatomea), Psammodictyon panduriforme (Diatomea), Pseudostaurosira elliptica (Diatomea), uncultured marine 605657 (Diatomea), uncultured marine 605783 (Diatomea), Licmophora juergensii (Diatomea), Navicula diserta (Diatomea), Bacillaria paxillifer (Diatomea), uncultured eukaryote 605919 (Diatomea), Nitzschia palea (Diatomea), Planothidium frequentissimum (Diatomea), Asterionella glacialis (Diatomea), Cocconeis stauroneiformis (Diatomea), Nitzschia microcephala (Diatomea), uncultured marine 607239 (Diatomea), Pleurosigma sp. (Diatomea), uncultured marine 607277 (Diatomea), uncultured marine 607579 (Diatomea), uncultured marine 402677 (Dinoflagellata), uncultured marine 402679 (Dinoflagellata), Heterocapsa triquetra (Dinoflagellata), Amphidinium steinii (Dinoflagellata), Leiocephalium pseudosanguineum (Dinoflagellata), Prorocentrum micans (Dinoflagellata), uncultured marine 402759 (Dinoflagellata), uncultured marine 280984 (Dinoflagellata), uncultured eukaryote 206378 (Dinoflagellata), uncultured marine 599153 (Dinoflagellata), uncultured eukaryote 600383 (Dinoflagellata), Amphidinium sp. (Dinoflagellata), uncultured marine 402980 (Dinoflagellata), Bysmatrum arenicola (Dinoflagellata), Paragymnodinium shiwhaense (Dinoflagellata), Dinophyceae sp. (Dinoflagellata), uncultured eukaryote 600757 (Dinoflagellata), uncultured eukaryote 601359 (Dinoflagellata), Symbiodinium microadriaticum (Dinoflagellata), uncultured marine 602842 (Dinoflagellata), uncultured eukaryote 604132 (Dinoflagellata), Symbiodinium sp. (Dinoflagellata), uncultured eukaryote 206667 (Dinoflagellata), Polykrikos kofoidii (Dinoflagellata), uncultured eukaryote 314830 (Dinoflagellata), Pfiesteria piscicida (Dinoflagellata), uncultured eukaryote 602618 (Dinoflagellata), uncultured eukaryote 602632 (Dinoflagellata), uncultured eukaryote 602641 (Dinoflagellata), uncultured eukaryote 602735 (Dinoflagellata), uncultured eukaryote 602839 (Dinoflagellata), uncultured marine 602846 (Dinoflagellata), uncultured marine 604150 (Dinoflagellata), uncultured marine 604232 (Dinoflagellata), uncultured eukaryote 604234 (Dinoflagellata), uncultured eukaryote 604274 (Dinoflagellata), uncultured eukaryote 605612 (Dinoflagellata), uncultured eukaryote 605801 (Dinoflagellata), uncultured eukaryote 605827 (Dinoflagellata), uncultured eukaryote 606146 (Dinoflagellata), Pfiesteria-like dinoflagellate (Dinoflagellata), uncultured eukaryote 606153 (Dinoflagellata), uncultured eukaryote 606157 (Dinoflagellata), uncultured marine 607359 (Dinoflagellata), uncultured eukaryote 607534 (Dinoflagellata), uncultured eukaryote 607541 (Dinoflagellata), uncultured marine 607553 (Dinoflagellata), uncultured eukaryote 607556 (Dinoflagellata), Neobodo designis (Euglenozoa), Diplonema sp. (Euglenozoa), Rhynchopus sp. (Euglenozoa), Bodonidae sp. (Euglenozoa), uncultured eukaryote 599113 (Euglenozoa), uncultured eukaryote 599179 (Euglenozoa), Notosolenus urceolatus (Euglenozoa), kinetoplastid flagellate (Euglenozoa), Petalomonas cantuscygni (Euglenozoa), uncultured kinetoplastid 599389 (Euglenozoa), Hemistasia phaeocysticola (Euglenozoa), Diplonemida sp. (Euglenozoa), Kinetoplastida sp. (Euglenozoa), uncultured eukaryote 599740 (Euglenozoa), Hemistasiidae sp. (Euglenozoa), uncultured eukaryote 561276 (Euglenozoa), Rhynchobodo sp. (Euglenozoa), uncultured eukaryote 561213 (Euglenozoa), uncultured euglenozoan 599660 (Euglenozoa), uncultured kinetoplastid 599924 (Euglenozoa), uncultured eukaryote 600061 (Euglenozoa), uncultured kinetoplastid 602850 (Euglenozoa), uncultured kinetoplastid 604288 (Euglenozoa), Diplonema ambulator (Euglenozoa), uncultured eukaryote 524325 (Euglenozoa), uncultured eukaryote 607187 (Euglenozoa), Paraphysomonas imperforata (Eukaryota), Symbiochloris sp. (Eukaryota), uncultured eukaryote 599029 (Eukaryota), metagenome (Eukaryota), Monosiga brevicollis (Eukaryota), Paramoeba aestuarina (Eukaryota), Ciliophrys infusionum (Eukaryota), Phaeophila dendroides (Eukaryota), uncultured eukaryote 599278 (Eukaryota), Picochlorum eukaryotum (Eukaryota), Hazenia basiliensis (Eukaryota), Ulvella repens (Eukaryota), Halothrix ambigua (Eukaryota), uncultured eukaryote 314464 (Eukaryota), Vermistella antarctica (Eukaryota), Paramoeba branchiphila (Eukaryota), Chrysophyceae sp. (Eukaryota), Fibrocapsa japonica (Eukaryota), Chattonella subsalsa (Eukaryota), uncultured stramenopile 599496 (Eukaryota), Dinophyceae sp. (Eukaryota), Pyramimonas olivacea (Eukaryota), Gloeotilopsis planctonica (Eukaryota), uncultured marine 599338 (Eukaryota), uncultured Nannochloris 599981 (Eukaryota), Viridiplantae environmental (Eukaryota), Ulvophyceae sp. (Eukaryota), Tetracystis intermedia (Eukaryota), Pirum gemmata (Eukaryota), Graesiella emersonii (Eukaryota), Haramonas dimorpha (Eukaryota), Parvamoeba rugata (Eukaryota), Rhinomonas pauca (Eukaryota), uncultured prasinophyte 601330 (Eukaryota), uncultured Nannochloris 601360 (Eukaryota), uncultured Chrysophyceae 602593 (Eukaryota), uncultured eukaryote 602594 (Eukaryota), uncultured eukaryote 602596 (Eukaryota), uncultured eukaryote 605513 (Eukaryota), Rhodomonas sp. (Eukaryota), Cladophora socialis (Eukaryota), Stygamoeba regulata (Eukaryota), Ectocarpus siliculosus (Eukaryota), Coccoid pelagophyte (Eukaryota), Paramoeba atlantica (Eukaryota), Bolbocoleon piliferum (Eukaryota), uncultured eukaryote 399017 (Eukaryota), Ulvella viridis (Eukaryota), uncultured eukaryote 436682 (Eukaryota), uncultured stramenopile 533739 (Eukaryota), uncultured Chrysophyceae 535594 (Eukaryota), Hemiselmis brunnescens (Eukaryota), uncultured Nannochloris 599617 (Eukaryota), Hemiselmis sp. (Eukaryota), uncultured eukaryote 600147 (Eukaryota), Paramoeba pemaquidensis (Eukaryota), uncultured eukaryote 601329 (Eukaryota), eukaryotic picoplankton (Eukaryota), uncultured eukaryote 602602 (Eukaryota), uncultured eukaryote 602712 (Eukaryota), uncultured marine 602719 (Eukaryota), Choanoflagellida (Eukaryota), uncultured eukaryote 602769 (Eukaryota), uncultured eukaryote 602788 (Eukaryota), uncultured Nannochloris 602844 (Eukaryota), Pteridomonas danica (Eukaryota), uncultured eukaryote 604187 (Eukaryota), uncultured eukaryote 604253 (Eukaryota), uncultured eukaryote 605440 (Eukaryota), uncultured stramenopile 605501 (Eukaryota), uncultured stramenopile 605508 (Eukaryota), uncultured eukaryote 605510 (Eukaryota), uncultured Paraphysomonas 605514 (Eukaryota), uncultured Paraphysomonas 605515 (Eukaryota), Saccorhiza polyschides (Eukaryota), Tilopteris mertensii (Eukaryota), Smithsoniella earleae (Eukaryota), Pyramimonas tetrarhynchus (Eukaryota), uncultured Chlorophyta 605879 (Eukaryota), uncultured eukaryote 606111 (Eukaryota), uncultured eukaryote 607215 (Eukaryota), uncultured stramenopile 607232 (Eukaryota), uncultured eukaryote 607279 (Eukaryota), Scytosiphon lomentaria (Eukaryota), uncultured eukaryote 607385 (Eukaryota), Pirsonia guinardiae (Incertae_Sedis), Pirsonia verrucosa (Incertae_Sedis), Pirsonia punctigera (Incertae_Sedis), uncultured eukaryote 599819 (Incertae_Sedis), unidentified (Labyrinthulomycetes), Schizochytrium minutum (Labyrinthulomycetes), Oblongichytrium sp. (Labyrinthulomycetes), Thraustochytriidae sp. (Labyrinthulomycetes), Thraustochytrium multirudimentale (Labyrinthulomycetes), Ulkenia profunda (Labyrinthulomycetes), uncultured eukaryote 269 (Labyrinthulomycetes), Thraustochytrium pachydermum (Labyrinthulomycetes), uncultured eukaryote 1294 (Labyrinthulomycetes), uncultured stramenopile 21358 (Labyrinthulomycetes), uncultured marine 1339 (Labyrinthulomycetes), uncultured marine 152829 (Labyrinthulomycetes), uncultured marine 2482 (Labyrinthulomycetes), uncultured marine 60756 (Labyrinthulomycetes), Botryochytrium sp. (Labyrinthulomycetes), uncultured eukaryote 66634 (Labyrinthulomycetes), Thraustochytrium sp. (Labyrinthulomycetes), Stellarchytrium dubum (Labyrinthulomycetes), uncultured eukaryote 258377 (Labyrinthulomycetes), Labyrinthuloides minuta (Labyrinthulomycetes), uncultured eukaryote 2623 (Labyrinthulomycetes), Aplanochytrium stocchinoi (Labyrinthulomycetes), uncultured eukaryote 1958 (Labyrinthulomycetes), uncultured eukaryote 4861 (Labyrinthulomycetes), Aplanochytrium blankum (Labyrinthulomycetes), uncultured stramenopile 22394 (Labyrinthulomycetes), uncultured eukaryote 206390 (Labyrinthulomycetes), uncultured marine 237727 (Labyrinthulomycetes), uncultured eukaryote 338573 (Labyrinthulomycetes), uncultured eukaryote 597875 (Labyrinthulomycetes), uncultured eukaryote 600363 (Labyrinthulomycetes), uncultured eukaryote 601858 (Labyrinthulomycetes), uncultured stramenopile 602749 (Labyrinthulomycetes), uncultured eukaryote 72 (Labyrinthulomycetes), uncultured eukaryote 1117 (Labyrinthulomycetes), uncultured marine 6419 (Labyrinthulomycetes), uncultured eukaryote 106227 (Labyrinthulomycetes), Aplanochytrium kerguelense (Labyrinthulomycetes), uncultured stramenopile 176913 (Labyrinthulomycetes), uncultured eukaryote 381527 (Labyrinthulomycetes), uncultured eukaryote 429522 (Labyrinthulomycetes), uncultured marine 482371 (Labyrinthulomycetes), uncultured eukaryote 599743 (Labyrinthulomycetes), uncultured eukaryote 600738 (Labyrinthulomycetes), uncultured eukaryote 601309 (Labyrinthulomycetes), uncultured stramenopile 602750 (Labyrinthulomycetes), uncultured stramenopile 602751 (Labyrinthulomycetes), uncultured eukaryote 604223 (Labyrinthulomycetes), uncultured eukaryote 604226 (Labyrinthulomycetes), uncultured eukaryote 604238 (Labyrinthulomycetes), uncultured eukaryote 605693 (Labyrinthulomycetes), uncultured eukaryote 605694 (Labyrinthulomycetes), uncultured eukaryote 605700 (Labyrinthulomycetes), uncultured marine 605704 (Labyrinthulomycetes), uncultured marine 605705 (Labyrinthulomycetes), uncultured eukaryote 605752 (Labyrinthulomycetes), uncultured stramenopile 605872 (Labyrinthulomycetes), uncultured eukaryote 606026 (Labyrinthulomycetes), uncultured eukaryote 606069 (Labyrinthulomycetes), uncultured marine 606121 (Labyrinthulomycetes), uncultured eukaryote 607297 (Labyrinthulomycetes), uncultured marine 607298 (Labyrinthulomycetes), uncultured eukaryote 607420 (Labyrinthulomycetes), uncultured eukaryote 1352 (MAST-3), Stephanopyxis turris (MAST-3), uncultured eukaryote 601871 (MAST-3), uncultured eukaryote 605923 (MAST-3), uncultured eukaryote 406 (MAST-3), uncultured eukaryote 602823 (MAST-3), uncultured eukaryote 604207 (MAST-3), uncultured eukaryote 607357 (MAST-3), Iravadia sakaguchii (Mollusca), Hanleyella oldroydi (Mollusca), Truncatella guerinii (Mollusca), Crepidula navicella (Mollusca), Paludinellassiminea japonica (Mollusca), Sabatieria pulchra (Nematozoa), Chromadorita leuckarti (Nematozoa), Camacolaimus sp. (Nematozoa), Desmoscolex sp. (Nematozoa), Deontolaimus sp. (Nematozoa), metagenome (Peronosporomycetes), Haliphthoros sp. (Peronosporomycetes), Halodaphnea panulirata (Peronosporomycetes), Pythium violae (Peronosporomycetes), uncultured eukaryote 325984 (Protalveolata), uncultured marine 438264 (Protalveolata), Chromera velia (Protalveolata), uncultured marine 599973 (Protalveolata), uncultured eukaryote 600066 (Protalveolata), uncultured marine 600677 (Protalveolata), uncultured eukaryote 599477 (Protalveolata), uncultured alveolate 599807 (Protalveolata), uncultured eukaryote 602607 (Protalveolata), uncultured eukaryote 602849 (Protalveolata), uncultured marine 604282 (Protalveolata), uncultured eukaryote 605759 (Protalveolata), uncultured marine 606162 (Protalveolata), Chromerida sp. (uncultured), uncultured alveolate 601357 (uncultured), uncultured eukaryote 607519 (uncultured), uncultured eukaryote 607558 (uncultured)

Complete List of Microbes Identified

This list includes all microbes (Bacteria & Archae) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Bacteriovorax sp., Photobacterium angustum, Vibrio sp., Unclassified Bacteria 126931, Unclassified Bacteria 949, Unclassified Bacteria 27069, Unclassified Bacteriovoracaceae 421397, Photobacterium sp., Unclassified Piscirickettsiaceae 334, Nitrosopumilus sp., Unclassified Bacteria 109140, Unclassified Colwelliaceae 717, Unclassified Vibrionaceae 421420, Unclassified Rhodobacteraceae 67807, Unclassified Bacteria 4294, Unclassified Piscirickettsiaceae 31476, Unclassified Piscirickettsiaceae 106889, Unclassified Bacteria 11399, Unclassified Oceanospirillaceae 265739, Unclassified Oceanospirillaceae 1096, Unclassified Bacteria 421452, Ferrimonas sp., Unclassified Rhodobacteraceae 102, Unclassified Bacteria 9721, Moritella sp., Unclassified Vibrionaceae 389, Unclassified Hyphomicrobiaceae 1489, Unclassified Bacteria 1800, Unclassified Saprospiraceae 1386, Unclassified OM60 99477, Unclassified Oceanospirillaceae 37511, Unclassified Oleiphilaceae 2222, Olleya sp., Unclassified Bacteria 3105, Unclassified Colwelliaceae 26532, Unclassified Piscirickettsiaceae 231772, Unclassified Oleiphilaceae 450, Unclassified Oceanospirillaceae 2545, Unclassified Oceanospirillaceae 13896, Amphritea sp., Unclassified Phyllobacteriaceae 421509, Unclassified Flavobacteriaceae 109192, Unclassified Kordiimonadaceae 200315, Vibrio fortis, Crocinitomix sp., Unclassified Rhodobacteraceae 165881, Unclassified Bacteria 212926, Pseudoalteromonas sp., Unclassified Bacteria 99471, Unclassified Bacteria 68430, Unclassified Bacteria 132680, Unclassified Coxiellaceae 3520, Curtobacterium sp., Unclassified Legionellaceae 409922, Glaciecola sp., Unclassified Rhodobacteraceae 98, Unclassified Erythrobacteraceae 2017, Saprospira sp., Unclassified koll13 61095, Cenarchaeum symbiosum, Unclassified Oceanospirillaceae 421591, Unclassified Bacteria 195182, Unclassified Bacteria 421596, nsmpVI18 sp., Unclassified Bacteria 20436, Unclassified Bacteria 107030, Fluviicola sp., Desulfococcus sp., Unclassified Alteromonadaceae 421610, Unclassified Rhodobacteraceae 2284, Vibrio rumoiensis, Unclassified Pirellulaceae 409980, Unclassified Flavobacteriaceae 570, Unclassified Oceanospirillaceae 918, Unclassified Flavobacteriaceae 31531, Unclassified Flavobacteriaceae 220898, Unclassified Saprospiraceae 293, Oleibacter sp., Loktanella salsilacus, Tenacibaculum sp., Thalassomonas sp., Unclassified Pirellulaceae 122998, Unclassified Bacteria 421682, Marinobacter sp., Unclassified Bacteria 371, Unclassified Bacteria 30, Unclassified Bacteria 1141, Unclassified Pirellulaceae 421713, Unclassified Bacteria 421714, Unclassified Bacteria 551, Unclassified Rhodobacteraceae 1110, Unclassified Bacteria 12806, Unclassified Flavobacteriaceae 52377, Unclassified C111 189335, Unclassified Saccharospirillaceae 267271, Unclassified Oleiphilaceae 689, Unclassified Alteromonadaceae 11743, Unclassified Bacteria 421773, Unclassified Rhodobacteraceae 41, Unclassified Thiotrichaceae 4783, Unclassified Hyphomicrobiaceae 9813, Unclassified Flammeovirgaceae 57967, Unclassified Flavobacteriaceae 85058, Unclassified Bacteria 224962, Unclassified Desulfobulbaceae 37650, Unclassified Thiotrichaceae 248993, Unclassified Bacteria 7289, Unclassified OM60 55175, Bdellovibrio sp., Unclassified Bacteria 230717, Maricaulis sp., Shewanella sp., Unclassified Colwelliaceae 102153, Unclassified Bacteria 421942, Unclassified Bacteria 421943, HTCC sp., Unclassified Bacteria 144724, Unclassified HTCC2089 248274, Unclassified Hyphomicrobiaceae 410155, Unclassified Rhodobacteraceae 14581, Unclassified Bacteria 26049, Unclassified Bacteria 74596, Unclassified Bacteria 129048, Unclassified Saprospiraceae 133438, Desulfosarcina sp., Unclassified wb1_P06 195625, Unclassified Hyphomicrobiaceae 410185, Unclassified Pirellulaceae 422050, Propionigenium sp., Unclassified Bacteria 11063, Coraliomargarita sp., Verrucomicrobium sp., Unclassified Saprospiraceae 69158, A17 sp., Unclassified Flammeovirgaceae 193473, Unclassified Phyllobacteriaceae 1520, Unclassified Bacteria 6932, Aquimarina sp., Unclassified Cohaesibacteraceae 26164, Tepidibacter sp., Unclassified Flavobacteriaceae 85144, Unclassified Bacteria 106950, Unclassified Saprospiraceae 107009, Unclassified Cohaesibacteraceae 410256, Unclassified Bacteria 410257, Unclassified Piscirickettsiaceae 410258, Alcanivorax sp., Unclassified Bacteria 791, Unclassified Simkaniaceae 797, Unclassified Bacteria 904, Unclassified Cenarchaeaceae 10731, Unclassified Bacteria 25299, Unclassified Flavobacteriaceae 25320, Unclassified Pirellulaceae 110863, Unclassified Bacteria 409865, Unclassified Verrucomicrobiaceae 422325, Mycobacterium sp., Marinicella sp., Thalassospira sp., Unclassified Flavobacteriaceae 6743, Unclassified Bacteria 11576, Unclassified Bacteria 16050, BD2-13 sp., Unclassified Flavobacteriaceae 69773, Synechococcus sp., Unclassified koll13 93630, Unclassified Bacteria 189717, Unclassified Bacteria 422472, Staphylococcus aureus, Unclassified Phyllobacteriaceae 2578, Devosia sp., Planctomyces sp., Unclassified Bacteria 28067, Marinomonas sp., Unclassified Bacteriovoracaceae 67724, Unclassified Kiloniellaceae 230561, Unclassified Bacteria 377467, Unclassified Flavobacteriaceae 410456, Unclassified Cyanobacteriaceae 422650, Unclassified Saprospiraceae 422652, Unclassified Bacteria 422655, Unclassified Alteromonadaceae 88, Arcobacter sp., Unclassified Pirellulaceae 14341, Candidatus sp., Unclassified Saprospiraceae 64146, Unclassified Bacteria 88113, Unclassified Rhodospirillaceae 192264, Unclassified OM60 399517, Unclassified Nitrospiraceae 410564, Unclassified Rickettsiaceae 422868, Unclassified Coxiellaceae 422870, Unclassified Alteromonadaceae 422874, Unclassified Alteromonadaceae 422875, Unclassified Cryomorphaceae 422878, Unclassified Flavobacteriaceae 1191, Unclassified Pirellulaceae 2156, Inquilinus sp., Idiomarina sp., Unclassified Bacteria 91199, Unclassified Piscirickettsiaceae 178417, Unclassified Flavobacteriaceae 374319, Unclassified Pirellulaceae 410718, Unclassified Cohaesibacteraceae 410719, Unclassified Rhodospirillaceae 410720, Unclassified Oceanospirillaceae 423171, Unclassified Piscirickettsiaceae 423176, Unclassified Bacteria 423177, Unclassified Rhodospirillaceae 423178, Halomonas sp., Unclassified Flavobacteriaceae 1456, Unclassified Flammeovirgaceae 1479, Unclassified Bacteria 1920, Unclassified Bacteria 85061, Unclassified Oleiphilaceae 185087, Unclassified Flavobacteriaceae 220410, KSA1 sp., Unclassified Bacteria 334125, Unclassified Bacteria 423558, Unclassified Nitrosomonadaceae 2503, Unclassified Flammeovirgaceae 5383, Unclassified Bacteria 11084, Unclassified Bacteria 33059, Unclassified Flammeovirgaceae 224174, Unclassified Bacteria 235403, Unclassified CV106 411200, Unclassified Bacteria 411202, Unclassified Piscirickettsiaceae 411203, Unclassified Bacteria 411204, Unclassified Rhodobacteraceae 424070, Unclassified Verrucomicrobiaceae 424072, Unclassified Bacteria 424073, Unclassified Bacteria 424077, Unclassified Piscirickettsiaceae 424083, Unclassified Bacteria 940, Unclassified Rhodothermaceae 28663, Unclassified Victivallaceae 36286, Unclassified Bacteria 36756, Unclassified Hyphomicrobiaceae 165088, Unclassified Coxiellaceae 258256, Unclassified Flavobacteriaceae 375061, Unclassified Cohaesibacteraceae 411646, Unclassified Bacteria 411647, Unclassified Bacteria 424822, Unclassified Bacteria 424832, Unclassified Piscirickettsiaceae 424837, Unclassified Piscirickettsiaceae 424838, Unclassified Oleiphilaceae 424839, Unclassified Colwelliaceae 424844, Unclassified Flavobacteriaceae 424845, Unclassified ntu14 424847, Unclassified ntu14 424848, Unclassified Bacteria 424849, Unclassified wb1_P06 424850, Unclassified Bacteria 424851, Unclassified Flammeovirgaceae 424853, Unclassified Desulfobulbaceae 424854, Unclassified Bacteria 424857, Unclassified Hyphomonadaceae 290, Sediminibacterium sp., Unclassified Bacteria 10216, Unclassified Bacteria 18188, Propionibacterium acnes, Agrobacterium sp., Acholeplasma sp., Unclassified Saprospiraceae 228223, Unclassified Bacteria 277577, Unclassified Bacteria 374536, Unclassified Bacteria 401765, Unclassified Archaea 412532, Unclassified Phycisphaeraceae 412533, Unclassified Bacteria 412534, Unclassified Cohaesibacteraceae 412546, Unclassified Bacteria 412553, Unclassified Flavobacteriaceae 426097, Brevibacterium sp., Unclassified Verrucomicrobiaceae 426126, Unclassified Oceanospirillaceae 426131, Unclassified Bacteria 426137, Unclassified Bacteria 426138, Unclassified Oceanospirillaceae 426141, Unclassified Oceanospirillaceae 426142, Unclassified Saprospiraceae 426143, Unclassified Rhodobacteraceae 426146, Unclassified Bacteria 426164, Unclassified Piscirickettsiaceae 9883, Unclassified Phyllobacteriaceae 12119, Unclassified Colwelliaceae 61827, Unclassified Rhodobacteraceae 93560, Unclassified Bacteria 108999, Unclassified Oceanospirillaceae 139694, Unclassified Hyphomicrobiaceae 154174, Unclassified Hyphomicrobiaceae 164439, Unclassified Oleiphilaceae 165344, Unclassified Piscirickettsiaceae 190044, Unclassified Oceanospirillaceae 194402, Unclassified Oceanospirillaceae 224955, Unclassified Rhodobacteraceae 267267, Unclassified Colwelliaceae 268100, Unclassified Oceanospirillaceae 271888, Unclassified Phyllobacteriaceae 272551, Unclassified Pirellulaceae 283461, Unclassified Oceanospirillaceae 332444, Unclassified Oleiphilaceae 379114, Unclassified Oceanospirillaceae 394865, Unclassified Bacteria 394955, Unclassified Oleiphilaceae 408371, Unclassified Bacteria 414287, Unclassified Bacteria 414289, Unclassified Piscirickettsiaceae 414297, Unclassified Piscirickettsiaceae 414298, Unclassified Bacteria 414299, Unclassified Bacteria 414303, Unclassified Cohaesibacteraceae 414304, Unclassified Rhodospirillaceae 414305, Unclassified Piscirickettsiaceae 414308, Unclassified Piscirickettsiaceae 414309, Unclassified Piscirickettsiaceae 414313, Unclassified koll13 414316, Unclassified Oceanospirillaceae 428406, Unclassified Colwelliaceae 428407, Unclassified Pirellulaceae 428409, Unclassified Flavobacteriaceae 428410, Unclassified Cryomorphaceae 428411, Unclassified wb1_P06 428412, Unclassified wb1_P06 428413, Unclassified Pirellulaceae 428415, Unclassified Kordiimonadaceae 428416, Unclassified Bacteria 428419, Unclassified Bacteria 428421, Unclassified Rhodobacteraceae 428422, Unclassified Bacteria 428423, Unclassified Rhodobacteraceae 428429, Unclassified Piscirickettsiaceae 428430, Unclassified Oceanospirillaceae 428432, Unclassified Alteromonadaceae 428433, Unclassified Erythrobacteraceae 428441, Unclassified Rhodobacteraceae 428442, Unclassified Bacteria 428443, Unclassified Bacteria 428445, Unclassified Bacteria 428450, Unclassified Phyllobacteriaceae 428452, Unclassified Cohaesibacteraceae 428453, Unclassified Cohaesibacteraceae 428454, Unclassified Colwelliaceae 428469, Unclassified Saprospiraceae 428478, Unclassified Piscirickettsiaceae 428479, Unclassified Flavobacteriaceae 428481, Unclassified Piscirickettsiaceae 428485, Unclassified Piscirickettsiaceae 428486, Unclassified Oceanospirillaceae 428488, Unclassified Bacteria 428489, Unclassified Erythrobacteraceae 428490, Unclassified Bacteria 428491, Unclassified Bacteria 428492, Unclassified Hyphomicrobiaceae 428500, Unclassified Hyphomicrobiaceae 428501, Unclassified Bacteria 428503, Unclassified Bacteria 428506, Unclassified Coxiellaceae 428509, Phaeobacter sp., Unclassified Rhodobacteraceae 428514, Unclassified Rhodobacteraceae 428515, Unclassified Piscirickettsiaceae 428518, Unclassified Simkaniaceae 428523, Unclassified Coxiellaceae 428525, Unclassified Bacteria 428528, Unclassified Bacteria 428529, Unclassified Bacteria 428530, Unclassified Piscirickettsiaceae 428531, Unclassified Oleiphilaceae 428532, Unclassified Piscirickettsiaceae 428533, Unclassified Piscirickettsiaceae 428534, Unclassified Alteromonadaceae 428535, Unclassified Piscirickettsiaceae 428537, Unclassified Oceanospirillaceae 428538, Unclassified Bacteria 428540, Unclassified Bacteria 428541, Unclassified Bacteria 428542, Unclassified Flavobacteriaceae 428543, Unclassified Flammeovirgaceae 428547, Unclassified Rhodobacteraceae 428549, Unclassified Desulfobulbaceae 428551, Unclassified Bacteria 428553, Unclassified Oleiphilaceae 428566, Unclassified Alteromonadaceae 428567, Unclassified Bacteria 428569, Unclassified Simkaniaceae 428572, Unclassified Bacteria 428575, Unclassified Bacteria 428582, Unclassified Oleiphilaceae 428584, Unclassified Desulfobulbaceae 428588, Unclassified Bacteria 428592, Unclassified Oceanospirillaceae 428593


DNA analysis conducted by AquaBiomics LLC.

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Certificate of Analysis LRR G12.2

Certificate of Analysis: Live Reef Rubble, Batch LRR G12.2

lrr.g12.2_Certificate_of_Analysis

    Certificate of Analysis



About this report

This report summarizes the results from DNA analysis of the community growing in and on a batch of Live Reef Rubble. Universal genetic markers were amplified from microbial (prokaryotic) and other (eukaryotic) DNA in the sample, and thousands of individual DNA molecules from this mixture were sequenced. Each sequence was then compared with public DNA databases to identify its origin. This report summarizes the kinds of organisms detected in the sample, with a focus on beneficial microbes, pathogens, and parasites.

Information about this sample

Sample ID lrr.g12.2
Batch Name g04-17-2026
Sample Date 06/15/2026 09:20 AM

Microbial Diversity

This sample contained DNA from 551 different types of microbes.


This pie chart shows the diversity of each microbial family found in the sample. The size of each slice is proportional to the number of different types (labels on each slice). For clarity, only families containing 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Nitrifying Community

Ammonia-Oxidizing Microbes

Cenarchaeaceae
Type Percent of Community Genus Species
108976 1.62 Nitrosopumilus Unknown
2996 0.87 Nitrosopumilus Unknown
73 0.83 Nitrosopumilus Unknown

Nitrite-Oxidizing Bacteria

Nitrospiraceae
Type Percent of Community Genus Species
10234 0.48 Unknown Unknown
The nitrifying community in this sample included 4 different types of microbes.

Bacterial Pathogens

None found.

Complete list of pathogens we screened for:

Eubacterium tarantellae, Lactococcus garvieae, Enterococcus seriolicida, Streptococcus parauberis, Streptococcus iniae, Mycobacterium chelonei, Mycobacterium fortuitum, Mycobacterium marinum, Mycobacterium neoaurum, Nocardia asteroides, Nocardia salmonicida, Nocardia seriolae, Renibacterium salmoninarum, Aeromonas jandaei, Aeromonas salmonicida, Serratia liquefaciens, Chryseobacterium balustinum, Chryseobacterium scophthalmum, Tenacibaculum maritimus, Tenacibaculum ovolyticus, Pasteurella skyensis, Pseudomonas anguilliseptica, Moritella marina, Moritella viscosa, Photobacterium damselae, Shewanella putrefaciens, Vibrio alginolyticus, Vibrio cholerae, Vibrio fischeri, Vibrio furnissii, Vibrio harveyi, Vibrio carchariae, Vibrio trachuri, Vibrio ichthyoenteri, Vibrio logei, Vibrio ordalii, Vibrio pelagius, Vibrio salmonicida, Vibrio splendidus, Halomonas cupida, Piscirickettsia salmonis, Vibrio shiloi, Vibrio coralliilyticus, Vibrio harveyi, Aurantimonas coralicida, Vibrio rotiferianus, Vibrio alginolyticus, Vibrio proteolyticus, Vibrio charcharvina, Serratia marcescens, Aquarickettsia rohweri

Eukaryotic Biodiversity

This sample contained DNA from 1105 different Eukaryotic sources.


This pie chart shows the diversity of each Eukaryotic Phylum detected in the sample. The size of each slice is proportional to the number of different types from each phylum. For clarity, only families containing 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Parasites

None of the DNA sequences from this sample matched known parasites.
Group Description Percent of eDNA
Amyloodinium Dinoflagellate parasites responsible for the fish disease Marine Velvet 0
Cryptocaryon Ciliate parasites responsible for the fish disease Ich 0
Brooklynella Ciliate parasites responsible for the fish disease Brook 0
Uronema Ciliate parasites responsible for a fish disease called by the same name 0
Phestilla Montipora-eating Nudibranchs 0
Amakusaplana Acropora-eating Flatworms 0
Ancyrocephalidae Flatworms often called Flukes that parasitize fish 0
Gyrodactylidae Flatworms often called Flukes that parasitize fish 0
Capsalidae Flatworms often called Flukes that parasitize fish 0
Turbonilla Snails in the family Pyramidellidae that parasitize giant clams 0
Trichodina A ciliated protozoan parasite of fish 0

Other Animal Pests

None of the DNA sequences from this sample matched known animal pests.
Group Description Percent of eDNA
Aiptasia The glass anemone, a ubiquitous pest 0
Thylacodes Vermetid snails 0
Asterina A group of sea stars that includes coral predators 0

Complete list of Eukaryotes identified

This list includes all Eukaryotes (Animals, Protists, and anything else besides Bacteria or Archaea) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Planomonas micra (Ancyromonadida), uncultured marine 507 (Ancyromonadida), Chitinopoma serrula (Annelida), Parapionosyllis elegans (Annelida), Zaus caeruleus (Arthropoda), Euterpina acutifrons (Arthropoda), Limnohalacarus cultellatus (Arthropoda), uncultured marine 607704 (Arthropoda), uncultured marine 607747 (Arthropoda), Curvularia kusanoi (Ascomycota), Ophiosphaerella herpotricha (Ascomycota), Humulus lupulus (Ascomycota), Fusarium oxysporum (Ascomycota), Nanoscypha tetraspora (Ascomycota), Taphrina deformans (Ascomycota), Aureobasidium pullulans (Ascomycota), uncultured eukaryote 6838 (Ascomycota), Ramularia grevilleana (Ascomycota), Capronia pilosella (Ascomycota), Acremonium chrysogenum (Ascomycota), Debaryomyces udenii (Ascomycota), uncultured fungus 607714 (Ascomycota), Filobasidium floriforme (Basidiomycota), Malassezia globosa (Basidiomycota), Malassezia restricta (Basidiomycota), Itersonilia pannonica (Basidiomycota), Sporobolomyces roseus (Basidiomycota), Fomitopsis pinicola (Basidiomycota), Wallemia sebi (Basidiomycota), uncultured fungus 509 (Basidiomycota), Cryptococcus sp. (Basidiomycota), Lacrymaria velutina (Basidiomycota), Leucoagaricus barssii (Basidiomycota), Tremella leptogii (Basidiomycota), Exidia uvapassa (Basidiomycota), uncultured fungus 599877 (Basidiomycota), Richoniella asterospora (Basidiomycota), Melanopsichium pennsylvanicum (Basidiomycota), Pseudobodo tremulans (Bicosoecida), Bicosoeca vacillans (Bicosoecida), uncultured picobiliphyte 631 (Bicosoecida), uncultured eukaryote 599017 (Cercozoa), Gymnophrys sp. (Cercozoa), marine metagenome (Cercozoa), uncultured eukaryote 353420 (Cercozoa), uncultured marine 15485 (Cercozoa), uncultured marine 497451 (Cercozoa), uncultured eukaryote 599499 (Cercozoa), Paradinium poucheti (Cercozoa), Protaspis sp. (Cercozoa), Lotharella oceanica (Cercozoa), Esquamula lacrimiformis (Cercozoa), uncultured eukaryote 601317 (Cercozoa), uncultured eukaryote 599794 (Cercozoa), uncultured marine 607642 (Cercozoa), uncultured marine 607738 (Cercozoa), uncultured Chytridiomycota 1636 (Chytridiomycota), uncultured eukaryote 607730 (Chytridiomycota), Miamiensis avidus (Ciliophora), uncultured ciliate 21826 (Ciliophora), Cyclidium plouneouri (Ciliophora), Apobryophyllum schmidingeri (Ciliophora), uncultured Eimeriidae 607729 (Ciliophora), uncultured archaeon 599492 (Crenarchaeota), uncultured archaeon 84646 (Crenarchaeota), Psammodictyon constrictum (Diatomea), uncultured eukaryote 52878 (Diatomea), Craticula pseudocitrus (Diatomea), uncultured eukaryote 198850 (Diatomea), uncultured marine 532023 (Diatomea), uncultured marine 593085 (Diatomea), Pseudogomphonema sp. (Diatomea), Rossia sp. (Diatomea), uncultured eukaryote 6222 (Diatomea), Navicula arenaria (Diatomea), Amphora coffeiformis (Diatomea), uncultured stramenopile 267345 (Diatomea), uncultured marine 599478 (Diatomea), uncultured marine 4997 (Diatomea), Halamphora subtropica (Diatomea), Cocconeis cf. (Diatomea), Haslea spicula (Diatomea), uncultured eukaryote 56 (Diatomea), uncultured marine 6226 (Diatomea), uncultured marine 186955 (Diatomea), Chaetoceros sp. (Diatomea), Rhaphoneis sp. (Diatomea), uncultured marine 152476 (Diatomea), uncultured marine 600138 (Diatomea), Bacillariophyta sp. (Diatomea), Nitzschia communis (Diatomea), Cymbella cistuliformis (Diatomea), Navicula sp. (Diatomea), uncultured eukaryote 206394 (Diatomea), uncultured eukaryote 248209 (Diatomea), Licmophora juergensii (Diatomea), uncultured eukaryote 604665 (Diatomea), Haslea ostrearia (Diatomea), Entomoneis sp. (Diatomea), uncultured marine 17602 (Diatomea), uncultured marine 60613 (Diatomea), Amphora sp. (Diatomea), uncultured marine 302602 (Diatomea), uncultured marine 404229 (Diatomea), uncultured marine 406296 (Diatomea), Nitzschia cf. (Diatomea), uncultured eukaryote 544124 (Diatomea), uncultured eukaryote 545382 (Diatomea), uncultured marine 601060 (Diatomea), uncultured marine 601302 (Diatomea), Nitzschia microcephala (Diatomea), Pseudostaurosira elliptica (Diatomea), uncultured eukaryote 607685 (Diatomea), uncultured marine 607687 (Diatomea), uncultured marine 607688 (Diatomea), uncultured stramenopile 607689 (Diatomea), Bysmatrum arenicola (Dinoflagellata), Heterocapsa triquetra (Dinoflagellata), Leiocephalium pseudosanguineum (Dinoflagellata), uncultured eukaryote 206667 (Dinoflagellata), Symbiodinium sp. (Dinoflagellata), uncultured eukaryote 422 (Dinoflagellata), uncultured eukaryote 206378 (Dinoflagellata), Paragymnodinium shiwhaense (Dinoflagellata), Coolia canariensis (Dinoflagellata), uncultured marine 607678 (Dinoflagellata), uncultured eukaryote 607748 (Dinoflagellata), Rhynchopus sp. (Euglenozoa), Diplonema sp. (Euglenozoa), Neobodo designis (Euglenozoa), Bodonidae sp. (Euglenozoa), uncultured eukaryote 561213 (Euglenozoa), uncultured euglenozoan 599660 (Euglenozoa), Rhynchobodo sp. (Euglenozoa), uncultured eukaryote 600187 (Euglenozoa), uncultured eukaryote 601019 (Euglenozoa), Diplonema ambulator (Euglenozoa), uncultured kinetoplastid 604713 (Euglenozoa), Paraphysomonas imperforata (Eukaryota), Akkesiphycus lubricum (Eukaryota), Paramoeba eilhardi (Eukaryota), Paramoeba branchiphila (Eukaryota), Gloeotilopsis planctonica (Eukaryota), Vannella sp. (Eukaryota), Chattonella subsalsa (Eukaryota), Graesiella emersonii (Eukaryota), Ciliophrys infusionum (Eukaryota), Platyamoeba sp. (Eukaryota), Paramoeba aestuarina (Eukaryota), Coccomyxa subellipsoidea (Eukaryota), Ulvophyceae sp. (Eukaryota), uncultured eukaryote 35940 (Eukaryota), Halothrix ambigua (Eukaryota), metagenome (Eukaryota), uncultured eukaryote 600147 (Eukaryota), uncultured Nannochloris 600262 (Eukaryota), Chlorella sp. (Eukaryota), Pirum gemmata (Eukaryota), Picochlorum eukaryotum (Eukaryota), uncultured Nannochloris 601360 (Eukaryota), Vermistella antarctica (Eukaryota), Stygamoeba regulata (Eukaryota), Cladophora socialis (Eukaryota), Monosiga brevicollis (Eukaryota), Ulvella repens (Eukaryota), Symbiochloris sp. (Eukaryota), uncultured eukaryote 599029 (Eukaryota), Coccoid pelagophyte (Eukaryota), Psammamonas australis (Eukaryota), uncultured eukaryote 604663 (Eukaryota), uncultured Corallinales 52775 (Florideophycidae), Hildenbrandia occidentalis (Florideophycidae), Lithophyllum pustulatum (Florideophycidae), Pirsonia verrucosa (Incertae_Sedis), uncultured eukaryote 599819 (Incertae_Sedis), Schizochytrium minutum (Labyrinthulomycetes), Oblongichytrium sp. (Labyrinthulomycetes), unidentified (Labyrinthulomycetes), uncultured stramenopile 21358 (Labyrinthulomycetes), Thraustochytriidae sp. (Labyrinthulomycetes), uncultured eukaryote 72 (Labyrinthulomycetes), Thraustochytrium pachydermum (Labyrinthulomycetes), Ulkenia profunda (Labyrinthulomycetes), Thraustochytrium multirudimentale (Labyrinthulomycetes), Stellarchytrium dubum (Labyrinthulomycetes), uncultured marine 1339 (Labyrinthulomycetes), Labyrinthuloides minuta (Labyrinthulomycetes), uncultured eukaryote 1958 (Labyrinthulomycetes), Aplanochytrium kerguelense (Labyrinthulomycetes), uncultured eukaryote 1117 (Labyrinthulomycetes), Thraustochytrium sp. (Labyrinthulomycetes), uncultured marine 295175 (Labyrinthulomycetes), uncultured eukaryote 4861 (Labyrinthulomycetes), uncultured eukaryote 2458 (Labyrinthulomycetes), uncultured eukaryote 269 (Labyrinthulomycetes), uncultured eukaryote 1886 (Labyrinthulomycetes), uncultured marine 2482 (Labyrinthulomycetes), uncultured marine 136747 (Labyrinthulomycetes), Botryochytrium sp. (Labyrinthulomycetes), uncultured eukaryote 4942 (Labyrinthulomycetes), uncultured eukaryote 600362 (Labyrinthulomycetes), uncultured eukaryote 604705 (Labyrinthulomycetes), uncultured eukaryote 1233 (Labyrinthulomycetes), uncultured eukaryote 2131 (Labyrinthulomycetes), Aplanochytrium blankum (Labyrinthulomycetes), uncultured eukaryote 66634 (Labyrinthulomycetes), uncultured eukaryote 602764 (Labyrinthulomycetes), uncultured eukaryote 607647 (Labyrinthulomycetes), uncultured eukaryote 1352 (MAST-3), Stephanopyxis turris (MAST-3), uncultured eukaryote 406 (MAST-3), metagenome (Peronosporomycetes), Myzocytiopsis osiris (Peronosporomycetes), Haliphthoros sp. (Peronosporomycetes), Atkinsiella dubia (Peronosporomycetes), Halodaphnea panulirata (Peronosporomycetes), Festuca arundinacea (Phragmoplastophyta), Gossypium hirsutum (Phragmoplastophyta), Leuconia nivea (Porifera), Pericharax heteroraphis (Porifera), Sycon capricorn (Porifera), Grantiopsis heroni (Porifera), Aphroceras sp. (Porifera)

Complete List of Microbes Identified

This list includes all microbes (Bacteria & Archae) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Unclassified Hyphomicrobiaceae 1489, Curtobacterium sp., Unclassified Piscirickettsiaceae 139944, Unclassified Bacteria 16462, Unclassified Bacteria 1800, Nitrosopumilus sp., Unclassified Bacteria 36004, Unclassified Bacteria 791, Inquilinus sp., Unclassified Bacteria 9721, Unclassified Hyphomicrobiaceae 3790, Unclassified Hyphomicrobiaceae 9813, Unclassified Bacteria 30, Unclassified Bacteria 14517, Unclassified Colwelliaceae 717, Unclassified Rhodobacteraceae 67807, Desulfococcus sp., Marinobacter sp., Unclassified Bacteria 99482, Unclassified NB1-i 409904, Unclassified Bacteria 409905, Unclassified Bacteria 949, Unclassified Bacteria 108920, Microbulbifer sp., Xenococcus sp., Unclassified Nitrospiraceae 10234, Vibrio sp., Unclassified Bacteria 421570, Alteromonas sp., Unclassified Flammeovirgaceae 88338, Unclassified Bacteria 109162, Unclassified Bacteria 12806, Bacillus sp., Unclassified Flavobacteriaceae 26959, Unclassified Bacteria 1173, Unclassified Hyphomicrobiaceae 4662, Aquimarina sp., Unclassified Hyphomicrobiaceae 273, Unclassified Bacteria 62060, Unclassified Oleiphilaceae 689, Unclassified Xenococcaceae 43854, Unclassified Bacteria 132680, Unclassified Bacteria 218805, Unclassified Bacteria 1889, Alcanivorax sp., Unclassified Bacillaceae 4656, Unclassified Bacteria 359, Staphylococcus aureus, Unclassified Simkaniaceae 797, Microbacterium chocolatum, Unclassified Bacteria 10172, Unclassified Pirellulaceae 28028, Unclassified Bacteria 111159, Pseudoalteromonas sp., Photobacterium sp., Hyphomonas sp., Unclassified Oceanospirillaceae 1096, Unclassified Bacteria 2152, Unclassified Bacteria 10830, Oceanicaulis sp., Marinomonas sp., Unclassified Bacteria 219179, Unclassified Oceanospirillaceae 13896, Unclassified Colwelliaceae 61827, Unclassified Micrococcaceae 154917, Unclassified Lachnospiraceae 220739, Unclassified Hyphomicrobiaceae 364160, Roseivirga sp., Unclassified Bacteria 410212, Unclassified Ulvophyceae 410213, Unclassified Bacteria 1488, Unclassified Flammeovirgaceae 19043, Bacteriovorax sp., Unclassified Bacteria 114522, Unclassified Bacteria 7226, Unclassified Flavobacteriaceae 12147, Unclassified Bacteria 107030, Unclassified Phycisphaeraceae 141887, Unclassified Oceanospirillaceae 265739, Unclassified Bacteria 422343, Unclassified Pirellulaceae 977, Unclassified Rhodospirillaceae 1237, Unclassified Nocardioidaceae 60322, Brachybacterium sp., Unclassified Colwelliaceae 104640, Unclassified Bacteria 129144, Kaistobacter sp., Unclassified Colwelliaceae 258941, Unclassified Rhodospirillaceae 1122, Unclassified Hyphomonadaceae 3755, Arcobacter sp., Unclassified Bacteria 69236, Clostridium sp., Glaciecola sp., Unclassified Flammeovirgaceae 410471, Unclassified OM60 422680, Unclassified HTCC2089 422681, Unclassified Bacteria 1141, Unclassified Colwelliaceae 26532, Brevibacillus reuszeri, Unclassified Syntrophobacteraceae 40595, Unclassified Pirellulaceae 109572, Unclassified Bacteria 189623, Unclassified OM60 422916, Amphritea sp., Unclassified Oceanospirillaceae 55820, Skermanella sp., Unclassified Hyphomicrobiaceae 273175, Unclassified NB1-i 410750, LCP-26 sp., Unclassified Pirellulaceae 423207, Unclassified Bacteria 423211, Corynebacterium sp., Unclassified Saprospiraceae 1751, Propionibacterium acnes, Unclassified Pirellulaceae 26821, Unclassified Xenococcaceae 196104, Unclassified mitochondria 210746, Unclassified Bacteria 257403, Unclassified Piscirickettsiaceae 410948, Unclassified mb2424 423619, Unclassified Pseudonocardiaceae 423622, Unclassified Bacteria 3210, Unclassified Francisellaceae 3793, Unclassified Bacteria 33862, Lactobacillus iners, BD2-13 sp., Unclassified Flavobacteriaceae 122467, KSA1 sp., Unclassified Bacteria 411255, Unclassified Bacteria 411256, Unclassified Bacteria 411263, Unclassified Bacteria 159, Unclassified Ellin6075 38218, Unclassified Desulfobulbaceae 411726, Unclassified Flammeovirgaceae 411733, Planctomyces sp., Unclassified Pseudonocardiaceae 424971, Unclassified Bacteria 424972, Acinetobacter johnsonii, Unclassified Ellin6075 424988, Unclassified Microbacteriaceae 424989, Pseudonocardia sp., Enhydrobacter sp., Unclassified Bacteria 60726, Unclassified Desulfobacteraceae 122784, Unclassified koll13 132726, Unclassified Bacteriovoracaceae 197623, Unclassified Chitinophagaceae 207423, Unclassified Bacteria 377134, Unclassified Bacteria 392831, Unclassified Pirellulaceae 412745, Unclassified Hyphomicrobiaceae 412757, Unclassified Flavobacteriaceae 412761, Unclassified Bacteria 412762, Unclassified Xenococcaceae 412763, Unclassified Xenococcaceae 412764, Unclassified Bacteria 412765, Unclassified Piscirickettsiaceae 412772, Unclassified Bacteria 412773, Unclassified Piscirickettsiaceae 412777, Unclassified Piscirickettsiaceae 412778, Unclassified Bacteria 412782, Unclassified Oleiphilaceae 426409, Unclassified Hyphomicrobiaceae 426411, Unclassified Bacteria 426412, Unclassified Bacteria 426415, Unclassified Oceanospirillaceae 426417, Unclassified HTCC2089 426420, Unclassified Bacteria 426421, Unclassified Rhodospirillaceae 426424, Unclassified Bacteria 220749, Unclassified Oleiphilaceae 259332, Unclassified Bacteria 267773, Unclassified Legionellaceae 270953, Unclassified Bacteria 272165, Unclassified Bacteria 325573, Unclassified Hyphomicrobiaceae 371001, Unclassified Pirellulaceae 414611, Unclassified Pirellulaceae 414622, Unclassified Pirellulaceae 414623, Unclassified Hyphomicrobiaceae 414624, Unclassified Hyphomicrobiaceae 414628, Unclassified Piscirickettsiaceae 414629, Unclassified Bacteria 414630, Unclassified Flavobacteriaceae 414632, Unclassified Bacteria 414633, Unclassified Xenococcaceae 414635, Unclassified Xenococcaceae 414636, Unclassified Hyphomicrobiaceae 414641, Unclassified NB1-i 414642, Unclassified Bacteria 414645, Unclassified Bacteria 414651, Unclassified Bacteria 414652, Unclassified Bacteria 414653, Unclassified Pirellulaceae 414654, Unclassified Hyphomicrobiaceae 414656, Unclassified Hyphomicrobiaceae 414657, Unclassified Bacteria 414658, Unclassified Bacteria 414659, Unclassified Piscirickettsiaceae 414660, Marinobacter bryozoorum, Unclassified Piscirickettsiaceae 414666, Unclassified Piscirickettsiaceae 414667, Unclassified Piscirickettsiaceae 414668, Unclassified Hyphomicrobiaceae 414679, Unclassified Syntrophobacteraceae 414680, Unclassified Hyphomicrobiaceae 414685, Unclassified Bacteria 414691, Unclassified Bacteria 429023, Unclassified Bacteria 429025, Unclassified Pirellulaceae 429028, Unclassified Colwelliaceae 429036, Unclassified Bacteria 429039, Unclassified Rhodobacteraceae 429040, Unclassified Bacteria 429041, Unclassified Bacteria 429043, Unclassified Bacteria 429044, Unclassified Oceanospirillaceae 429047, Unclassified Colwelliaceae 429049, Unclassified Colwelliaceae 429050, Unclassified Legionellaceae 429051, Unclassified Bacteria 429055, Unclassified OM60 429057


DNA analysis conducted by AquaBiomics LLC.

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Certificate of Analysis LRS G12.1

Certificate of Analysis: Live Reef Sand, Batch LRS G12.1

lrs.g12.1_Certificate_of_Analysis

    Certificate of Analysis



About this report

This report summarizes the results from DNA analysis of the community growing in a batch of Live Reef Sand. Universal genetic markers were amplified from microbial (prokaryotic) and other (eukaryotic) DNA in the sample, and thousands of individual DNA molecules from this mixture were sequenced. Each sequence was then compared with public DNA databases to identify its origin. This report summarizes the kinds of organisms detected in the sample, with a focus on beneficial microbes, pathogens, and parasites.

Information about this sample

Sample ID lrs.g12.1
Batch Name g04-17-2026
Sample Date 06/02/2026 10:00 AM

Microbial Diversity

This sample contained DNA from 543 different types of microbes.


This pie chart shows the diversity of each microbial family found in the sample. The size of each slice is proportional to the number of different types (labels on each slice). For clarity, only families with 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Nitrifying Community

Ammonia-Oxidizing Microbes

Cenarchaeaceae
Type Percent of Community Genus Species
2996 1.01 Nitrosopumilus Unknown
9677 0.52 Nitrosopumilus Unknown
73 0.32 Nitrosopumilus Unknown

Nitrite-Oxidizing Bacteria

Nitrospiraceae
Type Percent of Community Genus Species
410564 0.08 Unknown Unknown
410379 0.06 Nitrospira Unknown
The nitrifying community in this sample included 5 different types of microbes.

Bacterial Pathogens

None found.

Complete list of pathogens we screened for:

Eubacterium tarantellae, Lactococcus garvieae, Enterococcus seriolicida, Streptococcus parauberis, Streptococcus iniae, Mycobacterium chelonei, Mycobacterium fortuitum, Mycobacterium marinum, Mycobacterium neoaurum, Nocardia asteroides, Nocardia salmonicida, Nocardia seriolae, Renibacterium salmoninarum, Aeromonas jandaei, Aeromonas salmonicida, Serratia liquefaciens, Chryseobacterium balustinum, Chryseobacterium scophthalmum, Tenacibaculum maritimus, Tenacibaculum ovolyticus, Pasteurella skyensis, Pseudomonas anguilliseptica, Moritella marina, Moritella viscosa, Photobacterium damselae, Shewanella putrefaciens, Vibrio alginolyticus, Vibrio cholerae, Vibrio fischeri, Vibrio furnissii, Vibrio harveyi, Vibrio carchariae, Vibrio trachuri, Vibrio ichthyoenteri, Vibrio logei, Vibrio ordalii, Vibrio pelagius, Vibrio salmonicida, Vibrio splendidus, Halomonas cupida, Piscirickettsia salmonis, Vibrio shiloi, Vibrio coralliilyticus, Vibrio harveyi, Aurantimonas coralicida, Vibrio rotiferianus, Vibrio alginolyticus, Vibrio proteolyticus, Vibrio charcharvina, Serratia marscesens, Aquarickettsia rohweri

Eukaryotic Biodiversity

This sample contained DNA from 1956 different Eukaryotic sources.


This pie chart shows the diversity of each Eukaryotic Phylum detected in the sample. The size of each slice is proportional to the number of different types from each phylum. For clarity, only families with 3 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Parasites

None of the DNA sequences from this sample matched known parasites.
Group Description Percent of eDNA
Amyloodinium Dinoflagellate parasites responsible for the fish disease Marine Velvet 0
Cryptocaryon Ciliate parasites responsible for the fish disease Ich 0
Brooklynella Ciliate parasites responsible for the fish disease Brook 0
Uronema Ciliate parasites responsible for a fish disease called by the same name 0
Phestilla Montipora-eating Nudibranchs 0
Amakusaplana Acropora-eating Flatworms 0
Ancyrocephalidae Flatworms often called Flukes that parasitize fish 0
Gyrodactylidae Flatworms often called Flukes that parasitize fish 0
Capsalidae Flatworms often called Flukes that parasitize fish 0
Turbonilla Snails in the family Pyramidellidae that parasitize giant clams 0
Trichodina A ciliated protozoan parasite of fish 0

Other Animal Pests

None of the DNA sequences from this sample matched known animal pests.
Group Description Percent of eDNA
Aiptasia The glass anemone, a ubiquitous pest 0
Thylacodes Vermetid snails 0
Asterina A group of sea stars that includes coral predators 0

Complete list of Eukaryotes identified

This list includes all Eukaryotes (Animals, Protists, and anything else besides Bacteria or Archaea) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Gregarinidae sp. (Apicomplexa), Selenidium pygospionis (Apicomplexa), Foraminifera environmental (Apicomplexa), uncultured eukaryote 593586 (Apicomplexa), uncultured eukaryote 595413 (Apicomplexa), uncultured stramenopile 598296 (Apicomplexa), Amastigomonas bermudensis (Apusomonadidae), Multimonas koreensis (Apusomonadidae), Coquimba ishizakii (Arthropoda), Mormonilla sp. (Arthropoda), Leptocythere polymorpha (Arthropoda), Cobanocythere japonica (Arthropoda), Scaptognathus sp. (Arthropoda), uncultured marine 594442 (Arthropoda), uncultured eukaryote 594051 (Arthropoda), Zaus caeruleus (Arthropoda), uncultured eukaryote 595748 (Arthropoda), Rhombognathus levigatoides (Arthropoda), uncultured eukaryote 597657 (Arthropoda), Tigriopus californicus (Arthropoda), uncultured marine 597721 (Arthropoda), Paramphiascella fulvofasciata (Arthropoda), Ophiosphaerella herpotricha (Ascomycota), Humulus lupulus (Ascomycota), Curvularia kusanoi (Ascomycota), Parastagonospora nodorum (Ascomycota), Aspergillus cristatus (Ascomycota), Debaryomyces udenii (Ascomycota), Saccharomyces uvarum (Ascomycota), Cladosporium sp. (Ascomycota), Ascochyta phacae (Ascomycota), Rhodotorula sp. (Basidiomycota), uncultured fungus 509 (Basidiomycota), Xanthophyllomyces dendrorhous (Basidiomycota), Galerina marginata (Basidiomycota), Amylocorticium subsulphureum (Basidiomycota), Malassezia restricta (Basidiomycota), uncultured fungus 162660 (Basidiomycota), Anomoloma myceliosum (Basidiomycota), uncultured Dikarya 593548 (Basidiomycota), Anomoporia bombycina (Basidiomycota), Filobasidium floriforme (Basidiomycota), Trametes versicolor (Basidiomycota), metagenome (Centrohelida), uncultured eukaryote 595717 (Centrohelida), Paulinella chromatophora (Cercozoa), Cercozoa sp. (Cercozoa), uncultured eukaryote 593409 (Cercozoa), marine metagenome (Cercozoa), Thalassomyxa sp. (Cercozoa), uncultured Cercozoa 1180 (Cercozoa), uncultured eukaryote 593337 (Cercozoa), Reckertia gemma (Cercozoa), uncultured Cercozoa 593518 (Cercozoa), uncultured eukaryote 593563 (Cercozoa), uncultured eukaryote 593674 (Cercozoa), uncultured marine 60804 (Cercozoa), uncultured eukaryote 345331 (Cercozoa), metagenome (Cercozoa), Haplosporidian parasite (Cercozoa), uncultured eukaryote 207275 (Cercozoa), uncultured eukaryote 593355 (Cercozoa), uncultured marine 593496 (Cercozoa), uncultured eukaryote 593677 (Cercozoa), uncultured eukaryote 594686 (Cercozoa), Lotharella oceanica (Cercozoa), uncultured eukaryote 314937 (Cercozoa), uncultured eukaryote 593637 (Cercozoa), uncultured eukaryote 593731 (Cercozoa), uncultured eukaryote 593810 (Cercozoa), uncultured eukaryote 594426 (Cercozoa), Paradinium poucheti (Cercozoa), uncultured marine 597810 (Cercozoa), uncultured eukaryote 597814 (Cercozoa), Minorisa sp. (Cercozoa), uncultured eukaryote 536108 (Cercozoa), uncultured eukaryote 550315 (Cercozoa), uncultured eukaryote 594613 (Cercozoa), Esquamula lacrimiformis (Cercozoa), uncultured cercomonad 595773 (Cercozoa), uncultured marine 597022 (Cercozoa), uncultured marine 597308 (Cercozoa), uncultured marine 597743 (Cercozoa), uncultured marine 597800 (Cercozoa), uncultured marine 597801 (Cercozoa), uncultured eukaryote 597808 (Cercozoa), uncultured eukaryote 597809 (Cercozoa), Protaspis grandis (Cercozoa), uncultured marine 597818 (Cercozoa), uncultured cercomonad 597850 (Cercozoa), uncultured eukaryote 597854 (Cercozoa), Paradinium sp. (Cercozoa), uncultured marine 598091 (Cercozoa), uncultured Cercozoa 598098 (Cercozoa), uncultured Cercozoa 598099 (Cercozoa), uncultured eukaryote 598208 (Cercozoa), uncultured marine 598398 (Cercozoa), Paranophrys magna (Ciliophora), uncultured ciliate 3422 (Ciliophora), Thigmokeronopsis stoecki (Ciliophora), Epiclintes auricularis (Ciliophora), Protogastrostyla sterkii (Ciliophora), Vaginicola crystallina (Ciliophora), Pseudoamphisiella quadrinucleata (Ciliophora), Holosticha cf. (Ciliophora), Eutintinnus cf. (Ciliophora), Hemigastrostyla enigmatica (Ciliophora), Philasterides armatalis (Ciliophora), Lacrymaria marina (Ciliophora), Diophrys appendiculata (Ciliophora), Amphisiella sinica (Ciliophora), Holosticha diademata (Ciliophora), Protogastrostyla pulchra (Ciliophora), metagenome (Ciliophora), Apogastrostyla rigescens (Ciliophora), Spirotrachelostyla tani (Ciliophora), uncultured eukaryote 593280 (Ciliophora), Prodiscocephalus borrori (Ciliophora), Pleuronema sp. (Ciliophora), uncultured eukaryote 314695 (Ciliophora), Vorticella oceanica (Ciliophora), uncultured ciliate 199023 (Ciliophora), Protocruzia tuzeti (Ciliophora), uncultured ciliate 593644 (Ciliophora), Litonotus paracygnus (Ciliophora), Coeloperix sp. (Ciliophora), uncultured eukaryote 6217 (Ciliophora), Epicarchesium corlissi (Ciliophora), uncultured ciliate 199336 (Ciliophora), uncultured eukaryote 258679 (Ciliophora), Pseudovorticella paracratera (Ciliophora), uncultured Eimeriidae 594433 (Ciliophora), Kleinstyla dorsicirrata (Ciliophora), Holosticha bradburyae (Ciliophora), Leptoamphisiella vermis (Ciliophora), Apokeronopsis bergeri (Ciliophora), uncultured ciliate 595641 (Ciliophora), Holosticha heterofoissneri (Ciliophora), Loxophyllum utriculariae (Ciliophora), Folliculina WWS-2008 (Ciliophora), Stichotrichia sp. (Ciliophora), uncultured eukaryote 594873 (Ciliophora), uncultured Oxytrichidae 595695 (Ciliophora), Kiitricha marina (Ciliophora), uncultured ciliate 595709 (Ciliophora), Aspidisca aculeata (Ciliophora), Cinetochilum ovale (Ciliophora), uncultured ciliate 597481 (Ciliophora), uncultured ciliate 597495 (Ciliophora), uncultured ciliate 598267 (Ciliophora), Uronychia transfuga (Ciliophora), uncultured eukaryote 5040 (Ciliophora), Euplotes sp. (Ciliophora), uncultured Eimeriidae 594435 (Ciliophora), Aspidisca fusca (Ciliophora), uncultured eukaryote 595645 (Ciliophora), Parauronema longum (Ciliophora), uncultured ciliate 595705 (Ciliophora), uncultured ciliate 597270 (Ciliophora), Synophrya sp. (Ciliophora), Entorhipidium tenue (Ciliophora), uncultured ciliate 597273 (Ciliophora), Oxytricha sp. (Ciliophora), Diophrys parappendiculata (Ciliophora), Pseudokahliella marina (Ciliophora), uncultured ciliate 597501 (Ciliophora), Apokeronopsis ovalis (Ciliophora), uncultured marine 598134 (Ciliophora), uncultured ciliate 598213 (Ciliophora), Metaurostylopsis cheni (Ciliophora), uncultured Chytridiomycota 593088 (Cryptomycota), uncultured Chytridiomycota 594170 (Cryptomycota), uncultured fungus 593979 (Cryptomycota), uncultured eukaryote 417166 (Cryptomycota), uncultured eukaryote 6222 (Diatomea), Psammodictyon constrictum (Diatomea), uncultured eukaryote 402670 (Diatomea), Bacillariophyta sp. (Diatomea), Amphora sp. (Diatomea), Caloneis sp. (Diatomea), Navicula arenaria (Diatomea), Sellaphora sp. (Diatomea), Navicula vara (Diatomea), Pseudogomphonema sp. (Diatomea), Cylindrotheca fusiformis (Diatomea), Haslea spicula (Diatomea), uncultured eukaryote 402714 (Diatomea), Thalassiosira hendeyi (Diatomea), Rhaphoneis sp. (Diatomea), uncultured eukaryote 592956 (Diatomea), uncultured marine 592987 (Diatomea), Sellaphora cf. (Diatomea), uncultured eukaryote 198850 (Diatomea), uncultured eukaryote 325512 (Diatomea), Chaetoceros sp. (Diatomea), uncultured eukaryote 592960 (Diatomea), Rossia sp. (Diatomea), Navicula sp. (Diatomea), uncultured marine 593085 (Diatomea), uncultured marine 593149 (Diatomea), uncultured stramenopile 152522 (Diatomea), Haslea ostrearia (Diatomea), uncultured stramenopile 142135 (Diatomea), Tryblionella apiculata (Diatomea), uncultured eukaryote 593281 (Diatomea), Eolimna minima (Diatomea), Craticula pseudocitrus (Diatomea), uncultured stramenopile 403231 (Diatomea), uncultured stramenopile 593643 (Diatomea), uncultured marine 60613 (Diatomea), Pleurosigma sp. (Diatomea), Craticula molestiformis (Diatomea), Diploneis cf. (Diatomea), Hippodonta capitata (Diatomea), uncultured stramenopile 593629 (Diatomea), uncultured eukaryote 593641 (Diatomea), Nitzschia longissima (Diatomea), uncultured marine 593843 (Diatomea), uncultured marine 593849 (Diatomea), uncultured eukaryote 56 (Diatomea), Nitzschia cf. (Diatomea), uncultured marine 593554 (Diatomea), uncultured marine 594167 (Diatomea), uncultured marine 594847 (Diatomea), uncultured marine 186955 (Diatomea), uncultured marine 406296 (Diatomea), Navicula veneta (Diatomea), uncultured marine 593439 (Diatomea), Peridinium balticum (Diatomea), uncultured marine 593976 (Diatomea), uncultured eukaryote 594151 (Diatomea), uncultured marine 594434 (Diatomea), Papiliocellulus elegans (Diatomea), uncultured marine 595727 (Diatomea), uncultured eukaryote 61244 (Diatomea), uncultured marine 141668 (Diatomea), uncultured marine 594126 (Diatomea), uncultured eukaryote 594128 (Diatomea), Pinnularia sp. (Diatomea), uncultured marine 594166 (Diatomea), Amphora cf. (Diatomea), uncultured stramenopile 594175 (Diatomea), uncultured marine 594340 (Diatomea), uncultured marine 594407 (Diatomea), uncultured marine 594861 (Diatomea), Amphora marina (Diatomea), uncultured marine 2320 (Diatomea), uncultured marine 6226 (Diatomea), uncultured eukaryote 160064 (Diatomea), uncultured marine 261457 (Diatomea), Cocconeis stauroneiformis (Diatomea), Navicula diserta (Diatomea), uncultured stramenopile 487576 (Diatomea), uncultured marine 510447 (Diatomea), uncultured marine 536080 (Diatomea), Cymatosira belgica (Diatomea), Skeletonema tropicum (Diatomea), uncultured eukaryote 594756 (Diatomea), Eunotia sp. (Diatomea), Sellaphora pupula (Diatomea), uncultured marine 594879 (Diatomea), uncultured marine 595663 (Diatomea), uncultured marine 595669 (Diatomea), uncultured marine 595673 (Diatomea), uncultured eukaryote 595682 (Diatomea), uncultured marine 595684 (Diatomea), uncultured marine 595685 (Diatomea), uncultured marine 595721 (Diatomea), uncultured eukaryote 595736 (Diatomea), uncultured marine 595807 (Diatomea), Nitzschia microcephala (Diatomea), uncultured eukaryote 595899 (Diatomea), Bacillaria paxillifer (Diatomea), uncultured marine 597283 (Diatomea), uncultured marine 597292 (Diatomea), Mayamaea atomus (Diatomea), uncultured marine 597307 (Diatomea), uncultured eukaryote 597327 (Diatomea), uncultured marine 597369 (Diatomea), uncultured stramenopile 597377 (Diatomea), uncultured stramenopile 597391 (Diatomea), uncultured eukaryote 597496 (Diatomea), uncultured stramenopile 597592 (Diatomea), uncultured eukaryote 597696 (Diatomea), uncultured marine 597919 (Diatomea), uncultured stramenopile 597935 (Diatomea), uncultured eukaryote 597951 (Diatomea), Nitzschia filiformis (Diatomea), uncultured marine 597996 (Diatomea), Entomoneis sp. (Diatomea), uncultured stramenopile 598016 (Diatomea), Phaeodactylum tricornutum (Diatomea), Sellaphora capitata (Diatomea), uncultured marine 58 (Diatomea), uncultured marine 1091 (Diatomea), uncultured marine 1113 (Diatomea), Nitzschia sigma (Diatomea), uncultured eukaryote 141758 (Diatomea), Fragilaria capucina (Diatomea), uncultured eukaryote 267631 (Diatomea), uncultured eukaryote 308685 (Diatomea), uncultured stramenopile 314534 (Diatomea), uncultured stramenopile 326526 (Diatomea), uncultured stramenopile 345420 (Diatomea), uncultured marine 350976 (Diatomea), uncultured eukaryote 352063 (Diatomea), uncultured eukaryote 403853 (Diatomea), uncultured eukaryote 447300 (Diatomea), uncultured eukaryote 510836 (Diatomea), uncultured eukaryote 550438 (Diatomea), uncultured marine 592868 (Diatomea), uncultured eukaryote 594831 (Diatomea), uncultured Naviculales 594860 (Diatomea), uncultured eukaryote 595655 (Diatomea), uncultured marine 595657 (Diatomea), uncultured marine 595665 (Diatomea), uncultured marine 595667 (Diatomea), uncultured marine 595668 (Diatomea), uncultured eukaryote 595671 (Diatomea), uncultured stramenopile 595677 (Diatomea), Navicula salinicola (Diatomea), uncultured eukaryote 595731 (Diatomea), uncultured marine 595776 (Diatomea), uncultured marine 595777 (Diatomea), uncultured eukaryote 595800 (Diatomea), uncultured marine 595829 (Diatomea), Fallacia sp. (Diatomea), uncultured marine 596989 (Diatomea), uncultured stramenopile 597010 (Diatomea), uncultured stramenopile 597228 (Diatomea), uncultured stramenopile 597229 (Diatomea), uncultured stramenopile 597230 (Diatomea), uncultured marine 597295 (Diatomea), Thalassionema frauenfeldii (Diatomea), Coscinodiscus radiatus (Diatomea), uncultured marine 597303 (Diatomea), Nitzschia sp. (Diatomea), Cylindrotheca sp. (Diatomea), uncultured eukaryote 597328 (Diatomea), uncultured eukaryote 597333 (Diatomea), uncultured eukaryote 597341 (Diatomea), Navicula reinhardtii (Diatomea), uncultured eukaryote 597346 (Diatomea), uncultured eukaryote 597351 (Diatomea), uncultured eukaryote 597352 (Diatomea), uncultured marine 597367 (Diatomea), uncultured eukaryote 597370 (Diatomea), uncultured eukaryote 597385 (Diatomea), uncultured stramenopile 597386 (Diatomea), uncultured eukaryote 597387 (Diatomea), uncultured eukaryote 597404 (Diatomea), Psammodictyon panduriforme (Diatomea), Thalassiosira mala (Diatomea), uncultured eukaryote 597468 (Diatomea), uncultured eukaryote 597484 (Diatomea), uncultured marine 597589 (Diatomea), uncultured eukaryote 597670 (Diatomea), uncultured eukaryote 597704 (Diatomea), uncultured marine 597742 (Diatomea), uncultured eukaryote 597827 (Diatomea), Licmophora juergensii (Diatomea), Tursiocola cf. (Diatomea), uncultured marine 597994 (Diatomea), uncultured stramenopile 598004 (Diatomea), Surirella brebissonii (Diatomea), uncultured stramenopile 598012 (Diatomea), Cocconeis placentula (Diatomea), uncultured marine 598022 (Diatomea), Pauliella sp. (Diatomea), uncultured eukaryote 598083 (Diatomea), uncultured eukaryote 598092 (Diatomea), uncultured eukaryote 598197 (Diatomea), uncultured marine 598297 (Diatomea), Pseudo-nitzschia heimii (Diatomea), uncultured marine 598387 (Diatomea), Navicula brockmannii (Diatomea), uncultured eukaryote 598476 (Diatomea), Prorocentrum micans (Dinoflagellata), Amphidinium steinii (Dinoflagellata), Pentapharsodinium tyrrhenicum (Dinoflagellata), Amphidinium sp. (Dinoflagellata), Dinophyceae sp. (Dinoflagellata), Heterocapsa triquetra (Dinoflagellata), Amphidinium cupulatisquama (Dinoflagellata), uncultured marine 402677 (Dinoflagellata), uncultured marine 402759 (Dinoflagellata), Ostreopsis cf. (Dinoflagellata), uncultured eukaryote 8 (Dinoflagellata), Symbiodinium sp. (Dinoflagellata), uncultured eukaryote 595884 (Dinoflagellata), Bysmatrum arenicola (Dinoflagellata), uncultured dinoflagellate 595892 (Dinoflagellata), uncultured eukaryote 32433 (Dinoflagellata), uncultured eukaryote 159245 (Dinoflagellata), uncultured marine 233089 (Dinoflagellata), Durinskia agilis (Dinoflagellata), uncultured eukaryote 595876 (Dinoflagellata), Symbiodinium microadriaticum (Dinoflagellata), Prorocentrum concavum (Dinoflagellata), Dinophyta sp. (Dinoflagellata), Pfiesteria-like sp. (Dinoflagellata), uncultured eukaryote 480655 (Dinoflagellata), uncultured eukaryote 554599 (Dinoflagellata), uncultured eukaryote 593783 (Dinoflagellata), Blastodinium pruvoti (Dinoflagellata), uncultured dinoflagellate 595718 (Dinoflagellata), uncultured eukaryote 595879 (Dinoflagellata), uncultured eukaryote 595881 (Dinoflagellata), uncultured eukaryote 597552 (Dinoflagellata), uncultured eukaryote 597690 (Dinoflagellata), uncultured eukaryote 597753 (Dinoflagellata), Amphidoma languida (Dinoflagellata), Symbiodinium minutum (Dinoflagellata), uncultured eukaryote 598315 (Dinoflagellata), uncultured eukaryote 598319 (Dinoflagellata), uncultured marine 598322 (Dinoflagellata), uncultured marine 598324 (Dinoflagellata), uncultured eukaryote 598325 (Dinoflagellata), metagenome (Dinoflagellata), Stoeckeria sp. (Dinoflagellata), cryptoperidiniopsoid sp. (Dinoflagellata), Cryptoperidiniopsis brodyi (Dinoflagellata), uncultured marine 598361 (Dinoflagellata), Notosolenus urceolatus (Euglenozoa), Neobodo designis (Euglenozoa), Bodonidae sp. (Euglenozoa), Diplonemida sp. (Euglenozoa), uncultured eukaryote 263997 (Euglenozoa), Rhynchomonas sp. (Euglenozoa), uncultured kinetoplastid 13113 (Euglenozoa), Hemistasiidae sp. (Euglenozoa), Diplonema sp. (Euglenozoa), Diplonema ambulator (Euglenozoa), Rhynchopus sp. (Euglenozoa), Perkinsela sp. (Euglenozoa), uncultured eukaryote 594890 (Euglenozoa), Symbiochloris sp. (Eukaryota), Ulvophyceae sp. (Eukaryota), Paraphysomonas imperforata (Eukaryota), Phaeophila dendroides (Eukaryota), uncultured eukaryote 35940 (Eukaryota), Paramoeba pemaquidensis (Eukaryota), metagenome (Eukaryota), Halothrix ambigua (Eukaryota), Ulvella repens (Eukaryota), Pirum gemmata (Eukaryota), uncultured Apatococcus 153001 (Eukaryota), Hazenia basiliensis (Eukaryota), uncultured marine 561139 (Eukaryota), Parvamoeba rugata (Eukaryota), Salpingoeca urceolata (Eukaryota), uncultured eukaryote 594264 (Eukaryota), Desmochloris halophila (Eukaryota), Vermistella antarctica (Eukaryota), Picochlorum maculatum (Eukaryota), Paramoeba branchiphila (Eukaryota), Mantamonas plastica (Eukaryota), uncultured eukaryote 593630 (Eukaryota), Pycnococcus sp. (Eukaryota), uncultured eukaryote 594754 (Eukaryota), Sarcinochrysis marina (Eukaryota), Ruthnielsenia tenuis (Eukaryota), Scytosiphon lomentaria (Eukaryota), uncultured eukaryote 597869 (Eukaryota), prasinophyte sp. (Eukaryota), uncultured Nannochloris 598331 (Eukaryota), Lychaete pellucidoidea (Eukaryota), Tetraselmis marina (Eukaryota), Goniomonas sp. (Eukaryota), uncultured marine 5078 (Eukaryota), uncultured Dunaliellaceae 407200 (Eukaryota), Chrysophyceae sp. (Eukaryota), uncultured eukaryote 550086 (Eukaryota), uncultured stramenopile 550791 (Eukaryota), Prasinoderma coloniale (Eukaryota), uncultured eukaryote 592940 (Eukaryota), uncultured Ostreococcus 593138 (Eukaryota), Platyamoeba contorta (Eukaryota), uncultured eukaryote 594685 (Eukaryota), Lessonia variegata (Eukaryota), Dermocystidium sp. (Eukaryota), uncultured stramenopile 595764 (Eukaryota), uncultured eukaryote 597278 (Eukaryota), uncultured eukaryote 597281 (Eukaryota), Cladophora opaca (Eukaryota), Tetraselmis sp. (Eukaryota), Carteria crucifera (Eukaryota), uncultured eukaryote 598054 (Eukaryota), uncultured eukaryote 598070 (Eukaryota), Pseudulvella consociata (Eukaryota), uncultured Nannochloris 598219 (Eukaryota), uncultured Nannochloris 598327 (Eukaryota), uncultured eukaryote 598456 (Eukaryota), Peyssonnelia novae-hollandiae (Florideophycidae), Peyssonnelia sp. (Florideophycidae), Antithamnion aglandum (Florideophycidae), Hildenbrandia rubra (Florideophycidae), Pirsonia guinardiae (Incertae_Sedis), Pirsonia verrucosa (Incertae_Sedis), Developayella elegans (Incertae_Sedis), Roombia truncata (Kathablepharidae), uncultured marine 207873 (Kathablepharidae), Katablepharis remigera (Kathablepharidae), uncultured marine 1339 (Labyrinthulomycetes), unidentified (Labyrinthulomycetes), uncultured eukaryote 593069 (Labyrinthulomycetes), Oblongichytrium sp. (Labyrinthulomycetes), uncultured eukaryote 269 (Labyrinthulomycetes), Thraustochytriidae sp. (Labyrinthulomycetes), Thraustochytrium pachydermum (Labyrinthulomycetes), Ulkenia profunda (Labyrinthulomycetes), uncultured stramenopile 21358 (Labyrinthulomycetes), uncultured marine 2482 (Labyrinthulomycetes), Aplanochytrium stocchinoi (Labyrinthulomycetes), Labyrinthula sp. (Labyrinthulomycetes), Labyrinthuloides minuta (Labyrinthulomycetes), Stellarchytrium dubum (Labyrinthulomycetes), Thraustochytrium multirudimentale (Labyrinthulomycetes), Aplanochytrium kerguelense (Labyrinthulomycetes), uncultured eukaryote 72 (Labyrinthulomycetes), uncultured labyrinthulid 594363 (Labyrinthulomycetes), uncultured eukaryote 4861 (Labyrinthulomycetes), uncultured eukaryote 314880 (Labyrinthulomycetes), uncultured eukaryote 594834 (Labyrinthulomycetes), uncultured eukaryote 594858 (Labyrinthulomycetes), Thraustochytrium sp. (Labyrinthulomycetes), uncultured marine 593004 (Labyrinthulomycetes), uncultured labyrinthulid 594130 (Labyrinthulomycetes), uncultured eukaryote 595744 (Labyrinthulomycetes), uncultured eukaryote 595747 (Labyrinthulomycetes), uncultured eukaryote 597875 (Labyrinthulomycetes), uncultured eukaryote 1958 (Labyrinthulomycetes), uncultured eukaryote 2623 (Labyrinthulomycetes), uncultured eukaryote 71955 (Labyrinthulomycetes), uncultured eukaryote 353710 (Labyrinthulomycetes), uncultured eukaryote 593130 (Labyrinthulomycetes), uncultured eukaryote 593675 (Labyrinthulomycetes), uncultured marine 594050 (Labyrinthulomycetes), uncultured eukaryote 595400 (Labyrinthulomycetes), uncultured eukaryote 595784 (Labyrinthulomycetes), uncultured marine 597028 (Labyrinthulomycetes), uncultured eukaryote 597405 (Labyrinthulomycetes), uncultured eukaryote 597693 (Labyrinthulomycetes), uncultured eukaryote 597695 (Labyrinthulomycetes), Aplanochytrium blankum (Labyrinthulomycetes), uncultured marine 597705 (Labyrinthulomycetes), uncultured eukaryote 597706 (Labyrinthulomycetes), uncultured marine 597707 (Labyrinthulomycetes), uncultured labyrinthulid 597925 (Labyrinthulomycetes), uncultured eukaryote 406 (MAST-3), uncultured eukaryote 1352 (MAST-3), uncultured eukaryote 597797 (MAST-3), Chromadorita leuckarti (Nematozoa), Paracanthonchus caecus (Nematozoa), Syringolaimus sp. (Nematozoa), Halomonhystera sp. (Nematozoa), Monhysteridae environmental (Nematozoa), uncultured eukaryote 593974 (Nematozoa), Oscheius tipulae (Nematozoa), uncultured eukaryote 593876 (Nematozoa), uncultured eukaryote 597216 (Nematozoa), Haliphthoros sp. (Peronosporomycetes), metagenome (Peronosporomycetes), uncultured stramenopile 594857 (Peronosporomycetes), Halodaphnea panulirata (Peronosporomycetes), uncultured stramenopile 598123 (Peronosporomycetes), Quercus lobata (Phragmoplastophyta), Eutrema salsugineum (Phragmoplastophyta), Nothapodytes nimmoniana (Phragmoplastophyta), Oropetium thomaeum (Phragmoplastophyta), Atrichum undulatum (Phragmoplastophyta), Cinachyrella sp. (Porifera), Grantiopsis heroni (Porifera), Leuconia nivea (Porifera), Ernstia adusta (Porifera), uncultured marine 593011 (Protalveolata), uncultured marine 268951 (Protalveolata), Voromonas pontica (Protalveolata), uncultured eukaryote 597325 (Protalveolata), uncultured eukaryote 598370 (Protalveolata), uncultured eukaryote 597331 (Protalveolata), uncultured eukaryote 597764 (Protalveolata), uncultured eukaryote 597883 (Protalveolata), uncultured eukaryote 597963 (Protalveolata), uncultured eukaryote 598195 (Protalveolata), uncultured eukaryote 598246 (Protalveolata), uncultured eukaryote 595833 (SA1-3C06), Hemiarma marina (SA1-3C06), uncultured eukaryote 597890 (SA1-3C06), uncultured eukaryote 593065 (uncultured), Chromerida sp. (uncultured), uncultured eukaryote 1004 (uncultured), uncultured eukaryote 293 (uncultured), uncultured eukaryote 525441 (uncultured), uncultured eukaryote 597751 (uncultured), uncultured eukaryote 598330 (uncultured), uncultured eukaryote 598353 (uncultured)

Complete List of Microbes Identified

This list includes all microbes (Bacteria & Archae) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Vibrio sp., Unclassified Bacteria 27069, Unclassified Hyphomicrobiaceae 1489, Unclassified Bacteria 99471, Unclassified Bacteria 253087, Unclassified Bacteria 1800, Unclassified Bacteria 9721, Unclassified Piscirickettsiaceae 334, Unclassified Bacteria 791, Unclassified Bacteria 14517, Nitrosopumilus sp., Unclassified Bacteria 68430, Unclassified Coxiellaceae 34855, Unclassified Bacteria 81476, Microbulbifer sp., Unclassified Bacteria 253202, Unclassified Bacteria 195182, Unclassified Coxiellaceae 2257, Unclassified Bacteria 81096, Unclassified Bacteria 106776, Photobacterium sp., Unclassified Bacteria 10241, Unclassified Bacteria 74194, Unclassified Bacteria 25504, Clostridium sp., Unclassified Bacteria 10206, Unclassified Bacteria 99482, Unclassified Bacteria 2094, Unclassified Bacteria 11399, Unclassified Clostridiaceae 1377, Unclassified Legionellaceae 409922, Unclassified Pirellulaceae 14949, Unclassified Bacteria 65779, Unclassified Bacteria 220666, Unclassified Bacteria 12277, Desulfococcus sp., Unclassified Bacteria 171772, Unclassified Bacteria 26049, Mycobacterium sp., Unclassified Pirellulaceae 109572, Unclassified Pirellulaceae 409960, Unclassified Bacteria 3834, Rothia mucilaginosa, Tepidibacter sp., Unclassified Hyphomicrobiaceae 3790, Unclassified Bacteria 108985, Unclassified Lachnospiraceae 220739, Unclassified Bacteria 265604, Unclassified Pirellulaceae 409980, Unclassified Hyphomicrobiaceae 9813, Unclassified Pirellulaceae 193130, Methylobacterium adhaesivum, Synechococcus sp., Unclassified Bacteria 209344, Curtobacterium sp., Unclassified Bacteria 1889, Unclassified Bacteria 46553, Unclassified Bacteria 112750, Unclassified Bacteria 189457, Unclassified Bacteria 410061, Unclassified Bacteria 551, Unclassified Hyphomicrobiaceae 14112, Unclassified koll13 61095, Unclassified Bacteria 224962, Unclassified Bacteria 336207, Unclassified Bacteria 410077, Unclassified Bacteria 99527, Unclassified Bacteria 189788, Unclassified Bacteria 200645, Unclassified Hyphomicrobiaceae 27524, Unclassified Bacteria 68084, Loktanella vestfoldensis, Unclassified Bacteria 409867, Unclassified Clostridiaceae 5601, Unclassified Hyphomicrobiaceae 9843, Unclassified Bacteria 10868, Unclassified Legionellaceae 107339, Amphritea sp., Tepidimonas sp., Unclassified Criblamydiaceae 188976, Unclassified Nocardioidaceae 228354, Unclassified Peptostreptococcaceae 253101, Unclassified Hyphomicrobiaceae 410155, Paulinella sp., Unclassified Bacteria 949, Propionibacterium acnes, Paracoccus marcusii, Arcobacter sp., Unclassified Pirellulaceae 140611, Xenococcus sp., Unclassified Pirellulaceae 244906, Unclassified Hyphomicrobiaceae 410185, Unclassified Cyanobacteriaceae 410190, Marivita sp., Unclassified Saprospiraceae 69158, Clostridium perfringens, A17 sp., Unclassified Bacteria 37826, SC3-56 sp., Unclassified Cohaesibacteraceae 410256, Unclassified Bacteria 410257, Unclassified Piscirickettsiaceae 410258, Unclassified Hyphomicrobiaceae 410261, Propionigenium sp., Unclassified Rhodospirillaceae 116820, Unclassified Xanthomonadaceae 2375, Neisseria sp., Acinetobacter rhizosphaerae, Unclassified koll13 93630, Mesorhizobium sp., Unclassified Colwelliaceae 717, Unclassified Bacteria 133097, Unclassified Lachnospiraceae 363947, Unclassified Flavobacteriaceae 410456, Unclassified Bacteria 410464, Cobetia sp., Unclassified Saprospiraceae 64146, Unclassified Flavobacteriaceae 69773, Unclassified Bacteria 88113, Unclassified Bacteria 149752, Unclassified Nitrospiraceae 410564, Unclassified Pirellulaceae 410579, Unclassified Erythrobacteraceae 410580, Unclassified JTB38 410581, Unclassified Bacillaceae 4656, Unclassified Bacteria 54750, Unclassified Piscirickettsiaceae 178417, Unclassified Methylophilaceae 209263, Unclassified Bacillaceae 266399, Unclassified Bacteria 290657, Unclassified Criblamydiaceae 309185, Unclassified Pirellulaceae 410718, Unclassified Cohaesibacteraceae 410719, Unclassified Rhodospirillaceae 410720, Unclassified Bacteria 410734, Unclassified Acetobacteraceae 410737, Candidatus sp., Crocinitomix sp., Achromobacter sp., Epulopiscium sp., Unclassified Bacteria 230702, Unclassified Bacteria 253493, Unclassified Bacteria 320370, Nitrospira sp., Unclassified Rhodospirillaceae 410928, Unclassified Rhodospirillaceae 410929, Cyanobacterium sp., Unclassified Bacteria 410935, Unclassified Chitinophagaceae 410937, Ferrimonas sp., Microbulbifer elongatus, Unclassified Bacteria 36756, Unclassified Desulfovibrionaceae 40026, Unclassified Flammeovirgaceae 173258, Unclassified koll13 245442, Unclassified Peptostreptococcaceae 369218, Unclassified CV106 411200, Unclassified Bacteria 411202, Unclassified Piscirickettsiaceae 411203, Unclassified Bacteria 411204, Unclassified Bacteria 411241, Unclassified mitochondria 4445, Unclassified Bacteria 13895, Cloacibacterium sp., Unclassified Bacteria 215992, Unclassified Bacteria 218829, Unclassified Bacteria 377467, Unclassified Cohaesibacteraceae 411646, Unclassified Bacteria 411647, Unclassified Bacteria 411695, Unclassified Pirellulaceae 411698, Pseudomonas sp., Unclassified Bacteria 411701, Unclassified Flammeovirgaceae 411704, Rudanella sp., Unclassified Hyphomonadaceae 290, Planctomyces sp., Brachybacterium sp., Unclassified Archaea 412532, Unclassified Phycisphaeraceae 412533, Unclassified Bacteria 412534, Unclassified Cohaesibacteraceae 412546, Unclassified Bacteria 412553, Unclassified Pirellulaceae 412666, Unclassified Bacteria 412678, Unclassified Bacteria 412680, Unclassified Coxiellaceae 412688, Unclassified Chitinophagaceae 412701, Actinomyces sp., Unclassified koll13 412710, Unclassified Gaiellaceae 412713, Veillonella dispar, Unclassified Hyphomicrobiaceae 412724, Unclassified Piscirickettsiaceae 9883, Unclassified Hyphomicrobiaceae 165088, Unclassified Clostridiaceae 183449, Unclassified Hyphomicrobiaceae 298959, Unclassified Bacillaceae 383338, Unclassified Bacteria 414287, Unclassified Bacteria 414289, Unclassified Piscirickettsiaceae 414297, Unclassified Piscirickettsiaceae 414298, Unclassified Bacteria 414299, Unclassified Bacteria 414303, Unclassified Cohaesibacteraceae 414304, Unclassified Rhodospirillaceae 414305, Unclassified Piscirickettsiaceae 414308, Unclassified Piscirickettsiaceae 414309, Unclassified Piscirickettsiaceae 414313, Unclassified koll13 414316, Unclassified Pirellulaceae 414496, Unclassified Pirellulaceae 414497, Unclassified Pirellulaceae 414498, Unclassified Pirellulaceae 414499, Unclassified Bacteria 414500, Unclassified Rhodospirillaceae 414502, Unclassified Bacteria 414505, Unclassified Hyphomicrobiaceae 414507, Unclassified Rhodospirillaceae 414508, Unclassified Bacteria 414509, Unclassified Bacteria 414511, Unclassified Hyphomicrobiaceae 414516, Unclassified Rhodobacteraceae 414518, Octadecabacter sp., Unclassified Bacteria 414520, Unclassified Criblamydiaceae 414524, Unclassified Hyphomicrobiaceae 414529, Unclassified JTB38 414530, Unclassified Coxiellaceae 414531, Unclassified Legionellaceae 414539, Unclassified Lachnospiraceae 414543, Unclassified Lachnospiraceae 414544, Unclassified Lachnospiraceae 414545


DNA analysis conducted by AquaBiomics LLC.

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Certificate of Analysis LRR G11.31

Certificate of Analysis: Live Reef Rubble, Batch LRR G11.31

lrr.g11.31_Certificate_of_Analysis

    Certificate of Analysis



About this report

This report summarizes the results from DNA analysis of the community growing in and on a batch of Live Reef Rubble. Universal genetic markers were amplified from microbial (prokaryotic) and other (eukaryotic) DNA in the sample, and thousands of individual DNA molecules from this mixture were sequenced. Each sequence was then compared with public DNA databases to identify its origin. This report summarizes the kinds of organisms detected in the sample, with a focus on beneficial microbes, pathogens, and parasites.

Information about this sample

Sample ID lrr.g11.31
Batch Name g12-15-25
Sample Date 03/20/2026 10:30 AM

Microbial Diversity

This sample contained DNA from 653 different types of microbes.


This pie chart shows the diversity of each microbial family found in the sample. The size of each slice is proportional to the number of different types (labels on each slice). For clarity, only families containing 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Nitrifying Community

Ammonia-Oxidizing Microbes

Nitrosomonadaceae
Type Percent of Community Genus Species
2503 0.06 Unknown Unknown
Nitrososphaeraceae
Type Percent of Community Genus Species
4288 0.04 Candidatus Unknown
Cenarchaeaceae
Type Percent of Community Genus Species
73 0.64 Nitrosopumilus Unknown
9677 0.40 Nitrosopumilus Unknown
390997 0.35 Nitrosopumilus Unknown
3535 0.26 Cenarchaeum symbiosum
31722 0.20 Unknown Unknown
393806 0.02 Unknown Unknown
395261 0.01 Cenarchaeum symbiosum

Nitrite-Oxidizing Bacteria

Nitrospiraceae
Type Percent of Community Genus Species
25186 0.43 Unknown Unknown
9977 0.34 Unknown Unknown
395295 0.01 Unknown Unknown
395408 0.01 Unknown Unknown
The nitrifying community in this sample included 13 different types of microbes.

Bacterial Pathogens

None found.

Complete list of pathogens we screened for:

Eubacterium tarantellae, Lactococcus garvieae, Enterococcus seriolicida, Streptococcus parauberis, Streptococcus iniae, Mycobacterium chelonei, Mycobacterium fortuitum, Mycobacterium marinum, Mycobacterium neoaurum, Nocardia asteroides, Nocardia salmonicida, Nocardia seriolae, Renibacterium salmoninarum, Aeromonas jandaei, Aeromonas salmonicida, Serratia liquefaciens, Chryseobacterium balustinum, Chryseobacterium scophthalmum, Tenacibaculum maritimus, Tenacibaculum ovolyticus, Pasteurella skyensis, Pseudomonas anguilliseptica, Moritella marina, Moritella viscosa, Photobacterium damselae, Shewanella putrefaciens, Vibrio alginolyticus, Vibrio cholerae, Vibrio fischeri, Vibrio furnissii, Vibrio harveyi, Vibrio carchariae, Vibrio trachuri, Vibrio ichthyoenteri, Vibrio logei, Vibrio ordalii, Vibrio pelagius, Vibrio salmonicida, Vibrio splendidus, Halomonas cupida, Piscirickettsia salmonis, Vibrio shiloi, Vibrio coralliilyticus, Vibrio harveyi, Aurantimonas coralicida, Vibrio rotiferianus, Vibrio alginolyticus, Vibrio proteolyticus, Vibrio charcharvina, Serratia marcescens, Aquarickettsia rohweri

Eukaryotic Biodiversity

This sample contained DNA from 1038 different Eukaryotic sources.


This pie chart shows the diversity of each Eukaryotic Phylum detected in the sample. The size of each slice is proportional to the number of different types from each phylum. For clarity, only families containing 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Parasites

None of the DNA sequences from this sample matched known parasites.
Group Description Percent of eDNA
Amyloodinium Dinoflagellate parasites responsible for the fish disease Marine Velvet 0
Cryptocaryon Ciliate parasites responsible for the fish disease Ich 0
Brooklynella Ciliate parasites responsible for the fish disease Brook 0
Uronema Ciliate parasites responsible for a fish disease called by the same name 0
Phestilla Montipora-eating Nudibranchs 0
Amakusaplana Acropora-eating Flatworms 0
Ancyrocephalidae Flatworms often called Flukes that parasitize fish 0
Gyrodactylidae Flatworms often called Flukes that parasitize fish 0
Capsalidae Flatworms often called Flukes that parasitize fish 0
Turbonilla Snails in the family Pyramidellidae that parasitize giant clams 0
Trichodina A ciliated protozoan parasite of fish 0

Other Animal Pests

None of the DNA sequences from this sample matched known animal pests.
Group Description Percent of eDNA
Aiptasia The glass anemone, a ubiquitous pest 0
Thylacodes Vermetid snails 0
Asterina A group of sea stars that includes coral predators 0

Complete list of Eukaryotes identified

This list includes all Eukaryotes (Animals, Protists, and anything else besides Bacteria or Archaea) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Apomatus voightae (Annelida), Fabricinuda trilobata (Annelida), Syllis lutea (Annelida), Sabellastarte sp. (Annelida), Ophryotrocha labronica (Annelida), Terebella lapidaria (Annelida), Augeneriella hummelincki (Annelida), Grassleia cf. (Annelida), Fabricinuda pseudopalpa (Annelida), Syllis garciai (Annelida), Paramphinome jeffreysii (Annelida), Protula sp. (Annelida), Lankesteria hesperidiiformis (Apicomplexa), uncultured eukaryote 569082 (Apicomplexa), Nenesidea oligodentata (Arthropoda), Paramphiascella fulvofasciata (Arthropoda), Liposcelis bostrychophila (Arthropoda), Tetragonicipitidae sp. (Arthropoda), Attheyella crassa (Arthropoda), invertebrate environmental (Arthropoda), uncultured eukaryote 572875 (Arthropoda), Friedmanniomyces simplex (Ascomycota), Penicillium griseofulvum (Ascomycota), Humulus lupulus (Ascomycota), Fusarium oxysporum (Ascomycota), Capronia pilosella (Ascomycota), Umbilicaria rossica (Ascomycota), Stropharia ambigua (Basidiomycota), Wallemia sebi (Basidiomycota), Fomitopsis pinicola (Basidiomycota), Malassezia globosa (Basidiomycota), uncultured Tremellomycetes 571933 (Basidiomycota), Trametes versicolor (Basidiomycota), Megalocystidium leucoxanthum (Basidiomycota), Paradinium poucheti (Cercozoa), uncultured marine 32863 (Cercozoa), uncultured marine 15485 (Cercozoa), Haplosporidian parasite (Cercozoa), Lotharella globosa (Cercozoa), uncultured marine 405866 (Cercozoa), Lotharella oceanica (Cercozoa), Protaspis grandis (Cercozoa), marine metagenome (Cercozoa), uncultured marine 573300 (Cercozoa), uncultured Chytridiomycota 171718 (Chytridiomycota), uncultured fungus 521840 (Chytridiomycota), Amphileptus litonotiformis (Ciliophora), Thigmokeronopsis sp. (Ciliophora), uncultured eukaryote 34673 (Ciliophora), uncultured eukaryote 138061 (Ciliophora), uncultured eukaryote 281202 (Ciliophora), Adumbratosticha tetracirrata (Ciliophora), Zoothamnopsis sinica (Ciliophora), Microxysma acutum (Ciliophora), Pseudoamphisiella quadrinucleata (Ciliophora), Olindias phosphorica (Cnidaria), Melicertum octocostatum (Cnidaria), Staurocladia vallentini (Cnidaria), Polyorchis haplus (Cnidaria), Eleutheria claparedei (Cnidaria), Paramuricea sp. (Cnidaria), uncultured archaeon 83350 (Crenarchaeota), uncultured archaeon 569247 (Crenarchaeota), Psammodictyon constrictum (Diatomea), uncultured eukaryote 6222 (Diatomea), Amphora sp. (Diatomea), Haslea ostrearia (Diatomea), Navicula arenaria (Diatomea), uncultured eukaryote 52878 (Diatomea), uncultured marine 480235 (Diatomea), uncultured marine 15228 (Diatomea), uncultured eukaryote 152348 (Diatomea), uncultured eukaryote 308578 (Diatomea), Rhaphoneis sp. (Diatomea), Nitzschia sigma (Diatomea), uncultured eukaryote 402670 (Diatomea), uncultured eukaryote 568743 (Diatomea), Synedra sp. (Diatomea), uncultured stramenopile 267345 (Diatomea), uncultured marine 406296 (Diatomea), uncultured marine 510447 (Diatomea), Rhaphoneis belgicae (Diatomea), Seminavis sp. (Diatomea), uncultured marine 569254 (Diatomea), uncultured stramenopile 570806 (Diatomea), uncultured eukaryote 570817 (Diatomea), uncultured marine 570827 (Diatomea), Haslea spicula (Diatomea), uncultured eukaryote 571935 (Diatomea), uncultured marine 54837 (Diatomea), Nitzschia longissima (Diatomea), uncultured stramenopile 403231 (Diatomea), Pseudogomphonema sp. (Diatomea), Stauroneis kriegeri (Diatomea), Navicula reinhardtii (Diatomea), Amphora coffeiformis (Diatomea), uncultured stramenopile 569751 (Diatomea), uncultured marine 571928 (Diatomea), uncultured marine 572778 (Diatomea), uncultured marine 572796 (Diatomea), uncultured eukaryote 572809 (Diatomea), uncultured eukaryote 572810 (Diatomea), Navicula cryptocephala (Diatomea), uncultured stramenopile 572813 (Diatomea), uncultured stramenopile 572814 (Diatomea), uncultured stramenopile 572815 (Diatomea), Craticula molestiformis (Diatomea), uncultured marine 572818 (Diatomea), uncultured eukaryote 572883 (Diatomea), uncultured eukaryote 572897 (Diatomea), uncultured stramenopile 572898 (Diatomea), uncultured stramenopile 572900 (Diatomea), Craticula pseudocitrus (Diatomea), Phaeodactylum tricornutum (Diatomea), uncultured eukaryote 573298 (Diatomea), uncultured eukaryote 573357 (Diatomea), Cocconeis cf. (Diatomea), Ostreopsis cf. (Dinoflagellata), uncultured eukaryote 61173 (Dinoflagellata), Symbiodinium sp. (Dinoflagellata), Heterocapsa triquetra (Dinoflagellata), uncultured eukaryote 569754 (Dinoflagellata), uncultured eukaryote 572803 (Dinoflagellata), uncultured eukaryote 572830 (Dinoflagellata), uncultured eukaryote 573373 (Dinoflagellata), Diplonema sp. (Euglenozoa), Petalomonas cantuscygni (Euglenozoa), Notosolenus urceolatus (Euglenozoa), uncultured eukaryote 295877 (Euglenozoa), Neobodo designis (Euglenozoa), Paraphysomonas imperforata (Eukaryota), metagenome (Eukaryota), unidentified (Eukaryota), uncultured eukaryote 548965 (Eukaryota), uncultured stramenopile 549443 (Eukaryota), Trebouxia asymmetrica (Eukaryota), uncultured eukaryote 32619 (Eukaryota), uncultured eukaryote 568848 (Eukaryota), Phaeophila dendroides (Eukaryota), uncultured eukaryote 568048 (Eukaryota), Ulvophyceae sp. (Eukaryota), uncultured eukaryote 568634 (Eukaryota), uncultured marine 569745 (Eukaryota), Dictyota sp. (Eukaryota), Chrysophyceae sp. (Eukaryota), Akkesiphycus lubricum (Eukaryota), Cladophora socialis (Eukaryota), Monas sp. (Eukaryota), Spumella-like flagellate (Eukaryota), Ulva rigida (Eukaryota), uncultured Chlorophyta 706 (Eukaryota), uncultured marine 1201 (Eukaryota), Anurofeca richardsi (Eukaryota), Halothrix ambigua (Eukaryota), Ectocarpus siliculosus (Eukaryota), Ulvella viridis (Eukaryota), Hazenia basiliensis (Eukaryota), Scytosiphon lomentaria (Eukaryota), Vannella sp. (Eukaryota), uncultured marine 572798 (Eukaryota), uncultured stramenopile 572800 (Eukaryota), Saccorhiza polyschides (Eukaryota), Ulvella repens (Eukaryota), uncultured Chlorophyta 572894 (Eukaryota), uncultured eukaryote 572926 (Eukaryota), uncultured eukaryote 573321 (Eukaryota), uncultured eukaryote 573325 (Eukaryota), uncultured stramenopile 573329 (Eukaryota), uncultured stramenopile 573336 (Eukaryota), eukaryotic picoplankton (Eukaryota), uncultured stramenopile 573338 (Eukaryota), uncultured marine 573340 (Eukaryota), uncultured stramenopile 573343 (Eukaryota), uncultured Chlorophyta 573368 (Eukaryota), uncultured stramenopile 573377 (Eukaryota), Peyssonnelia novae-hollandiae (Florideophycidae), uncultured Corallinales 152450 (Florideophycidae), uncultured Corallinales 567854 (Florideophycidae), Peyssonnelia capensis (Florideophycidae), uncultured Corallinales 52775 (Florideophycidae), Renouxia sp. (Florideophycidae), uncultured Corallinales 2575 (Florideophycidae), uncultured Corallinales 32406 (Florideophycidae), Melobesioideae sp. (Florideophycidae), uncultured Corallinales 568586 (Florideophycidae), Cordylecladia erecta (Florideophycidae), Rhodopeltis borealis (Florideophycidae), Antithamnion aglandum (Florideophycidae), Peyssonnelia sp. (Florideophycidae), Gastroclonium pacificum (Florideophycidae), uncultured Corallinales 569753 (Florideophycidae), uncultured eukaryote 570822 (Florideophycidae), uncultured Corallinales 21317 (Florideophycidae), Lithophyllum pustulatum (Florideophycidae), uncultured Corallinales 32421 (Florideophycidae), uncultured Corallinales 64865 (Florideophycidae), uncultured Corallinales 141964 (Florideophycidae), uncultured Corallinales 314848 (Florideophycidae), uncultured Corallinales 325432 (Florideophycidae), uncultured Corallinales 422157 (Florideophycidae), uncultured eukaryote 541841 (Florideophycidae), uncultured Corallinales 570824 (Florideophycidae), uncultured Corallinales 572783 (Florideophycidae), Audouinella hermannii (Florideophycidae), Mesophyllum vancouveriense (Florideophycidae), Aspidiophorus tentaculatus (Gastrotricha), uncultured eukaryote 568949 (Gastrotricha), uncultured eukaryote 572779 (Gastrotricha), uncultured eukaryote 572781 (Gastrotricha), uncultured eukaryote 72 (Labyrinthulomycetes), uncultured marine 2482 (Labyrinthulomycetes), Aplanochytrium kerguelense (Labyrinthulomycetes), uncultured eukaryote 47361 (Labyrinthulomycetes), Labyrinthuloides minuta (Labyrinthulomycetes), uncultured eukaryote 342700 (Labyrinthulomycetes), uncultured eukaryote 71955 (Labyrinthulomycetes), uncultured eukaryote 569081 (Labyrinthulomycetes), uncultured marine 1339 (Labyrinthulomycetes), uncultured eukaryote 4861 (Labyrinthulomycetes), Thraustochytrium sp. (Labyrinthulomycetes), uncultured eukaryote 2623 (Labyrinthulomycetes), Thraustochytriidae sp. (Labyrinthulomycetes), uncultured eukaryote 1117 (Labyrinthulomycetes), Thraustochytrium multirudimentale (Labyrinthulomycetes), Oblongichytrium sp. (Labyrinthulomycetes), uncultured eukaryote 572871 (Labyrinthulomycetes), uncultured eukaryote 573363 (Labyrinthulomycetes), Myozonariinae sp. (Platyhelminthes), Macrostomum tuba (Platyhelminthes), Myozonaria fissipara (Platyhelminthes), Spirastrella sp. (Porifera), Clathrina luteoculcitella (Porifera), Clathrina sp. (Porifera), Clathrina wistariensis (Porifera), Voromonas pontica (Protalveolata), Euduboscquella sp. (Protalveolata)

Complete List of Microbes Identified

This list includes all microbes (Bacteria & Archae) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Mycobacterium sp., Unclassified Piscirickettsiaceae 58203, Unclassified Bacteria 1800, Alteromonas sp., Microbulbifer sp., Unclassified Bacteria 16462, Unclassified Rhodobacteraceae 276, Unclassified Hyphomicrobiaceae 9813, Unclassified Hyphomicrobiaceae 1489, Unclassified Ulvophyceae 27981, Inquilinus sp., Nitrosopumilus sp., Unclassified Bacteria 265473, Unclassified Bacteria 9721, Unclassified Bacteria 10668, Unclassified Bacteria 5367, Unclassified Lachnospiraceae 220739, Unclassified Bacteria 1173, Unclassified Bacteria 390959, Clostridium sp., Unclassified Pseudanabaenaceae 165660, Unclassified Nitrospiraceae 25186, A17 sp., Unclassified Coxiellaceae 390980, Unclassified Bacteria 10172, Unclassified Desulfobacteraceae 122784, Desulfosporosinus meridiei, Unclassified Bacteria 36004, Brevibacillus sp., Unclassified Ulvophyceae 122484, Unclassified Pseudanabaenaceae 193381, Unclassified Bacteria 1596, Unclassified JdFBGBact 3731, Unclassified Nitrospiraceae 9977, Unclassified Bacteria 10830, Hyphomicrobium sp., Desulfococcus sp., Bacillus sp., Unclassified Xenococcaceae 391007, Unclassified Bacteria 791, Aquimarina sp., Unclassified Bacteria 258651, Unclassified Pirellulaceae 112997, Unclassified Rhodospirillaceae 55071, Unclassified Bacteria 122543, Unclassified Pirellulaceae 391041, Gloeobacter sp., Cenarchaeum symbiosum, Unclassified Rhodospirillaceae 56010, Unclassified HTCC2089 248274, Unclassified Clostridiaceae 292655, Unclassified Pirellulaceae 391059, Unclassified Colwelliaceae 717, Unclassified Bacteria 1141, Unclassified Rhodothermaceae 70406, Unclassified Hyphomicrobiaceae 14112, Unclassified Flavobacteriaceae 30384, Alicyclobacillus sp., Unclassified Cenarchaeaceae 31722, Unclassified Bacteria 93586, Unclassified PAUC26f 226302, Unclassified Bacteria 391112, Unclassified Flammeovirgaceae 5837, Unclassified Bacteria 14517, Unclassified Phyllobacteriaceae 54828, Unclassified Bacteria 12806, Unclassified Bacteria 391142, Unclassified Rhodospirillaceae 127075, Unclassified Lachnospiraceae 258011, Unclassified Flavobacteriaceae 266274, Unclassified Pirellulaceae 391174, Unclassified Pirellulaceae 391176, Unclassified Pirellulaceae 977, Unclassified Bacteria 2905, Unclassified Legionellaceae 159100, Unclassified Ulvophyceae 166292, Unclassified Bacteria 195117, Methylosinus sp., Unclassified Legionellaceae 346164, Unclassified Bacteria 391247, Plesiocystis sp., Unclassified Legionellaceae 391254, Unclassified Bacteria 6757, Unclassified Bacteria 126647, Unclassified Flammeovirgaceae 83240, Unclassified MND4 133971, Unclassified Pseudanabaenaceae 391319, Marinobacter sp., Unclassified Desulfobulbaceae 140599, Desulfotomaculum sp., Unclassified Pirellulaceae 391360, Halomicronema sp., Vibrio sp., Unclassified Bacteria 391429, Unclassified Bacteria 2900, Unclassified Pirellulaceae 10371, Unclassified Flavobacteriaceae 35221, Unclassified Bacteria 190319, Legionella sp., Unclassified Bacteria 391491, Unclassified Bacteria 60011, Unclassified C111 141974, Unclassified JdFBGBact 391540, Unclassified JTB38 391541, Unclassified Bacteria 391545, Unclassified Bacteria 391561, Glaciecola sp., Unclassified Bacteria 2152, Unclassified Bacteria 9839, Unclassified Bacteria 144979, Unclassified Rhodospirillaceae 229606, Unclassified Xenococcaceae 254086, Unclassified Bacteria 391637, Unclassified Bacteria 391638, Thalassospira xiamenensis, Unclassified Rhodobacteraceae 830, Unclassified Nitrosomonadaceae 2503, Tepidibacter sp., Unclassified Bacteria 36382, Unclassified Flavobacteriaceae 50638, Methylibium sp., Planctomyces sp., Halostagnicola larsenii, Unclassified Bradyrhizobiaceae 1033, Unclassified Piscirickettsiaceae 25025, Unclassified Bacteria 96705, Unclassified Pirellulaceae 155937, Unclassified Bacteria 236576, Unclassified Pirellulaceae 288768, Unclassified Pirellulaceae 391905, Marinicella sp., Unclassified Piscirickettsiaceae 391915, Muricauda sp., Unclassified Micrococcaceae 154917, Unclassified Cystobacterineae 392131, Unclassified Phyllobacteriaceae 392134, Unclassified Xenococcaceae 392136, Unclassified Pirellulaceae 392143, Alcanivorax sp., Candidatus sp., Unclassified Victivallaceae 190439, Unclassified Bacteria 392409, Unclassified Xenococcaceae 392411, Unclassified Bacteria 392412, Unclassified JdFBGBact 392420, Unclassified Bacteria 949, Rickettsiella sp., Lentisphaera sp., Unclassified Bacteria 36764, Unclassified Haloplasmataceae 71073, Anaerospora sp., Unclassified Xenococcaceae 257773, Unclassified Pseudanabaenaceae 392919, Unclassified Phyllobacteriaceae 392925, Unclassified JTB38 392929, Unclassified Hyphomicrobiaceae 392935, Unclassified Piscirickettsiaceae 392937, Unclassified Bacteria 393145, Sphingomonas sp., Unclassified Rhodocyclaceae 393152, Halorhodospira sp., Unclassified Pirellulaceae 12597, Unclassified Bacteria 137922, Unclassified Bacteria 155446, Unclassified Pseudanabaenaceae 257432, Unclassified Pirellulaceae 328093, Unclassified Cenarchaeaceae 393806, Unclassified A4b 393807, Unclassified Pirellulaceae 393809, Unclassified Pirellulaceae 393813, Unclassified Pirellulaceae 393818, Unclassified Bacteria 393822, Unclassified Rhodospirillaceae 393826, Unclassified Bacteria 393830, Unclassified Rhodospirillaceae 393831, Unclassified Piscirickettsiaceae 393839, Unclassified Piscirickettsiaceae 393840, Unclassified Pirellulaceae 393842, Unclassified Desulfobacteraceae 393847, Unclassified Micromonosporaceae 394219, Unclassified Hyphomicrobiaceae 394230, Unclassified Legionellaceae 394235, Unclassified Legionellaceae 394239, Unclassified Lachnospiraceae 394241, Unclassified Bacteria 10241, Unclassified Colwelliaceae 134357, Unclassified Bacteria 143444, Unclassified Hyphomicrobiaceae 154826, Unclassified Hyphomicrobiaceae 165088, Unclassified Hyphomicrobiaceae 185751, Unclassified Bacteria 197252, Unclassified Hyphomicrobiaceae 258034, Unclassified Piscirickettsiaceae 271041, Unclassified Hyphomicrobiaceae 357585, Unclassified Bacteria 368912, Unclassified Bacteria 368925, Unclassified Desulfobacteraceae 392835, Unclassified Pirellulaceae 395262, Unclassified Desulfobacteraceae 395265, Unclassified Pirellulaceae 395272, Unclassified Pseudanabaenaceae 395274, Unclassified Bacteria 395278, Unclassified Bacteria 395279, Unclassified Rhodospirillaceae 395281, Unclassified Bacteria 395283, Unclassified Pirellulaceae 395287, Unclassified Hyphomicrobiaceae 395290, Unclassified Pirellulaceae 395291, Unclassified Pirellulaceae 395292, Unclassified Hyphomicrobiaceae 395293, Unclassified Bacteria 395294, Unclassified Nitrospiraceae 395295, Unclassified Bacteria 395298, Unclassified Xenococcaceae 395299, Unclassified Xenococcaceae 395300, Unclassified JTB38 395304, Unclassified Rhodospirillaceae 395305, Unclassified Piscirickettsiaceae 395309, Unclassified Bacteria 395310, Unclassified Bacteria 395311, Unclassified Rhodospirillaceae 395312, Unclassified Bacteria 395313, Unclassified Bacteria 395314, Unclassified Bacteria 395315, Unclassified Bacteria 395317, Unclassified Bacteria 395319, Unclassified Bacteria 395320, Unclassified Rhodospirillaceae 395321, Unclassified Bacteria 395328, Unclassified Bacteria 395329, Unclassified Bacteria 395330, Unclassified Bacteria 395331, Unclassified Rhodospirillaceae 395333, Unclassified Rhodospirillaceae 395334, Unclassified Bacteria 395335, Anaerospora hongkongensis, Unclassified Piscirickettsiaceae 395341, Loktanella sp., Unclassified Desulfobulbaceae 395347, Unclassified Bacteria 395353, Unclassified Bacteria 395354, Unclassified Bacteria 395355, Unclassified Piscirickettsiaceae 395356, Unclassified Piscirickettsiaceae 395369, Unclassified Piscirickettsiaceae 395370, Unclassified Piscirickettsiaceae 395376, Unclassified Colwelliaceae 395377, Unclassified Pirellulaceae 395382, Unclassified Bacteria 395384, Unclassified Bacteria 395385, Unclassified Bacteria 395388, Unclassified Bacteria 395389, Unclassified Bacteria 395394, Unclassified PAUC26f 395402, Unclassified Rhodospirillaceae 395404, Unclassified Pirellulaceae 395407, Unclassified Nitrospiraceae 395408, Unclassified Pirellulaceae 395924, Unclassified Rhodobacteraceae 395933, Unclassified Hyphomicrobiaceae 395935, Unclassified Bacteria 395936, Unclassified Rhodobacteraceae 395937, Unclassified Legionellaceae 395948


DNA analysis conducted by AquaBiomics LLC.

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Certificate of Analysis LRS G11.11

Certificate of Analysis: Live Reef Sand, Batch LRS G11.11

lrs.g11.11_Certificate_of_Analysis

    Certificate of Analysis



About this report

This report summarizes the results from DNA analysis of the community growing in a batch of Live Reef Sand. Universal genetic markers were amplified from microbial (prokaryotic) and other (eukaryotic) DNA in the sample, and thousands of individual DNA molecules from this mixture were sequenced. Each sequence was then compared with public DNA databases to identify its origin. This report summarizes the kinds of organisms detected in the sample, with a focus on beneficial microbes, pathogens, and parasites.

Information about this sample

Sample ID lrs.g11.11
Batch Name g12-15-25
Sample Date 03/20/2026 10:30 AM

Microbial Diversity

This sample contained DNA from 646 different types of microbes.


This pie chart shows the diversity of each microbial family found in the sample. The size of each slice is proportional to the number of different types (labels on each slice). For clarity, only families with 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Nitrifying Community

Ammonia-Oxidizing Microbes

Nitrosomonadaceae
Type Percent of Community Genus Species
2057 0.02 Unknown Unknown
Cenarchaeaceae
Type Percent of Community Genus Species
73 0.88 Nitrosopumilus Unknown
760 0.71 Nitrosopumilus Unknown
9677 0.60 Nitrosopumilus Unknown
2996 0.35 Nitrosopumilus Unknown
10731 0.31 Unknown Unknown
640 0.30 Nitrosopumilus Unknown
166208 0.30 Unknown Unknown

Nitrite-Oxidizing Bacteria

Nitrospinaceae
Type Percent of Community Genus Species
16966 0.03 Nitrospina Unknown
Nitrospiraceae
Type Percent of Community Genus Species
55498 0.60 Unknown Unknown
392705 0.03 Unknown Unknown
393432 0.02 Unknown Unknown
The nitrifying community in this sample included 12 different types of microbes.

Bacterial Pathogens

None found.

Complete list of pathogens we screened for:

Eubacterium tarantellae, Lactococcus garvieae, Enterococcus seriolicida, Streptococcus parauberis, Streptococcus iniae, Mycobacterium chelonei, Mycobacterium fortuitum, Mycobacterium marinum, Mycobacterium neoaurum, Nocardia asteroides, Nocardia salmonicida, Nocardia seriolae, Renibacterium salmoninarum, Aeromonas jandaei, Aeromonas salmonicida, Serratia liquefaciens, Chryseobacterium balustinum, Chryseobacterium scophthalmum, Tenacibaculum maritimus, Tenacibaculum ovolyticus, Pasteurella skyensis, Pseudomonas anguilliseptica, Moritella marina, Moritella viscosa, Photobacterium damselae, Shewanella putrefaciens, Vibrio alginolyticus, Vibrio cholerae, Vibrio fischeri, Vibrio furnissii, Vibrio harveyi, Vibrio carchariae, Vibrio trachuri, Vibrio ichthyoenteri, Vibrio logei, Vibrio ordalii, Vibrio pelagius, Vibrio salmonicida, Vibrio splendidus, Halomonas cupida, Piscirickettsia salmonis, Vibrio shiloi, Vibrio coralliilyticus, Vibrio harveyi, Aurantimonas coralicida, Vibrio rotiferianus, Vibrio alginolyticus, Vibrio proteolyticus, Vibrio charcharvina, Serratia marscesens, Aquarickettsia rohweri

Eukaryotic Biodiversity

This sample contained DNA from 910 different Eukaryotic sources.


This pie chart shows the diversity of each Eukaryotic Phylum detected in the sample. The size of each slice is proportional to the number of different types from each phylum. For clarity, only families with 3 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Parasites

None of the DNA sequences from this sample matched known parasites.
Group Description Percent of eDNA
Amyloodinium Dinoflagellate parasites responsible for the fish disease Marine Velvet 0
Cryptocaryon Ciliate parasites responsible for the fish disease Ich 0
Brooklynella Ciliate parasites responsible for the fish disease Brook 0
Uronema Ciliate parasites responsible for a fish disease called by the same name 0
Phestilla Montipora-eating Nudibranchs 0
Amakusaplana Acropora-eating Flatworms 0
Ancyrocephalidae Flatworms often called Flukes that parasitize fish 0
Gyrodactylidae Flatworms often called Flukes that parasitize fish 0
Capsalidae Flatworms often called Flukes that parasitize fish 0
Turbonilla Snails in the family Pyramidellidae that parasitize giant clams 0
Trichodina A ciliated protozoan parasite of fish 0

Other Animal Pests

None of the DNA sequences from this sample matched known animal pests.
Group Description Percent of eDNA
Aiptasia The glass anemone, a ubiquitous pest 0
Thylacodes Vermetid snails 0
Asterina A group of sea stars that includes coral predators 0

Complete list of Eukaryotes identified

This list includes all Eukaryotes (Animals, Protists, and anything else besides Bacteria or Archaea) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Howeina sp. (Arthropoda), Argestigens sp. (Arthropoda), Isobactrus uniscutatus (Arthropoda), Parastenhelia sp. (Arthropoda), Nannopus bulbiseta (Arthropoda), Halacarellus sp. (Arthropoda), Tydeidae gen. (Arthropoda), Scolia hirta (Arthropoda), Nenesidea oligodentata (Arthropoda), Rhombognathus areolatus (Arthropoda), Ameira scotti (Arthropoda), Clibanarius antillensis (Arthropoda), Paramenophia sp. (Arthropoda), Debaryomyces udenii (Ascomycota), Cladosporium sp. (Ascomycota), Saccharomyces uvarum (Ascomycota), Penicillium griseofulvum (Ascomycota), Acremonium chrysogenum (Ascomycota), Malassezia restricta (Basidiomycota), Malassezia globosa (Basidiomycota), Wallemia sebi (Basidiomycota), Stereum hirsutum (Basidiomycota), Trametes versicolor (Basidiomycota), Holtermannia corniformis (Basidiomycota), Neohygrocybe ingrata (Basidiomycota), Trametes hirsuta (Basidiomycota), Galerina marginata (Basidiomycota), Filobasidium floriforme (Basidiomycota), Porpolomopsis lewelliniae (Basidiomycota), Chamaeota sinica (Basidiomycota), uncultured marine 15485 (Cercozoa), Protaspis grandis (Cercozoa), uncultured marine 32863 (Cercozoa), Haplosporidian parasite (Cercozoa), uncultured Rhizaria 71229 (Cercozoa), uncultured Cercozoa 325160 (Cercozoa), uncultured eukaryote 314937 (Cercozoa), marine metagenome (Cercozoa), uncultured Cercozoa 5116 (Cercozoa), Thaumatomastigidae environmental (Cercozoa), Paradinium poucheti (Cercozoa), uncultured marine 573035 (Cercozoa), Esquamula lacrimiformis (Cercozoa), uncultured eukaryote 1354 (Ciliophora), Epicarchesium corlissi (Ciliophora), uncultured eukaryote 138061 (Ciliophora), Kiitricha marina (Ciliophora), Pseudoamphisiella quadrinucleata (Ciliophora), Amphileptus spiculatus (Ciliophora), uncultured eukaryote 569204 (Ciliophora), Zoothamnopsis sinica (Ciliophora), Thigmokeronopsis sp. (Ciliophora), Amphileptus litonotiformis (Ciliophora), Epiclintes auricularis (Ciliophora), Vaginicola sp. (Ciliophora), Melicertum octocostatum (Cnidaria), Eleutheria claparedei (Cnidaria), Diadumene leucolena (Cnidaria), Homophyllia bowerbanki (Cnidaria), Stegella lobata (Cnidaria), Millepora sp. (Cnidaria), Polyorchis haplus (Cnidaria), Nematostella vectensis (Cnidaria), Eudendrium racemosum (Cnidaria), uncultured eukaryote 574029 (Cnidaria), Pandea sp. (Cnidaria), uncultured eukaryote 402670 (Diatomea), uncultured eukaryote 52878 (Diatomea), Seminavis sp. (Diatomea), Navicula arenaria (Diatomea), uncultured eukaryote 6222 (Diatomea), Navicula reinhardtii (Diatomea), uncultured marine 15228 (Diatomea), Psammodictyon constrictum (Diatomea), Rhaphoneis belgicae (Diatomea), uncultured stramenopile 267345 (Diatomea), uncultured eukaryote 308578 (Diatomea), Pleurosigma sp. (Diatomea), uncultured marine 6226 (Diatomea), uncultured eukaryote 206394 (Diatomea), Amphora sp. (Diatomea), uncultured marine 568613 (Diatomea), uncultured marine 405198 (Diatomea), Rhaphoneis sp. (Diatomea), uncultured eukaryote 568614 (Diatomea), uncultured eukaryote 569007 (Diatomea), uncultured marine 570400 (Diatomea), uncultured marine 569566 (Diatomea), Phaeodactylum tricornutum (Diatomea), uncultured eukaryote 152348 (Diatomea), Craticula pseudocitrus (Diatomea), uncultured marine 406296 (Diatomea), Bacillariophyta sp. (Diatomea), Nitzschia longissima (Diatomea), Stauroneis kriegeri (Diatomea), Pseudogomphonema sp. (Diatomea), uncultured eukaryote 56 (Diatomea), uncultured eukaryote 171851 (Diatomea), uncultured eukaryote 309199 (Diatomea), uncultured eukaryote 550438 (Diatomea), uncultured eukaryote 568743 (Diatomea), uncultured marine 569421 (Diatomea), Cocconeis cf. (Diatomea), uncultured stramenopile 571181 (Diatomea), Paralia sulcata (Diatomea), Nitzschia sigma (Diatomea), uncultured marine 572455 (Diatomea), uncultured marine 573895 (Diatomea), uncultured stramenopile 573906 (Diatomea), Craticula molestiformis (Diatomea), uncultured marine 573939 (Diatomea), uncultured eukaryote 573985 (Diatomea), Craticula cuspidata (Diatomea), uncultured marine 574045 (Diatomea), Haslea ostrearia (Diatomea), uncultured marine 1113 (Diatomea), uncultured marine 2195 (Diatomea), uncultured marine 106781 (Diatomea), uncultured marine 186955 (Diatomea), uncultured marine 426064 (Diatomea), uncultured eukaryote 471673 (Diatomea), uncultured marine 510447 (Diatomea), uncultured eukaryote 571188 (Diatomea), uncultured eukaryote 573020 (Diatomea), uncultured marine 573021 (Diatomea), uncultured marine 573030 (Diatomea), uncultured marine 573036 (Diatomea), uncultured marine 573038 (Diatomea), uncultured marine 573894 (Diatomea), Cymatosira belgica (Diatomea), uncultured stramenopile 573907 (Diatomea), uncultured eukaryote 573909 (Diatomea), uncultured marine 573913 (Diatomea), Psammodictyon panduriforme (Diatomea), uncultured eukaryote 573934 (Diatomea), Cocconeis stauroneiformis (Diatomea), uncultured eukaryote 574012 (Diatomea), uncultured stramenopile 574019 (Diatomea), Paragymnodinium shiwhaense (Dinoflagellata), Heterocapsa triquetra (Dinoflagellata), uncultured eukaryote 434933 (Dinoflagellata), uncultured eukaryote 570403 (Dinoflagellata), Alexandrium insuetum (Dinoflagellata), Ostreopsis cf. (Dinoflagellata), Symbiodinium sp. (Dinoflagellata), uncultured marine 574086 (Dinoflagellata), uncultured eukaryote 422 (Dinoflagellata), uncultured eukaryote 61173 (Dinoflagellata), uncultured eukaryote 206378 (Dinoflagellata), Symbiodinium minutum (Dinoflagellata), uncultured eukaryote 573986 (Dinoflagellata), Cryptoperidiniopsis brodyi (Dinoflagellata), uncultured eukaryote 574085 (Dinoflagellata), uncultured eukaryote 268562 (Euglenozoa), Notosolenus urceolatus (Euglenozoa), Diplonema sp. (Euglenozoa), uncultured eukaryote 572379 (Euglenozoa), Paraphysomonas imperforata (Eukaryota), Symbiochloris sp. (Eukaryota), uncultured eukaryote 35940 (Eukaryota), Akkesiphycus lubricum (Eukaryota), Paramoeba eilhardi (Eukaryota), Ulvella repens (Eukaryota), Ulvella viridis (Eukaryota), uncultured stramenopile 571177 (Eukaryota), Vannella sp. (Eukaryota), uncultured eukaryote 514678 (Eukaryota), Paramoeba branchiphila (Eukaryota), uncultured stramenopile 573886 (Eukaryota), Gloeotilopsis planctonica (Eukaryota), Gungnir sp. (Eukaryota), uncultured eukaryote 573998 (Eukaryota), Stichococcus jenerensis (Eukaryota), uncultured eukaryote 574017 (Eukaryota), Ulvophyceae sp. (Eukaryota), Scytosiphon lomentaria (Eukaryota), Anurofeca richardsi (Eukaryota), uncultured eukaryote 568048 (Eukaryota), Phaeophila dendroides (Eukaryota), uncultured stramenopile 571178 (Eukaryota), uncultured eukaryote 573882 (Eukaryota), eukaryotic picoplankton (Eukaryota), Coccoid pelagophyte (Eukaryota), Ectocarpus siliculosus (Eukaryota), uncultured Corallinales 152450 (Florideophycidae), uncultured Corallinales 52775 (Florideophycidae), Peyssonnelia novae-hollandiae (Florideophycidae), Lithophyllum pustulatum (Florideophycidae), Colaconema proskaueri (Florideophycidae), uncultured Corallinales 568586 (Florideophycidae), uncultured Corallinales 332853 (Florideophycidae), uncultured Corallinales 541886 (Florideophycidae), uncultured Corallinales 573967 (Florideophycidae), uncultured Corallinales 573973 (Florideophycidae), Rhodopeltis borealis (Florideophycidae), Melobesioideae sp. (Florideophycidae), uncultured Corallinales 574039 (Florideophycidae), uncultured Corallinales 574041 (Florideophycidae), Peyssonnelia capensis (Florideophycidae), Synarthrophyton patena (Florideophycidae), uncultured Corallinales 141964 (Florideophycidae), uncultured Corallinales 570824 (Florideophycidae), uncultured eukaryote 574037 (Florideophycidae), Naccaria wiggii (Florideophycidae), uncultured Corallinales 574044 (Florideophycidae), uncultured Corallinales 574048 (Florideophycidae), uncultured Corallinales 574049 (Florideophycidae), Mesophyllum vancouveriense (Florideophycidae), uncultured marine 2482 (Labyrinthulomycetes), Aplanochytrium kerguelense (Labyrinthulomycetes), uncultured eukaryote 72 (Labyrinthulomycetes), uncultured eukaryote 71955 (Labyrinthulomycetes), Oblongichytrium sp. (Labyrinthulomycetes), uncultured eukaryote 269 (Labyrinthulomycetes), uncultured marine 1339 (Labyrinthulomycetes), Thraustochytrium multirudimentale (Labyrinthulomycetes), Aplanochytrium sp. (Labyrinthulomycetes), uncultured eukaryote 190854 (Labyrinthulomycetes), Labyrinthuloides minuta (Labyrinthulomycetes), uncultured eukaryote 324820 (Nematozoa), Camacolaimus sp. (Nematozoa), Syringolaimus sp. (Nematozoa), Leptolaimus sp. (Nematozoa), uncultured eukaryote 573863 (Nematozoa), Hexapterella gentianoides (Phragmoplastophyta), Prunus persica (Phragmoplastophyta), Cucumis sativus (Phragmoplastophyta), Aphroceras sp. (Porifera), Leuconia nivea (Porifera), Pleraplysilla spinifera (Porifera), uncultured eukaryote 97927 (Protalveolata), uncultured eukaryote 569333 (Protalveolata), uncultured eukaryote 572479 (Protalveolata), uncultured eukaryote 1059 (uncultured), uncultured eukaryote 569221 (uncultured), uncultured eukaryote 119691 (uncultured), uncultured eukaryote 569910 (uncultured), uncultured eukaryote 572464 (uncultured), uncultured alveolate 573905 (uncultured), uncultured eukaryote 573972 (uncultured), metagenome (uncultured)

Complete List of Microbes Identified

This list includes all microbes (Bacteria & Archae) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Mycobacterium sp., Photobacterium angustum, Unclassified Bacteria 171772, Unclassified Bacteria 99482, Unclassified Bacteria 10241, Unclassified Bacteria 26049, Unclassified Bacteria 58502, Unclassified Bacteria 9721, Unclassified Piscirickettsiaceae 390907, Propionibacterium acnes, Unclassified Legionellaceae 390918, Nitrosopumilus sp., Unclassified Bacteria 155446, Xenococcus sp., Microbulbifer sp., Unclassified Bacteria 248316, Unclassified Bacteria 16462, Corynebacterium kroppenstedtii, Desulfococcus sp., Unclassified Nitrospiraceae 55498, Unclassified Xenococcaceae 43854, Unclassified Legionellaceae 220528, Unclassified Bacteria 12806, Unclassified Bacteria 220539, Unclassified Bacteria 226262, Unclassified Bacteria 93586, Unclassified Coxiellaceae 359934, Unclassified Legionellaceae 363550, Vibrio sp., Unclassified Bacteria 27069, Unclassified Bacteria 245270, Clostridium sp., Unclassified Hyphomicrobiaceae 1489, Unclassified Cenarchaeaceae 10731, Unclassified Xenococcaceae 132144, Unclassified Bradyrhizobiaceae 1033, Unclassified Rhodobacteraceae 1492, Unclassified Lachnospiraceae 110488, Unclassified Cenarchaeaceae 166208, Unclassified OM60 235152, Unclassified Pirellulaceae 4596, Unclassified Bacteria 10172, Unclassified Thiotrichaceae 40459, Unclassified Flammeovirgaceae 88338, Unclassified Verrucomicrobiaceae 287095, Unclassified Saprospiraceae 391087, Unclassified Bacteria 25504, Staphylococcus aureus, Unclassified JdFBGBact 1704, Unclassified Bacteria 67693, Unclassified Bacteria 100231, Unclassified Pirellulaceae 391113, Unclassified Bacteria 74194, Unclassified Bacteria 195054, Unclassified Bacteria 391127, Unclassified Legionellaceae 28147, Unclassified Bacteria 81096, Unclassified Bacteria 391158, Unclassified Bacteria 30, Inquilinus sp., Unclassified Coxiellaceae 172750, Unclassified Criblamydiaceae 391204, Unclassified Hyphomicrobiaceae 105, Unclassified Bacteria 99471, Unclassified Flavobacteriaceae 109085, Unclassified Bacteria 391221, Unclassified Bacteria 791, Unclassified koll13 93630, Unclassified Lachnospiraceae 220739, Unclassified Phyllobacteriaceae 391287, Unclassified Phyllobacteriaceae 236, Unclassified Bacteria 36764, Unclassified Simkaniaceae 186909, Unclassified Bacteria 391305, Unclassified Piscirickettsiaceae 391307, Unclassified Bacteria 391326, Unclassified Bacteria 9651, Psychrobacter sp., Unclassified Rhodospirillaceae 391369, Unclassified Clostridiaceae 391370, Unclassified Bacteria 5750, Unclassified Flavobacteriaceae 33271, Unclassified Bacteria 67898, Unclassified Piscirickettsiaceae 237752, Unclassified Rhodobacteraceae 694, Streptococcus sp., Unclassified Legionellaceae 117161, Unclassified Bacteria 391452, Tenacibaculum sp., Thiothrix sp., Methylotenera mobilis, Unclassified Bacteria 1311, Unclassified Bacteria 10790, Aquimarina sp., Unclassified Piscirickettsiaceae 67508, Unclassified [Amoebophilaceae] 93818, Unclassified Bacteria 391605, Unclassified Piscirickettsiaceae 391607, Unclassified Oxalobacteraceae 653, Unclassified Rickettsiaceae 32165, Coxiella sp., Unclassified Bacteria 274385, Unclassified Phyllobacteriaceae 364370, Unclassified Thiotrichaceae 391699, Unclassified Bacteria 391752, Halomonas sp., Unclassified Flavobacteriaceae 177, Nocardia sp., Unclassified Flammeovirgaceae 83240, Unclassified wb1_P06 102604, Unclassified Bacteria 391843, Unclassified Bacteria 391847, Unclassified Hyphomonadaceae 391849, Unclassified Flammeovirgaceae 391858, Unclassified Pirellulaceae 391925, Unclassified Rhodospirillaceae 391927, Unclassified Hyphomicrobiaceae 391929, Unclassified Hyphomicrobiaceae 391930, Corynebacterium sp., Unclassified Bacteria 13895, Unclassified Pirellulaceae 14949, Unclassified Bacteria 159273, Unclassified Bacteria 245978, Unclassified Thiotrichaceae 270668, Unclassified Saprospiraceae 392045, Unclassified Bacteria 392050, Unclassified Flammeovirgaceae 392053, Photobacterium sp., Unclassified OM60 392057, Unclassified Bacteria 7237, Unclassified Lentisphaeraceae 16575, Unclassified Bacteria 68240, Unclassified Cryomorphaceae 75413, Unclassified Bacteria 147169, Methylobacterium adhaesivum, Unclassified Bacteria 226006, Unclassified Bacteria 248176, Unclassified Comamonadaceae 376774, Unclassified [Amoebophilaceae] 392312, Unclassified Bacteria 392314, Unclassified Bacteria 392315, Unclassified Bacteria 392318, Unclassified Bacteria 392451, Leucothrix sp., Lactococcus sp., Unclassified Bacteria 6567, Nitrospina sp., Unclassified Rhodobacteraceae 122626, Epulopiscium sp., Unclassified Bacteria 165851, Unclassified JdFBGBact 171953, Unclassified Nitrospiraceae 392705, Unclassified Phyllobacteriaceae 392989, Unclassified Flavobacteriaceae 392992, Unclassified Syntrophobacteraceae 392994, Fusobacterium sp., Unclassified Bacteria 77, Unclassified Nitrosomonadaceae 2057, Persicirhabdus sp., Unclassified Hyphomicrobiaceae 185751, Unclassified wb1_P06 237271, Unclassified lheB3-7 237291, Unclassified Hyphomicrobiaceae 253025, Unclassified Thermoactinomycetaceae 253831, Planctomyces sp., Unclassified Bacteria 393430, Unclassified Nitrospiraceae 393432, Unclassified Piscirickettsiaceae 393441, Unclassified Flammeovirgaceae 393443, Unclassified Pirellulaceae 393930, Unclassified Verrucomicrobiaceae 393942, Unclassified Bacteria 393944, Unclassified Hyphomicrobiaceae 393945, Unclassified Criblamydiaceae 393949, Unclassified Bacteria 393951, Unclassified Bacteria 393952, Unclassified Piscirickettsiaceae 1261, Citromicrobium sp., Unclassified Ectothiorhodospiraceae 106526, Salinisphaera sp., Unclassified Thiotrichaceae 225032, Unclassified Thiotrichaceae 348899, Unclassified Hyphomicrobiaceae 357585, Unclassified Rhodobacteraceae 360058, Unclassified Bacteria 386933, Unclassified Piscirickettsiaceae 394682, Unclassified Piscirickettsiaceae 394684, Unclassified Pirellulaceae 394687, Unclassified Bacteria 394691, Unclassified Bacteria 394692, Unclassified Bacteria 394693, Unclassified Bacteria 394699, Unclassified Piscirickettsiaceae 394711, Unclassified OM60 394712, Unclassified Bacteria 394716, Unclassified Pirellulaceae 394720, Unclassified Xenococcaceae 394725, Unclassified Bacteria 394727, Unclassified Bacteria 394733, Unclassified Flammeovirgaceae 394742, Unclassified Ectothiorhodospiraceae 394745, Unclassified Ectothiorhodospiraceae 394746, Unclassified OM60 394752, Unclassified Bacteria 394753, Unclassified Bacteria 394754, Unclassified Thiotrichaceae 394755, Unclassified Bacteria 394759, Unclassified Ectothiorhodospiraceae 394767, Unclassified Piscirickettsiaceae 394776, Unclassified Bacteria 394780, Unclassified Bacteria 394782, Unclassified Bacteria 394784, Unclassified Bacteria 395531, Unclassified Rickettsiaceae 395532, Unclassified Rhodobacteraceae 395537, Unclassified Simkaniaceae 395543, Unclassified [Amoebophilaceae] 395551, Clostridiisalibacter sp.


DNA analysis conducted by AquaBiomics LLC.

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Certificate of Analysis LRR G11.21

Certificate of Analysis: Live Reef Rubble, Batch LRR G11.21

lrr.g11.21_Certificate_of_Analysis

    Certificate of Analysis



About this report

This report summarizes the results from DNA analysis of the community growing in and on a batch of Live Reef Rubble. Universal genetic markers were amplified from microbial (prokaryotic) and other (eukaryotic) DNA in the sample, and thousands of individual DNA molecules from this mixture were sequenced. Each sequence was then compared with public DNA databases to identify its origin. This report summarizes the kinds of organisms detected in the sample, with a focus on beneficial microbes, pathogens, and parasites.

Information about this sample

Sample ID lrr.g11.21
Batch Name g12-15-25
Sample Date 03/20/2026 10:30 AM

Microbial Diversity

This sample contained DNA from 487 different types of microbes.


This pie chart shows the diversity of each microbial family found in the sample. The size of each slice is proportional to the number of different types (labels on each slice). For clarity, only families containing 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Nitrifying Community

Ammonia-Oxidizing Microbes

Nitrosomonadaceae
Type Percent of Community Genus Species
2503 0.08 Unknown Unknown
Nitrososphaeraceae
Type Percent of Community Genus Species
4288 0.39 Candidatus Unknown
Cenarchaeaceae
Type Percent of Community Genus Species
73 1.72 Nitrosopumilus Unknown
108976 1.41 Nitrosopumilus Unknown
9677 1.16 Nitrosopumilus Unknown
3535 1.06 Cenarchaeum symbiosum
34770 0.41 Unknown Unknown

Nitrite-Oxidizing Bacteria

Nitrospiraceae
Type Percent of Community Genus Species
2912 1.74 Unknown Unknown
The nitrifying community in this sample included 8 different types of microbes.

Bacterial Pathogens

None found.

Complete list of pathogens we screened for:

Eubacterium tarantellae, Lactococcus garvieae, Enterococcus seriolicida, Streptococcus parauberis, Streptococcus iniae, Mycobacterium chelonei, Mycobacterium fortuitum, Mycobacterium marinum, Mycobacterium neoaurum, Nocardia asteroides, Nocardia salmonicida, Nocardia seriolae, Renibacterium salmoninarum, Aeromonas jandaei, Aeromonas salmonicida, Serratia liquefaciens, Chryseobacterium balustinum, Chryseobacterium scophthalmum, Tenacibaculum maritimus, Tenacibaculum ovolyticus, Pasteurella skyensis, Pseudomonas anguilliseptica, Moritella marina, Moritella viscosa, Photobacterium damselae, Shewanella putrefaciens, Vibrio alginolyticus, Vibrio cholerae, Vibrio fischeri, Vibrio furnissii, Vibrio harveyi, Vibrio carchariae, Vibrio trachuri, Vibrio ichthyoenteri, Vibrio logei, Vibrio ordalii, Vibrio pelagius, Vibrio salmonicida, Vibrio splendidus, Halomonas cupida, Piscirickettsia salmonis, Vibrio shiloi, Vibrio coralliilyticus, Vibrio harveyi, Aurantimonas coralicida, Vibrio rotiferianus, Vibrio alginolyticus, Vibrio proteolyticus, Vibrio charcharvina, Serratia marcescens, Aquarickettsia rohweri

Eukaryotic Biodiversity

This sample contained DNA from 379 different Eukaryotic sources.


This pie chart shows the diversity of each Eukaryotic Phylum detected in the sample. The size of each slice is proportional to the number of different types from each phylum. For clarity, only families containing 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Parasites

None of the DNA sequences from this sample matched known parasites.
Group Description Percent of eDNA
Amyloodinium Dinoflagellate parasites responsible for the fish disease Marine Velvet 0
Cryptocaryon Ciliate parasites responsible for the fish disease Ich 0
Brooklynella Ciliate parasites responsible for the fish disease Brook 0
Uronema Ciliate parasites responsible for a fish disease called by the same name 0
Phestilla Montipora-eating Nudibranchs 0
Amakusaplana Acropora-eating Flatworms 0
Ancyrocephalidae Flatworms often called Flukes that parasitize fish 0
Gyrodactylidae Flatworms often called Flukes that parasitize fish 0
Capsalidae Flatworms often called Flukes that parasitize fish 0
Turbonilla Snails in the family Pyramidellidae that parasitize giant clams 0
Trichodina A ciliated protozoan parasite of fish 0

Other Animal Pests

None of the DNA sequences from this sample matched known animal pests.
Group Description Percent of eDNA
Aiptasia The glass anemone, a ubiquitous pest 0
Thylacodes Vermetid snails 0
Asterina A group of sea stars that includes coral predators 0

Complete list of Eukaryotes identified

This list includes all Eukaryotes (Animals, Protists, and anything else besides Bacteria or Archaea) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Terebella lapidaria (Annelida), Grassleia cf. (Annelida), Sabellastarte sp. (Annelida), Dinophilus gyrociliatus (Annelida), Polycirrus carolinensis (Annelida), Apomatus voightae (Annelida), uncultured eukaryote 567935 (Apicomplexa), uncultured eukaryote 568305 (Apicomplexa), Lankesteria hesperidiiformis (Apicomplexa), Artemia salina (Arthropoda), Mysis oculata (Arthropoda), Friedmanniomyces simplex (Ascomycota), Penicillium griseofulvum (Ascomycota), Cladosporium sp. (Ascomycota), Bagnisiella examinans (Ascomycota), Filobasidium floriforme (Basidiomycota), Malassezia restricta (Basidiomycota), Wallemia sebi (Basidiomycota), Stropharia ambigua (Basidiomycota), Neohygrocybe ingrata (Basidiomycota), uncultured marine 32863 (Cercozoa), Paradinium poucheti (Cercozoa), uncultured marine 15485 (Cercozoa), Haplosporidian parasite (Cercozoa), marine metagenome (Cercozoa), Philaster sinensis (Ciliophora), Dysteria pectinata (Ciliophora), Olindias phosphorica (Cnidaria), Eudendrium racemosum (Cnidaria), uncultured archaeon 569189 (Crenarchaeota), uncultured archaeon 83350 (Crenarchaeota), uncultured marine 141668 (Diatomea), Amphora sp. (Diatomea), Navicula reinhardtii (Diatomea), uncultured stramenopile 569751 (Diatomea), Pseudostaurosira elliptica (Diatomea), uncultured eukaryote 6222 (Diatomea), uncultured marine 6945 (Diatomea), Haslea ostrearia (Diatomea), uncultured eukaryote 574142 (Diatomea), Pfiesteria-like sp. (Dinoflagellata), Heterocapsa triquetra (Dinoflagellata), Symbiodinium sp. (Dinoflagellata), uncultured eukaryote 568724 (Euglenozoa), Diplonema sp. (Euglenozoa), Paraphysomonas imperforata (Eukaryota), Trebouxia asymmetrica (Eukaryota), uncultured marine 1201 (Eukaryota), uncultured eukaryote 568634 (Eukaryota), Rhinomonas pauca (Eukaryota), Scenedesmus sp. (Eukaryota), Ulvophyceae sp. (Eukaryota), Akkesiphycus lubricum (Eukaryota), Ulvella viridis (Eukaryota), Phaeophila dendroides (Eukaryota), uncultured stramenopile 573127 (Eukaryota), Scytosiphon lomentaria (Eukaryota), Peyssonnelia novae-hollandiae (Florideophycidae), Lithophyllum pustulatum (Florideophycidae), uncultured Corallinales 32406 (Florideophycidae), uncultured Corallinales 21317 (Florideophycidae), Peyssonnelia sp. (Florideophycidae), uncultured Corallinales 567854 (Florideophycidae), Peyssonnelia capensis (Florideophycidae), uncultured Corallinales 32421 (Florideophycidae), Renouxia sp. (Florideophycidae), Gastroclonium pacificum (Florideophycidae), uncultured Corallinales 325121 (Florideophycidae), uncultured Corallinales 32614 (Florideophycidae), uncultured Corallinales 52775 (Florideophycidae), uncultured Corallinales 207352 (Florideophycidae), uncultured Corallinales 337654 (Florideophycidae), uncultured Corallinales 568551 (Florideophycidae), uncultured Corallinales 152450 (Florideophycidae), uncultured Corallinales 569155 (Florideophycidae), uncultured Corallinales 142157 (Florideophycidae), uncultured Corallinales 325432 (Florideophycidae), uncultured Corallinales 326013 (Florideophycidae), uncultured Corallinales 64865 (Florideophycidae), Melobesioideae sp. (Florideophycidae), uncultured Corallinales 572506 (Florideophycidae), Synarthrophyton patena (Florideophycidae), uncultured Corallinales 2575 (Florideophycidae), uncultured Corallinales 141964 (Florideophycidae), uncultured Corallinales 147857 (Florideophycidae), uncultured Corallinales 199057 (Florideophycidae), uncultured Corallinales 403484 (Florideophycidae), uncultured Corallinales 404728 (Florideophycidae), uncultured Corallinales 422157 (Florideophycidae), Mesophyllum vancouveriense (Florideophycidae), uncultured Corallinales 568586 (Florideophycidae), uncultured Corallinales 569753 (Florideophycidae), Sonderopelta coriacea (Florideophycidae), Pachymenia cf. (Florideophycidae), uncultured Corallinales 574130 (Florideophycidae), Lithothamnion glaciale (Florideophycidae), uncultured Corallinales 574135 (Florideophycidae), uncultured Corallinales 574136 (Florideophycidae), uncultured Corallinales 574139 (Florideophycidae), uncultured eukaryote 72 (Labyrinthulomycetes), Aplanochytrium kerguelense (Labyrinthulomycetes), uncultured marine 2482 (Labyrinthulomycetes), uncultured eukaryote 518748 (Labyrinthulomycetes), Chaetopleura apiculata (Mollusca), Turbo cornutus (Mollusca), Spirastrella sp. (Porifera)

Complete List of Microbes Identified

This list includes all microbes (Bacteria & Archae) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Unclassified Desulfobacteraceae 122784, Unclassified Nitrospiraceae 2912, Nitrosopumilus sp., Unclassified Piscirickettsiaceae 55043, Unclassified Bacteria 5367, Inquilinus sp., Unclassified Piscirickettsiaceae 107004, Unclassified Bacteria 55095, Desulfococcus sp., Cenarchaeum symbiosum, Unclassified Hyphomicrobiaceae 1489, Unclassified Bacteria 218750, Unclassified Bacteria 1800, Unclassified Bradyrhizobiaceae 1033, Unclassified Bacteria 36004, Unclassified Bacteria 70287, Unclassified Piscirickettsiaceae 106987, Unclassified Pseudanabaenaceae 165660, Unclassified OM60 181898, Unclassified Bacteria 391000, Unclassified JdFBGBact 1704, Unclassified Pirellulaceae 391006, Unclassified Hyphomicrobiaceae 185751, Unclassified Rhodospirillaceae 55071, Unclassified Desulfobacteraceae 244808, Unclassified Pirellulaceae 391039, Unclassified Bacteria 16462, Unclassified Bacteria 67864, A17 sp., Unclassified Bacteria 391055, Unclassified Cenarchaeaceae 34770, Candidatus sp., Microbulbifer sp., Unclassified Clostridiaceae 292655, Unclassified Pirellulaceae 391088, Unclassified Flavobacteriaceae 30384, Clostridium sp., Unclassified Bacteria 201584, Unclassified Bacteria 391108, Unclassified Bacteria 235111, Alteromonas sp., Unclassified Bacteria 391170, Unclassified PAUC26f 391197, Thalassomonas sp., Unclassified Microbacteriaceae 241837, Unclassified Bacteria 334125, Mycobacterium sp., Unclassified Bacteria 391279, Unclassified Bacteria 5871, Unclassified Bacteria 126647, Unclassified Ulvophyceae 195264, Unclassified Peptostreptococcaceae 165872, Unclassified Coxiellaceae 66758, Planctomyces sp., Unclassified C111 15628, Unclassified Bacteria 391458, Unclassified Bacteria 9129, Unclassified Bacteria 9839, Unclassified Lachnospiraceae 220739, Unclassified Bacteria 245749, Unclassified Bacteria 391527, Unclassified Bacteria 391528, Unclassified Rhodobacteraceae 391530, Unclassified Verrucomicrobiaceae 35156, Unclassified Bacteria 63334, Staphylococcus aureus, Methylobacterium sp., Roseivirga sp., Unclassified Flammeovirgaceae 220481, Unclassified Bacteria 391720, Unclassified Syntrophobacteraceae 13230, Unclassified Saprospiraceae 67943, Unclassified Bacteria 172704, Unclassified Syntrophobacteraceae 194097, Unclassified Xenococcaceae 211113, Unclassified Desulfobacteraceae 368943, Unclassified Bacteria 391887, Unclassified Nitrosomonadaceae 2503, Unclassified Pirellulaceae 8175, Halomicronema sp., Unclassified Pseudanabaenaceae 250788, Unclassified Rhodospirillaceae 392092, Unclassified Piscirickettsiaceae 392095, Unclassified Flavobacteriaceae 392096, Unclassified Bacteria 392097, Unclassified Bacteria 359, Unclassified Bacillaceae 6949, Unclassified Piscirickettsiaceae 232152, Unclassified Piscirickettsiaceae 268846, Verrucomicrobium sp., Unclassified Rhodobacteraceae 392357, Unclassified Bacteria 392359, Unclassified Bacteria 392361, Unclassified Bacteria 392363, Unclassified Piscirickettsiaceae 392366, Unclassified Bacteria 392367, Bacillus sp., Unclassified Bacteria 392501, Phormidium sp., Unclassified Bacteria 1039, Unclassified Oceanospirillaceae 1193, Unclassified Bacteria 1889, Unclassified Pirellulaceae 19546, Unclassified Bacteria 60011, Balneola sp., Unclassified Bacteria 259418, Unclassified Bacteria 267572, Unclassified Pirellulaceae 392810, Unclassified Pseudanabaenaceae 392815, Unclassified Desulfobacteraceae 392826, Unclassified Bacteria 392830, Unclassified Bacteria 392831, Unclassified OM60 392833, Unclassified Bacteria 392834, Unclassified Flammeovirgaceae 392836, Unclassified Bacteria 392838, Unclassified PAUC26f 392839, Methylibium sp., Herbaspirillum sp., Unclassified Rhodospirillaceae 4370, SC3-56 sp., Unclassified Pirellulaceae 346334, Unclassified Desulfobacteraceae 392835, Unclassified C111 393610, Unclassified C111 393611, Unclassified Rhodospirillaceae 393615, Unclassified Bacteria 393618, Unclassified Bacteria 393625, Unclassified Hyphomicrobiaceae 393627, Unclassified Hyphomicrobiaceae 393634, Unclassified Bacteria 393635, Unclassified Piscirickettsiaceae 393637, Unclassified Rhodospirillaceae 393639, Unclassified Bacteria 393640, Unclassified Bacteria 393641, Unclassified Bacteria 393642, Unclassified Bacteria 393643, Unclassified Bacteria 393645, Unclassified Flammeovirgaceae 393653, Unclassified Bacteria 393658, Unclassified Desulfobacteraceae 393662, Unclassified Hyphomicrobiaceae 394074, Unclassified JdFBGBact 10625, Unclassified Piscirickettsiaceae 266086, Unclassified Flavobacteriaceae 366995, Unclassified Pirellulaceae 394923, Unclassified Piscirickettsiaceae 394924, Unclassified JdFBGBact 394928, Unclassified Pirellulaceae 394929, Unclassified OM60 394933, Unclassified Rhodospirillaceae 394937, Unclassified Rhodospirillaceae 394939, Unclassified Piscirickettsiaceae 394943, Unclassified Bacteria 394944, Unclassified Bacteria 394953, Unclassified Hyphomicrobiaceae 394954, Unclassified Bacteria 394955, Unclassified Bacteria 394961, Unclassified Pseudanabaenaceae 394963, Unclassified Hyphomicrobiaceae 394964, Unclassified Rhodospirillaceae 394967, Unclassified Bacteria 394971, Unclassified Bacteria 394974, Unclassified Bacteria 394975, Unclassified Bacteria 394976, Unclassified Bacteria 394977, Unclassified Bacteria 394979, Unclassified Bacteria 394980, Unclassified Bacteria 394981, Unclassified Bacteria 394982, Unclassified Bacteria 394983, Unclassified Bacteria 394984, Unclassified Bacteria 394987, Unclassified Bacteria 394991, Unclassified Rhodobacteraceae 394993, Unclassified Rhodospirillaceae 394994, Unclassified Rhodospirillaceae 394995, Unclassified Bacteria 394997, Unclassified Rhodobacteraceae 395001, Unclassified Flammeovirgaceae 395006, Unclassified Bacteria 395007, Unclassified Bacteria 395013, Unclassified Bacteria 395014, Unclassified Bacteria 395015, Unclassified Piscirickettsiaceae 395024, Unclassified Piscirickettsiaceae 395025, Unclassified Piscirickettsiaceae 395026, Unclassified Piscirickettsiaceae 395027, Unclassified Bacteria 395028, Unclassified Pseudanabaenaceae 395029, Unclassified Bacteria 395032, Unclassified Rhodospirillaceae 395033, Unclassified Pirellulaceae 395044, Unclassified Clostridiaceae 395046


DNA analysis conducted by AquaBiomics LLC.

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Certificate of Analysis LRS G11.3

Certificate of Analysis: Live Reef Sand, Batch LRS G11.3

lrs.g11.3_Certificate_of_Analysis

    Certificate of Analysis



About this report

This report summarizes the results from DNA analysis of the community growing in a batch of Live Reef Sand. Universal genetic markers were amplified from microbial (prokaryotic) and other (eukaryotic) DNA in the sample, and thousands of individual DNA molecules from this mixture were sequenced. Each sequence was then compared with public DNA databases to identify its origin. This report summarizes the kinds of organisms detected in the sample, with a focus on beneficial microbes, pathogens, and parasites.

Information about this sample

Sample ID lrs.g11.3
Batch Name g12-15-25
Sample Date 2/12/26 9:20 AM

Microbial Diversity

This sample contained DNA from 947 different types of microbes.


This pie chart shows the diversity of each microbial family found in the sample. The size of each slice is proportional to the number of different types (labels on each slice). For clarity, only families with 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Nitrifying Community

Ammonia-Oxidizing Microbes

Nitrosomonadaceae
Type Percent of Community Genus Species
2057 0.13 Unknown Unknown
104582 0.06 Unknown Unknown
Nitrososphaeraceae
Type Percent of Community Genus Species
4288 0.06 Candidatus Unknown
Cenarchaeaceae
Type Percent of Community Genus Species
640 3.95 Nitrosopumilus Unknown
73 0.67 Nitrosopumilus Unknown
9677 0.61 Nitrosopumilus Unknown
31722 0.54 Unknown Unknown
2996 0.24 Nitrosopumilus Unknown
74696 0.15 Cenarchaeum symbiosum

Nitrite-Oxidizing Bacteria

Nitrospiraceae
Type Percent of Community Genus Species
55498 0.28 Unknown Unknown
25423 0.09 Unknown Unknown
365137 0.05 Unknown Unknown
The nitrifying community in this sample included 12 different types of microbes.

Bacterial Pathogens

None found.

Complete list of pathogens we screened for:

Eubacterium tarantellae, Lactococcus garvieae, Enterococcus seriolicida, Streptococcus parauberis, Streptococcus iniae, Mycobacterium chelonei, Mycobacterium fortuitum, Mycobacterium marinum, Mycobacterium neoaurum, Nocardia asteroides, Nocardia salmonicida, Nocardia seriolae, Renibacterium salmoninarum, Aeromonas jandaei, Aeromonas salmonicida, Serratia liquefaciens, Chryseobacterium balustinum, Chryseobacterium scophthalmum, Tenacibaculum maritimus, Tenacibaculum ovolyticus, Pasteurella skyensis, Pseudomonas anguilliseptica, Moritella marina, Moritella viscosa, Photobacterium damselae, Shewanella putrefaciens, Vibrio alginolyticus, Vibrio cholerae, Vibrio fischeri, Vibrio furnissii, Vibrio harveyi, Vibrio carchariae, Vibrio trachuri, Vibrio ichthyoenteri, Vibrio logei, Vibrio ordalii, Vibrio pelagius, Vibrio salmonicida, Vibrio splendidus, Halomonas cupida, Piscirickettsia salmonis, Vibrio shiloi, Vibrio coralliilyticus, Vibrio harveyi, Aurantimonas coralicida, Vibrio rotiferianus, Vibrio alginolyticus, Vibrio proteolyticus, Vibrio charcharvina, Serratia marscesens, Aquarickettsia rohweri

Eukaryotic Biodiversity

This sample contained DNA from 1214 different Eukaryotic sources.


This pie chart shows the diversity of each Eukaryotic Phylum detected in the sample. The size of each slice is proportional to the number of different types from each phylum. For clarity, only families with 3 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Parasites

None of the DNA sequences from this sample matched known parasites.
Group Description Percent of eDNA
Amyloodinium Dinoflagellate parasites responsible for the fish disease Marine Velvet 0
Cryptocaryon Ciliate parasites responsible for the fish disease Ich 0
Brooklynella Ciliate parasites responsible for the fish disease Brook 0
Uronema Ciliate parasites responsible for a fish disease called by the same name 0
Phestilla Montipora-eating Nudibranchs 0
Amakusaplana Acropora-eating Flatworms 0
Ancyrocephalidae Flatworms often called Flukes that parasitize fish 0
Gyrodactylidae Flatworms often called Flukes that parasitize fish 0
Capsalidae Flatworms often called Flukes that parasitize fish 0
Turbonilla Snails in the family Pyramidellidae that parasitize giant clams 0
Trichodina A ciliated protozoan parasite of fish 0

Other Animal Pests

None of the DNA sequences from this sample matched known animal pests.
Group Description Percent of eDNA
Aiptasia The glass anemone, a ubiquitous pest 0
Thylacodes Vermetid snails 0
Asterina A group of sea stars that includes coral predators 0

Complete list of Eukaryotes identified

This list includes all Eukaryotes (Animals, Protists, and anything else besides Bacteria or Archaea) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

uncultured eukaryote 548630 (Apicomplexa), Gregarinidae sp. (Apicomplexa), uncultured eukaryote 549143 (Apicomplexa), Selenidium pygospionis (Apicomplexa), Selenidium sp. (Apicomplexa), Howeina sp. (Arthropoda), Acaromantis vespucioi (Arthropoda), Artemia salina (Arthropoda), Ophiosphaerella herpotricha (Ascomycota), Humulus lupulus (Ascomycota), Aspergillus cristatus (Ascomycota), Curvularia kusanoi (Ascomycota), Stenella araguata (Ascomycota), Debaryomyces udenii (Ascomycota), Cucurbitaria berberidis (Ascomycota), Wallemia sebi (Basidiomycota), Psathyrella candolleana (Basidiomycota), Nidula niveotomentosa (Basidiomycota), Cystofilobasidium infirmominiatum (Basidiomycota), Cyphobasidium hypogymniicola (Basidiomycota), Neohygrocybe ingrata (Basidiomycota), Paulinella chromatophora (Cercozoa), marine metagenome (Cercozoa), Corythionella minima (Cercozoa), uncultured eukaryote 548798 (Cercozoa), Gromia oviformis (Cercozoa), uncultured marine 549185 (Cercozoa), uncultured eukaryote 549014 (Cercozoa), uncultured marine 15485 (Cercozoa), uncultured Rhizaria 163170 (Cercozoa), uncultured eukaryote 314937 (Cercozoa), Paradinium sp. (Cercozoa), Minorisa sp. (Cercozoa), uncultured eukaryote 5222 (Cercozoa), uncultured eukaryote 549865 (Cercozoa), uncultured eukaryote 278122 (Cercozoa), Reckertia gemma (Cercozoa), Pseudopirsonia mucosa (Cercozoa), uncultured eukaryote 550850 (Cercozoa), Allas diplophysa (Cercozoa), uncultured Rhizaria 552907 (Cercozoa), uncultured Cercozoa 552969 (Cercozoa), uncultured marine 553012 (Cercozoa), Protaspis grandis (Cercozoa), uncultured Cercozoa 1180 (Cercozoa), Paradinium poucheti (Cercozoa), uncultured eukaryote 21339 (Cercozoa), uncultured Cercozoa 54890 (Cercozoa), Gymnophrys sp. (Cercozoa), Cyranomonas australis (Cercozoa), uncultured marine 549447 (Cercozoa), uncultured Rhizaria 551419 (Cercozoa), uncultured Rhizaria 551420 (Cercozoa), uncultured Cercozoa 552740 (Cercozoa), uncultured eukaryote 552759 (Cercozoa), Cyphoderia littoralis (Cercozoa), uncultured eukaryote 552791 (Cercozoa), uncultured eukaryote 552870 (Cercozoa), uncultured marine 553027 (Cercozoa), metagenome (Cercozoa), uncultured Cercozoa 553944 (Cercozoa), uncultured Rhizophlyctis 56246 (Chytridiomycota), Chytridium polysiphoniae (Chytridiomycota), uncultured fungus 550318 (Chytridiomycota), uncultured fungus 548900 (Chytridiomycota), Eutintinnus cf. (Ciliophora), Glauconema trihymene (Ciliophora), metagenome (Ciliophora), Heterohartmannula fangi (Ciliophora), Vaginicola sp. (Ciliophora), uncultured eukaryote 267409 (Ciliophora), Strombidinopsis batos (Ciliophora), Euplotes sp. (Ciliophora), uncultured marine 1815 (Ciliophora), Phialina salinarum (Ciliophora), Paracineta limbata (Ciliophora), Cinetochilum ovale (Ciliophora), Loxophyllum utriculariae (Ciliophora), uncultured eukaryote 552861 (Ciliophora), Pseudokeronopsis carnea (Ciliophora), Protocruzia adherens (Ciliophora), uncultured eukaryote 514669 (Ciliophora), Protogastrostyla sterkii (Ciliophora), uncultured eukaryote 549177 (Ciliophora), Pseudoamphisiella quadrinucleata (Ciliophora), Vampyrophrya pelagica (Ciliophora), uncultured Chytridiomycota 422973 (Cryptomycota), uncultured fungus 7012 (Cryptomycota), uncultured eukaryote 553928 (Cryptomycota), uncultured eukaryote 198850 (Diatomea), Psammodictyon constrictum (Diatomea), Thalassiosira hendeyi (Diatomea), Rhaphoneis sp. (Diatomea), uncultured eukaryote 6222 (Diatomea), uncultured eukaryote 308578 (Diatomea), Odontella aurita (Diatomea), Haslea spicula (Diatomea), uncultured marine 152637 (Diatomea), Haslea ostrearia (Diatomea), Paralia sulcata (Diatomea), uncultured eukaryote 548857 (Diatomea), uncultured stramenopile 142135 (Diatomea), Biddulphia tridens (Diatomea), Pseudogomphonema sp. (Diatomea), Cocconeis cf. (Diatomea), uncultured stramenopile 153550 (Diatomea), uncultured marine 15228 (Diatomea), Navicula arenaria (Diatomea), uncultured marine 152470 (Diatomea), uncultured marine 548912 (Diatomea), Cymatosira belgica (Diatomea), Amphora cf. (Diatomea), uncultured marine 549861 (Diatomea), uncultured eukaryote 549862 (Diatomea), uncultured stramenopile 550312 (Diatomea), uncultured marine 550755 (Diatomea), uncultured marine 550828 (Diatomea), Nitzschia longissima (Diatomea), Craticula pseudocitrus (Diatomea), uncultured eukaryote 52878 (Diatomea), uncultured eukaryote 141758 (Diatomea), Nitzschia sigma (Diatomea), Bacillariophyta sp. (Diatomea), Amphora sp. (Diatomea), Navicula reinhardtii (Diatomea), uncultured marine 549449 (Diatomea), uncultured marine 549546 (Diatomea), Stauroneis kriegeri (Diatomea), Seminavis sp. (Diatomea), Craticula molestiformis (Diatomea), Actinella sp. (Diatomea), Cocconeis stauroneiformis (Diatomea), uncultured marine 552877 (Diatomea), Tabularia fasciculata (Diatomea), uncultured marine 553037 (Diatomea), uncultured marine 553043 (Diatomea), Entomoneis sp. (Diatomea), uncultured eukaryote 354592 (Diatomea), uncultured marine 550875 (Diatomea), Undatella sp. (Diatomea), uncultured marine 551418 (Diatomea), Pseudo-nitzschia pungens (Diatomea), uncultured marine 552756 (Diatomea), Planothidium frequentissimum (Diatomea), uncultured eukaryote 552874 (Diatomea), uncultured marine 552878 (Diatomea), uncultured stramenopile 552918 (Diatomea), uncultured marine 552940 (Diatomea), uncultured Encyonema 552979 (Diatomea), uncultured marine 552986 (Diatomea), uncultured marine 553025 (Diatomea), uncultured marine 553048 (Diatomea), Catenulaceae sp. (Diatomea), uncultured marine 553896 (Diatomea), uncultured eukaryote 206378 (Dinoflagellata), uncultured eukaryote 434933 (Dinoflagellata), Dinophyta sp. (Dinoflagellata), Aduncodinium glandula (Dinoflagellata), Leiocephalium pseudosanguineum (Dinoflagellata), Alexandrium insuetum (Dinoflagellata), Adenoides eludens (Dinoflagellata), Proterythropsis sp. (Dinoflagellata), uncultured eukaryote 550825 (Dinoflagellata), Blastodinium pruvoti (Dinoflagellata), Symbiodinium sp. (Dinoflagellata), uncultured eukaryote 550870 (Dinoflagellata), Pfiesteria-like sp. (Dinoflagellata), uncultured eukaryote 552836 (Dinoflagellata), uncultured eukaryote 552887 (Dinoflagellata), Ostreopsis cf. (Dinoflagellata), uncultured eukaryote 61173 (Dinoflagellata), uncultured eukaryote 203436 (Dinoflagellata), uncultured eukaryote 550121 (Dinoflagellata), uncultured marine 550798 (Dinoflagellata), uncultured eukaryote 551406 (Dinoflagellata), uncultured eukaryote 552869 (Dinoflagellata), Azadinium cuneatum (Dinoflagellata), uncultured eukaryote 553023 (Dinoflagellata), uncultured eukaryote 553908 (Dinoflagellata), uncultured eukaryote 553909 (Dinoflagellata), Notosolenus urceolatus (Euglenozoa), uncultured eukaryote 295877 (Euglenozoa), Neobodo designis (Euglenozoa), uncultured Sphenomonadales 548876 (Euglenozoa), Neobodo saliens (Euglenozoa), uncultured Sphenomonadales 532216 (Euglenozoa), uncultured kinetoplastid 548813 (Euglenozoa), Diplonema sp. (Euglenozoa), Diplonema ambulator (Euglenozoa), Bodonidae sp. (Euglenozoa), uncultured eukaryote 203439 (Euglenozoa), Lolium perenne (Euglenozoa), Rhynchopus sp. (Euglenozoa), Hemistasiidae sp. (Euglenozoa), uncultured Sphenomonadales 552824 (Euglenozoa), Diplonemida sp. (Euglenozoa), Paraphysomonas imperforata (Eukaryota), Symbiochloris sp. (Eukaryota), uncultured marine 1786 (Eukaryota), Dinophyceae sp. (Eukaryota), uncultured stramenopile 268057 (Eukaryota), uncultured eukaryote 549396 (Eukaryota), Pirum gemmata (Eukaryota), uncultured eukaryote 548965 (Eukaryota), Ulvophyceae sp. (Eukaryota), Ulvella viridis (Eukaryota), Paramoeba aestuarina (Eukaryota), Flabellulidae sp. (Eukaryota), uncultured stramenopile 549443 (Eukaryota), Trebouxia sp. (Eukaryota), Ciliophrys infusionum (Eukaryota), Paramoeba atlantica (Eukaryota), uncultured eukaryote 550086 (Eukaryota), uncultured Paraphysomonas 550087 (Eukaryota), uncultured eukaryote 60639 (Eukaryota), uncultured stramenopile 550791 (Eukaryota), uncultured marine 550819 (Eukaryota), Cladophora socialis (Eukaryota), Lessonia variegata (Eukaryota), uncultured eukaryote 532182 (Eukaryota), Acanthamoeba sp. (Eukaryota), Chattonella subsalsa (Eukaryota), Coccomyxa onubensis (Eukaryota), Caulerpa macrodisca (Eukaryota), uncultured stramenopile 550088 (Eukaryota), Paramoeba eilhardi (Eukaryota), Ruthnielsenia tenuis (Eukaryota), Pyramimonas olivacea (Eukaryota), Ulvella repens (Eukaryota), uncultured eukaryote 552843 (Eukaryota), uncultured eukaryote 552884 (Eukaryota), Ulvella ramosa (Eukaryota), Phaeophila dendroides (Eukaryota), uncultured Chlorophyta 706 (Eukaryota), Hazenia basiliensis (Eukaryota), Desmarestia viridis (Eukaryota), Scytosiphon lomentaria (Eukaryota), Creolimax fragrantissima (Eukaryota), uncultured eukaryote 497070 (Eukaryota), uncultured eukaryote 507295 (Eukaryota), Prasinoderma coloniale (Eukaryota), Pycnococcus sp. (Eukaryota), Lychaete ohkuboana (Eukaryota), uncultured eukaryote 550753 (Eukaryota), uncultured stramenopile 550832 (Eukaryota), eukaryotic picoplankton (Eukaryota), uncultured stramenopile 551397 (Eukaryota), Tetraselmis marina (Eukaryota), uncultured eukaryote 552879 (Eukaryota), Ulvella endozoica (Eukaryota), uncultured eukaryote 552937 (Eukaryota), uncultured stramenopile 552983 (Eukaryota), Nannochloris sp. (Eukaryota), uncultured eukaryote 553872 (Eukaryota), uncultured eukaryote 553874 (Eukaryota), uncultured marine 553884 (Eukaryota), Chrysophyceae sp. (Eukaryota), uncultured eukaryote 553891 (Eukaryota), Rhinomonas pauca (Eukaryota), Giraudyopsis stellifera (Eukaryota), Peyssonnelia novae-hollandiae (Florideophycidae), uncultured Corallinales 32421 (Florideophycidae), Melobesioideae sp. (Florideophycidae), Rhodachlya hawaiiana (Florideophycidae), Audouinella dasyae (Florideophycidae), uncultured Corallinales 326013 (Florideophycidae), Polyopes tenuis (Florideophycidae), uncultured eukaryote 548898 (Gastrotricha), Chaetonotus neptuni (Gastrotricha), Chaetonotus mariae (Gastrotricha), uncultured marine 2482 (Labyrinthulomycetes), Aplanochytrium kerguelense (Labyrinthulomycetes), Aplanochytrium stocchinoi (Labyrinthulomycetes), uncultured eukaryote 548686 (Labyrinthulomycetes), uncultured marine 1339 (Labyrinthulomycetes), Ulkenia profunda (Labyrinthulomycetes), uncultured eukaryote 4861 (Labyrinthulomycetes), uncultured eukaryote 72 (Labyrinthulomycetes), uncultured eukaryote 269 (Labyrinthulomycetes), uncultured eukaryote 371 (Labyrinthulomycetes), Labyrinthuloides minuta (Labyrinthulomycetes), uncultured marine 60756 (Labyrinthulomycetes), Thraustochytriidae sp. (Labyrinthulomycetes), uncultured eukaryote 2623 (Labyrinthulomycetes), Thraustochytrium multirudimentale (Labyrinthulomycetes), uncultured eukaryote 1117 (Labyrinthulomycetes), uncultured eukaryote 314880 (Labyrinthulomycetes), uncultured eukaryote 71955 (Labyrinthulomycetes), uncultured eukaryote 1233 (Labyrinthulomycetes), Aplanochytrium blankum (Labyrinthulomycetes), uncultured eukaryote 19816 (Labyrinthulomycetes), Oblongichytrium sp. (Labyrinthulomycetes), uncultured eukaryote 550847 (Labyrinthulomycetes), Stellarchytrium dubum (Labyrinthulomycetes), Thraustochytrium pachydermum (Labyrinthulomycetes), uncultured eukaryote 66634 (Labyrinthulomycetes), uncultured stramenopile 550786 (Labyrinthulomycetes), uncultured eukaryote 1294 (Labyrinthulomycetes), uncultured eukaryote 4942 (Labyrinthulomycetes), uncultured eukaryote 37874 (Labyrinthulomycetes), uncultured eukaryote 111727 (Labyrinthulomycetes), uncultured eukaryote 429522 (Labyrinthulomycetes), Aplanochytrium sp. (Labyrinthulomycetes), Thraustochytrium sp. (Labyrinthulomycetes), uncultured marine 552835 (Labyrinthulomycetes), uncultured eukaryote 552897 (Labyrinthulomycetes), Pseudophyllomitus vesiculosus (MAST-6), eukaryote marine (MAST-6), Xyzzors sp. (Nematozoa), Nematoda environmental (Nematozoa), Restionaceae environmental (Phragmoplastophyta), Mida salicifolia (Phragmoplastophyta), Setaria italica (Phragmoplastophyta), uncultured marine 268951 (Protalveolata), Chromera velia (Protalveolata), uncultured eukaryote 552838 (Protalveolata), uncultured eukaryote 553948 (Protalveolata), Styela gibbsii (Tunicata), Botryllus schlosseri (Tunicata), Boltenia villosa (Tunicata), Polycarpa mytiligera (Tunicata), Chromerida sp. (uncultured), uncultured eukaryote 550111 (uncultured), uncultured marine 249352 (uncultured)

Complete List of Microbes Identified

This list includes all microbes (Bacteria & Archae) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Nitrosopumilus sp., Mycobacterium sp., Unclassified Bacteria 1800, Unclassified Bacteria 195182, Unclassified Piscirickettsiaceae 1975, Microbulbifer sp., Photobacterium angustum, Unclassified Bacteria 26049, Unclassified Pirellulaceae 14949, Unclassified Bacteria 791, Unclassified Bacteria 10020, Unclassified Bacteria 2094, Unclassified Bacteria 9129, Unclassified Bacteria 126911, Unclassified Bacteria 362840, Unclassified Bacteria 81476, Unclassified Piscirickettsiaceae 270653, Unclassified Bacteria 9721, Desulfococcus sp., Unclassified Bacteria 14517, Unclassified Clostridiaceae 1377, Unclassified Bacteria 346159, Unclassified Cenarchaeaceae 31722, Unclassified Bacteria 189199, Unclassified Hyphomicrobiaceae 253025, Unclassified Coxiellaceae 359934, Unclassified Peptostreptococcaceae 41166, Unclassified Bacteria 99527, Epulopiscium sp., Unclassified Hyphomicrobiaceae 1489, Unclassified Lachnospiraceae 12815, Unclassified Bacteria 68430, Nocardia sp., Unclassified koll13 40437, Clostridium sp., Unclassified Bacteria 55116, Unclassified Hyphomicrobiaceae 9813, Bacillus sp., Unclassified Lachnospiraceae 220739, Xenococcus sp., Tepidibacter sp., Unclassified Xenococcaceae 220470, Vibrio sp., Unclassified Legionellaceae 93683, Unclassified Bacteria 99471, Unclassified Lachnospiraceae 67609, Unclassified Bacteria 17915, Unclassified Bacteria 195054, Unclassified Pirellulaceae 362988, Unclassified Bacteria 362989, Unclassified Hyphomicrobiaceae 273, Unclassified Bacteria 62060, Synechococcus sp., Unclassified Bacteria 189176, Unclassified Pirellulaceae 363010, Unclassified Pirellulaceae 25806, Unclassified Nitrospiraceae 55498, Unclassified Pirellulaceae 81282, Unclassified [Amoebophilaceae] 93818, Unclassified Bacteria 235842, Unclassified Bacteria 87892, Unclassified Legionellaceae 363028, Amphritea sp., Unclassified Cohaesibacteraceae 26164, Unclassified Bacteria 81096, Unclassified Bacteria 363044, Unclassified Peptostreptococcaceae 253101, Unclassified Hyphomicrobiaceae 286, Unclassified Pirellulaceae 11597, Thalassomonas sp., Unclassified Bacteria 363081, Alteromonas sp., Unclassified Bacteria 249, Unclassified Rhodobacteraceae 1192, Unclassified Coxiellaceae 9755, Unclassified Clostridiaceae 64305, Unclassified Bacteria 253202, Unclassified Pirellulaceae 363093, Unclassified Hyphomicrobiaceae 27524, Unclassified Pirellulaceae 32974, Unclassified Flammeovirgaceae 363110, Unclassified Bacteria 363116, A17 sp., Unclassified Flammeovirgaceae 88338, Unclassified Bacteria 36764, Unclassified Bacteria 248383, Unclassified Bacteria 363157, Unclassified Criblamydiaceae 363163, Unclassified Bacteria 10830, Unclassified Peptostreptococcaceae 290953, Unclassified Clostridiaceae 292655, Unclassified Pirellulaceae 363184, Unclassified Hyphomicrobiaceae 363217, Verrucomicrobium sp., Unclassified Bacteria 132073, Unclassified Flavobacteriaceae 248663, Unclassified Pirellulaceae 363247, Unclassified Bacillaceae 4656, Unclassified Bacteria 126931, Unclassified Coxiellaceae 172750, Unclassified Xenococcaceae 346474, Phaeobacter sp., Ucs1325 sp., Unclassified Bacteria 363298, Unclassified Bacteria 4294, Unclassified Desulfobacteraceae 27376, Unclassified Flavobacteriaceae 33271, Cenarchaeum symbiosum, Unclassified Bacteria 112750, Unclassified Xenococcaceae 132144, Clostridiisalibacter sp., Unclassified Saprospiraceae 363335, Unclassified Bacteria 2256, Clostridium perfringens, Unclassified Bacteria 81817, Unclassified Bacteria 109107, Unclassified Flavobacteriaceae 363383, Unclassified Bacteria 363385, Unclassified Bacteria 363398, Unclassified NB1-i 363399, Unclassified Bacteria 542, Unclassified Nitrosomonadaceae 2057, Cobetia sp., Unclassified Rhodobacteraceae 11201, Unclassified Pirellulaceae 58353, Unclassified Bacteria 90672, Unclassified Clostridiaceae 191515, Unclassified Bacteria 245978, Rhodobacter sp., Paenibacillus sp., Unclassified JdFBGBact 4770, Unclassified Hyphomicrobiaceae 10456, Unclassified Bacteria 207798, Unclassified Pirellulaceae 363531, Inquilinus sp., Unclassified Legionellaceae 363550, nsmpVI18 sp., Unclassified Bacteria 366, Unclassified wb1_P06 102604, Unclassified Rhodospirillaceae 253488, Unclassified Bacteria 363631, Unclassified Rhodospirillaceae 363632, Unclassified Lachnospiraceae 363653, Unclassified Oceanospirillaceae 1145, Unclassified Phycisphaeraceae 25388, Unclassified Ectothiorhodospiraceae 140623, Unclassified Saprospiraceae 195212, Unclassified Bacteria 220341, Unclassified Bacteria 222335, Unclassified Microbacteriaceae 238763, Unclassified Pirellulaceae 363744, Unclassified Verrucomicrobiaceae 363747, Unclassified Sinobacteraceae 858, Unclassified Bacteria 11063, Unclassified Nitrospiraceae 25423, Unclassified Pirellulaceae 27973, Unclassified Bacteria 113798, Unclassified Bacteria 220365, Unclassified Pirellulaceae 248125, Unclassified JTB38 363914, Unclassified Pirellulaceae 363943, Unclassified Bacteria 363945, Unclassified Lachnospiraceae 363947, Propionigenium sp., Unclassified Piscirickettsiaceae 10337, Unclassified Pirellulaceae 12597, Unclassified Piscirickettsiaceae 26077, Planctomyces sp., Unclassified Pirellulaceae 235686, Unclassified Rhodospirillaceae 265618, Unclassified Xenococcaceae 346235, Unclassified Bacteria 364090, Unclassified Piscirickettsiaceae 364092, Unclassified Ectothiorhodospiraceae 364097, Cyanobacterium sp., Unclassified Chromatiaceae 364141, Unclassified Legionellaceae 117161, Unclassified Pirellulaceae 124686, Unclassified Rhodothermaceae 160931, Unclassified Piscirickettsiaceae 189758, Unclassified Pirellulaceae 364356, Unclassified Criblamydiaceae 364413, Unclassified Clostridiaceae 364417, Marinicella sp., Candidatus sp., Unclassified mitochondria 4445, Yersinia sp., Unclassified Bacteria 36352, Unclassified Nitrosomonadaceae 104582, Hyphomicrobium sp., Unclassified Coxiellaceae 241565, Unclassified Lachnospiraceae 261034, Unclassified Pirellulaceae 364692, Unclassified Pirellulaceae 364693, Unclassified Flammeovirgaceae 364702, Unclassified Flammeovirgaceae 364703, Unclassified Bacteria 54750, Unclassified Bacteria 131732, LCP-26 sp., Unclassified Bacteria 223904, Unclassified Bacteria 358800, Unclassified Nitrospiraceae 365137, Unclassified Rhodospirillaceae 365263, Bdellovibrio sp., Unclassified Bacteria 365270, Paracoccus sp., Unclassified Criblamydiaceae 365276, Unclassified Bacteria 96705, Unclassified Bacteria 230702, Unclassified Pirellulaceae 256348, Unclassified SJA-101 365819, Unclassified Pirellulaceae 365820, Unclassified Pirellulaceae 365825, Unclassified Bacteria 365983, Unclassified Desulfobulbaceae 365992, Acinetobacter sp., Unclassified Rhodocyclaceae 183995, Unclassified Flammeovirgaceae 253123, Unclassified Pirellulaceae 366870, Unclassified Piscirickettsiaceae 366884, Unclassified Piscirickettsiaceae 366885, Unclassified JTB38 366892, Unclassified Pirellulaceae 367129, Unclassified Bacteria 367142, Unclassified Coxiellaceae 367145, Unclassified Coxiellaceae 367147, Unclassified Coxiellaceae 367148, Unclassified Pirellulaceae 367150, Unclassified Criblamydiaceae 367156, Unclassified Syntrophobacteraceae 367157, Francisella sp., Unclassified Bacteria 367164, Corynebacterium sp., Unclassified Bacteria 11828, Unclassified Bacteroidaceae 62462, Unclassified Bacteria 91813, Unclassified Bacteria 195771, Unclassified Bacteria 221988, Unclassified Bacteria 280070, Unclassified Bacteria 368701, Unclassified Pirellulaceae 368703, Unclassified Pirellulaceae 368704, Unclassified Pirellulaceae 368710, Unclassified Pirellulaceae 368719, Unclassified Rhodospirillaceae 368725, Unclassified Piscirickettsiaceae 368728, Unclassified Piscirickettsiaceae 368729, Unclassified Piscirickettsiaceae 368732, Unclassified Piscirickettsiaceae 368734, Unclassified Piscirickettsiaceae 368745, Unclassified Legionellaceae 369206, Unclassified Desulfobacteraceae 369211, Unclassified Clostridiaceae 369214, Unclassified Lachnospiraceae 369215, Unclassified Peptostreptococcaceae 369218, Unclassified Caldilineaceae 369220, Unclassified Bacteria 369222, Unclassified Rhodobacteraceae 61807, Unclassified Syntrophobacteraceae 117208, Unclassified Bacteria 143322, Unclassified Hyphomicrobiaceae 165088, Unclassified Bacteria 209218, Unclassified Pirellulaceae 243237, Unclassified Hyphomicrobiaceae 254336, Unclassified Bacteria 315026, Unclassified Hyphomicrobiaceae 367381, Unclassified Pirellulaceae 372255, Unclassified wb1_P06 372266, Unclassified JdFBGBact 372267, Unclassified koll13 372268, Unclassified Pirellulaceae 372270, Unclassified Pirellulaceae 372271, Unclassified Pirellulaceae 372272, Unclassified Pirellulaceae 372274, Unclassified Bacteria 372277, Unclassified Bacteria 372278, Unclassified Piscirickettsiaceae 372280, Unclassified Pirellulaceae 372287, Unclassified Flavobacteriaceae 372293, Unclassified Flavobacteriaceae 372294, Unclassified Bacteria 372295, Unclassified Bacteria 372300, Unclassified koll13 372306, Unclassified Bacteria 372308, Unclassified Rhodospirillaceae 372309, Unclassified koll13 372310, Unclassified Piscirickettsiaceae 372322, Unclassified Piscirickettsiaceae 372323, Unclassified Piscirickettsiaceae 372324, Unclassified Bacteria 372326, Unclassified Flavobacteriaceae 372327, Unclassified Flammeovirgaceae 372328, Unclassified JTB38 372332, Unclassified Piscirickettsiaceae 372335, Unclassified Piscirickettsiaceae 372336, Unclassified koll13 372342, Unclassified Ectothiorhodospiraceae 372345, Unclassified Pirellulaceae 373070, Unclassified Pirellulaceae 373072, Unclassified Pirellulaceae 373077, Unclassified Pirellulaceae 373079, Unclassified Bacteria 373082, Unclassified Bacteria 373084, Unclassified Coxiellaceae 373090, Unclassified Legionellaceae 373092, Unclassified Coxiellaceae 373093, Unclassified Pirellulaceae 373096, Unclassified Hyphomicrobiaceae 373097, Unclassified Bacteria 373100, Unclassified Bacteria 373104, Unclassified Bacteria 373105, Unclassified Hyphomicrobiaceae 373107, Unclassified Hyphomicrobiaceae 373108, Unclassified Bacteria 373109, Unclassified Criblamydiaceae 373112, Unclassified Ectothiorhodospiraceae 373119, Unclassified Bacteria 373124, Microbulbifer elongatus, Unclassified Bacteria 373126, Unclassified Desulfobacteraceae 373128, Unclassified Microbacteriaceae 373132, Unclassified Bacillaceae 373134, Unclassified Bacillaceae 373135, Unclassified Clostridiaceae 373137, Unclassified Peptostreptococcaceae 373140, Unclassified Bacteria 373142, Unclassified Hyphomicrobiaceae 373149


DNA analysis conducted by AquaBiomics LLC.

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Certificate of Analysis LRS G11.2

Certificate of Analysis: Live Reef Sand, Batch LRS G11.2

lrs.g11.2_Certificate_of_Analysis

    Certificate of Analysis



About this report

This report summarizes the results from DNA analysis of the community growing in a batch of Live Reef Sand. Universal genetic markers were amplified from microbial (prokaryotic) and other (eukaryotic) DNA in the sample, and thousands of individual DNA molecules from this mixture were sequenced. Each sequence was then compared with public DNA databases to identify its origin. This report summarizes the kinds of organisms detected in the sample, with a focus on beneficial microbes, pathogens, and parasites.

Information about this sample

Sample ID lrs.g11.2
Batch Name g12-15-25
Sample Date 1/16/26 10:00 AM

Microbial Diversity

This sample contained DNA from 473 different types of microbes.


This pie chart shows the diversity of each microbial family found in the sample. The size of each slice is proportional to the number of different types (labels on each slice). For clarity, only families with 2 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Nitrifying Community

Ammonia-Oxidizing Microbes

Nitrosomonadaceae
Type Percent of Community Genus Species
58445 0.35 Unknown Unknown
Cenarchaeaceae
Type Percent of Community Genus Species
73 0.92 Nitrosopumilus Unknown
29969 0.63 Unknown Unknown
2996 0.19 Nitrosopumilus Unknown
248127 0.18 Unknown Unknown
74696 0.11 Cenarchaeum symbiosum

Nitrite-Oxidizing Bacteria

Nitrospiraceae
Type Percent of Community Genus Species
9977 0.01 Unknown Unknown
The nitrifying community in this sample included 7 different types of microbes.

Bacterial Pathogens

None found.

Complete list of pathogens we screened for:

Eubacterium tarantellae, Lactococcus garvieae, Enterococcus seriolicida, Streptococcus parauberis, Streptococcus iniae, Mycobacterium chelonei, Mycobacterium fortuitum, Mycobacterium marinum, Mycobacterium neoaurum, Nocardia asteroides, Nocardia salmonicida, Nocardia seriolae, Renibacterium salmoninarum, Aeromonas jandaei, Aeromonas salmonicida, Serratia liquefaciens, Chryseobacterium balustinum, Chryseobacterium scophthalmum, Tenacibaculum maritimus, Tenacibaculum ovolyticus, Pasteurella skyensis, Pseudomonas anguilliseptica, Moritella marina, Moritella viscosa, Photobacterium damselae, Shewanella putrefaciens, Vibrio alginolyticus, Vibrio cholerae, Vibrio fischeri, Vibrio furnissii, Vibrio harveyi, Vibrio carchariae, Vibrio trachuri, Vibrio ichthyoenteri, Vibrio logei, Vibrio ordalii, Vibrio pelagius, Vibrio salmonicida, Vibrio splendidus, Halomonas cupida, Piscirickettsia salmonis, Vibrio shiloi, Vibrio coralliilyticus, Vibrio harveyi, Aurantimonas coralicida, Vibrio rotiferianus, Vibrio alginolyticus, Vibrio proteolyticus, Vibrio charcharvina, Serratia marscesens, Aquarickettsia rohweri

Eukaryotic Biodiversity

This sample contained DNA from 900 different Eukaryotic sources.


This pie chart shows the diversity of each Eukaryotic Phylum detected in the sample. The size of each slice is proportional to the number of different types from each phylum. For clarity, only families with 3 or more types are shown here. Unidentified sequences lacking any match in public databases are not shown.

Parasites

None of the DNA sequences from this sample matched known parasites.
Group Description Percent of eDNA
Amyloodinium Dinoflagellate parasites responsible for the fish disease Marine Velvet 0
Cryptocaryon Ciliate parasites responsible for the fish disease Ich 0
Brooklynella Ciliate parasites responsible for the fish disease Brook 0
Uronema Ciliate parasites responsible for a fish disease called by the same name 0
Phestilla Montipora-eating Nudibranchs 0
Amakusaplana Acropora-eating Flatworms 0
Ancyrocephalidae Flatworms often called Flukes that parasitize fish 0
Gyrodactylidae Flatworms often called Flukes that parasitize fish 0
Capsalidae Flatworms often called Flukes that parasitize fish 0
Turbonilla Snails in the family Pyramidellidae that parasitize giant clams 0
Trichodina A ciliated protozoan parasite of fish 0

Other Animal Pests

None of the DNA sequences from this sample matched known animal pests.
Group Description Percent of eDNA
Aiptasia The glass anemone, a ubiquitous pest 0
Thylacodes Vermetid snails 0
Asterina A group of sea stars that includes coral predators 0

Complete list of Eukaryotes identified

This list includes all Eukaryotes (Animals, Protists, and anything else besides Bacteria or Archaea) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Chitinopoma serrula (Annelida), Novafabricia sp. (Annelida), Paranerilla limicola (Annelida), Nenesidea oligodentata (Arthropoda), Coquimba ishizakii (Arthropoda), Agauopsis legionium (Arthropoda), Robustaurila salebrosa (Arthropoda), Sellea sp. (Arthropoda), Saccharum hybrid (Arthropoda), Artemia salina (Arthropoda), uncultured eukaryote 542594 (Arthropoda), Pseudanaphothrips achaetus (Arthropoda), Aspergillus cristatus (Ascomycota), Stagonosporopsis cucurbitacearum (Ascomycota), Humulus lupulus (Ascomycota), Graminopassalora graminis (Ascomycota), Aspergillus amstelodami (Ascomycota), Wallemia sebi (Basidiomycota), Postia placenta (Basidiomycota), Psathyrella candolleana (Basidiomycota), Cryptococcus sp. (Basidiomycota), Filobasidium floriforme (Basidiomycota), Goffeauzyma gastrica (Basidiomycota), metagenome (Centrohelida), Paradinium poucheti (Cercozoa), uncultured marine 15485 (Cercozoa), Gromia oviformis (Cercozoa), uncultured eukaryote 2529 (Cercozoa), uncultured Cercozoa 54890 (Cercozoa), Protaspis grandis (Cercozoa), Reckertia gemma (Cercozoa), Protaspis sp. (Cercozoa), uncultured marine 60804 (Cercozoa), Ventrifissura sp. (Cercozoa), uncultured eukaryote 541785 (Cercozoa), marine metagenome (Cercozoa), uncultured marine 541812 (Cercozoa), Vampyrellida sp. (Cercozoa), Ventrifissura artocarpoidea (Cercozoa), uncultured eukaryote 542140 (Cercozoa), uncultured marine 425196 (Cercozoa), uncultured Cercozoa 542384 (Cercozoa), metagenome (Cercozoa), Metanophrys sinensis (Ciliophora), Moneuplotes minuta (Ciliophora), Heterohartmannula fangi (Ciliophora), Paracineta limbata (Ciliophora), Loxophyllum shini (Ciliophora), Euplotes euryhalinus (Ciliophora), Stichotricha aculeata (Ciliophora), Diophrys oligothrix (Ciliophora), Holosticha diademata (Ciliophora), Diophrys parappendiculata (Ciliophora), Amphileptus spiculatus (Ciliophora), Cothurnia salina (Ciliophora), Euplotes rariseta (Ciliophora), Holosticha heterofoissneri (Ciliophora), uncultured eukaryote 542028 (Ciliophora), uncultured ciliate 2052 (Ciliophora), Glauconema trihymene (Ciliophora), Vorticella oceanica (Ciliophora), Amphileptus litonotiformis (Ciliophora), Pseudovorticella paracratera (Ciliophora), uncultured alveolate 60809 (Ciliophora), Stichotrichia sp. (Ciliophora), Sathrophilus holtae (Ciliophora), Platynematum salinarum (Ciliophora), Omegastrombidium elegans (Ciliophora), Uronychia setigera (Ciliophora), Euplotes sp. (Ciliophora), Aristerostoma sp. (Ciliophora), Dysteria pectinata (Ciliophora), Protogastrostyla pulchra (Ciliophora), uncultured ciliate 245931 (Ciliophora), Varistrombidium kielum (Ciliophora), Thigmokeronopsis sp. (Ciliophora), Phyllangia mouchezii (Cnidaria), Mycetophyllia daniana (Cnidaria), Pachyseris speciosa (Cnidaria), Astrangia poculata (Cnidaria), Xenia sp. (Cnidaria), uncultured eukaryote 6222 (Diatomea), Halamphora subtropica (Diatomea), uncultured marine 541685 (Diatomea), Pleurosigma sp. (Diatomea), uncultured marine 472638 (Diatomea), Licmophora sp. (Diatomea), Psammodictyon constrictum (Diatomea), Haslea spicula (Diatomea), uncultured marine 541667 (Diatomea), Entomoneis ornata (Diatomea), uncultured marine 541909 (Diatomea), uncultured marine 166879 (Diatomea), Licmophora juergensii (Diatomea), Convoluta convoluta (Diatomea), Haslea ostrearia (Diatomea), Craticula pseudocitrus (Diatomea), Navicula arenaria (Diatomea), uncultured marine 543231 (Diatomea), Sellaphora pupula (Diatomea), Halamphora costata (Diatomea), Eolimna minima (Diatomea), uncultured eukaryote 543324 (Diatomea), Sellaphora sp. (Diatomea), uncultured marine 152470 (Diatomea), Cocconeis placentula (Diatomea), Pfiesteria-like sp. (Dinoflagellata), Symbiodinium sp. (Dinoflagellata), Symbiodinium microadriaticum (Dinoflagellata), Ostreopsis cf. (Dinoflagellata), uncultured eukaryote 50575 (Dinoflagellata), uncultured eukaryote 407479 (Dinoflagellata), uncultured eukaryote 543241 (Dinoflagellata), Amphidinium sp. (Dinoflagellata), Prorocentrum arenarium (Dinoflagellata), uncultured eukaryote 203436 (Dinoflagellata), uncultured eukaryote 295341 (Dinoflagellata), Symbiodinium minutum (Dinoflagellata), uncultured eukaryote 542387 (Dinoflagellata), Dinophyta sp. (Dinoflagellata), Diplonema sp. (Euglenozoa), uncultured eukaryote 17870 (Euglenozoa), Diplonemida sp. (Euglenozoa), uncultured kinetoplastid 13113 (Euglenozoa), Hemistasiidae sp. (Euglenozoa), Notosolenus urceolatus (Euglenozoa), uncultured eukaryote 541798 (Euglenozoa), Neobodo designis (Euglenozoa), Bodonidae sp. (Euglenozoa), uncultured eukaryote 542293 (Euglenozoa), Rhynchomonas nasuta (Euglenozoa), Klosteria bodomorphis (Euglenozoa), Kinetoplastida sp. (Euglenozoa), uncultured eukaryote 291943 (Euglenozoa), Rhynchopus sp. (Euglenozoa), uncultured eukaryote 32619 (Eukaryota), Paraphysomonas imperforata (Eukaryota), Phaeophila dendroides (Eukaryota), uncultured eukaryote 541736 (Eukaryota), Paramoeba branchiphila (Eukaryota), eukaryote clone (Eukaryota), uncultured eukaryote 1494 (Eukaryota), Ulvophyceae sp. (Eukaryota), Ciliophrys infusionum (Eukaryota), Vannella sp. (Eukaryota), uncultured eukaryote 541928 (Eukaryota), Rhodomonas abbreviata (Eukaryota), uncultured eukaryote 541866 (Eukaryota), Hazenia basiliensis (Eukaryota), Ulvella viridis (Eukaryota), Amphibiocystidium ranae (Eukaryota), Picochlorum eukaryotum (Eukaryota), uncultured stramenopile 542091 (Eukaryota), uncultured eukaryote 543226 (Eukaryota), Pseudulvella consociata (Eukaryota), Rhinomonas pauca (Eukaryota), uncultured marine 543286 (Eukaryota), Scytosiphon lomentaria (Eukaryota), Anurofeca richardsi (Eukaryota), uncultured eukaryote 541893 (Eukaryota), uncultured stramenopile 541927 (Eukaryota), Carinoma tremaphoros (Eukaryota), uncultured eukaryote 542380 (Eukaryota), uncultured eukaryote 542591 (Eukaryota), uncultured eukaryote 542610 (Eukaryota), Rhodomonas marina (Eukaryota), Rhodomonas sp. (Eukaryota), Anurofeca sp. (Eukaryota), metagenome (Eukaryota), uncultured eukaryote 542906 (Eukaryota), Tetraselmis sp. (Eukaryota), uncultured stramenopile 542919 (Eukaryota), Rhodopeltis borealis (Florideophycidae), uncultured Corallinales 152450 (Florideophycidae), Lithophyllum cf. (Florideophycidae), uncultured Corallinales 32421 (Florideophycidae), uncultured Corallinales 21317 (Florideophycidae), uncultured Corallinales 1433 (Florideophycidae), Peyssonnelia novae-hollandiae (Florideophycidae), Dichotomaria marginata (Florideophycidae), Naccaria wiggii (Florideophycidae), Polyopes tenuis (Florideophycidae), Melobesioideae sp. (Florideophycidae), Peyssonnelia capensis (Florideophycidae), Cordylecladia erecta (Florideophycidae), uncultured Corallinales 324879 (Florideophycidae), Renouxia sp. (Florideophycidae), Hapalidiaceae sp. (Florideophycidae), Corallinales sp. (Florideophycidae), Bonnemaisonia asparagoides (Florideophycidae), uncultured Corallinales 32614 (Florideophycidae), Gastroclonium pacificum (Florideophycidae), uncultured Corallinales 326013 (Florideophycidae), uncultured Corallinales 363979 (Florideophycidae), uncultured Corallinales 364950 (Florideophycidae), uncultured Corallinales 541886 (Florideophycidae), Weeksia coccinea (Florideophycidae), uncultured Corallinales 542500 (Florideophycidae), Audouinella dasyae (Florideophycidae), Spyridia dasyoides (Florideophycidae), Polyides rotundus (Florideophycidae), Schmitzia sp. (Florideophycidae), uncultured Corallinales 543306 (Florideophycidae), uncultured eukaryote 543307 (Florideophycidae), uncultured eukaryote 543309 (Florideophycidae), uncultured Corallinales 543310 (Florideophycidae), Prionitis lyallii (Florideophycidae), uncultured Corallinales 543312 (Florideophycidae), uncultured Corallinales 543315 (Florideophycidae), uncultured Corallinales 543316 (Florideophycidae), Hymenocladiopsis prolifera (Florideophycidae), Lithophyllum pustulatum (Florideophycidae), uncultured Corallinales 542633 (Florideophycidae), Chaetonotus neptuni (Gastrotricha), Chaetonotus sp. (Gastrotricha), Oblongichytrium sp. (Labyrinthulomycetes), uncultured eukaryote 72 (Labyrinthulomycetes), Schizochytrium minutum (Labyrinthulomycetes), Thraustochytrium multirudimentale (Labyrinthulomycetes), uncultured eukaryote 4861 (Labyrinthulomycetes), Thraustochytrium pachydermum (Labyrinthulomycetes), Labyrinthuloides minuta (Labyrinthulomycetes), Stellarchytrium dubum (Labyrinthulomycetes), uncultured marine 1339 (Labyrinthulomycetes), Thraustochytriidae sp. (Labyrinthulomycetes), uncultured stramenopile 21358 (Labyrinthulomycetes), uncultured eukaryote 47361 (Labyrinthulomycetes), uncultured eukaryote 67219 (Labyrinthulomycetes), uncultured eukaryote 1117 (Labyrinthulomycetes), Thraustochytrium sp. (Labyrinthulomycetes), uncultured eukaryote 402669 (Labyrinthulomycetes), uncultured eukaryote 541985 (Labyrinthulomycetes), uncultured marine 543212 (Labyrinthulomycetes), Aplanochytrium sp. (Labyrinthulomycetes), uncultured eukaryote 4141 (Labyrinthulomycetes), uncultured eukaryote 5115 (Labyrinthulomycetes), uncultured eukaryote 408039 (Labyrinthulomycetes), Ulkenia profunda (Labyrinthulomycetes), Haliphthoros sp. (Peronosporomycetes), Olpidiopsis sp. (Peronosporomycetes), Halodaphnea panulirata (Peronosporomycetes), uncultured stramenopile 542376 (Peronosporomycetes), uncultured stramenopile 542619 (Peronosporomycetes), Leuconia nivea (Porifera), Leucetta sp. (Porifera), Grantiopsis heroni (Porifera), Spirastrella sp. (Porifera), Clathrina luteoculcitella (Porifera), Aphroceras sp. (Porifera), Eilhardia schulzei (Porifera), Clathrina sp. (Porifera), Ernstia adusta (Porifera), Leucaltis clathria (Porifera), Murrayona phanolepis (Porifera), uncultured eukaryote 135208 (Protalveolata), uncultured eukaryote 541706 (Protalveolata), uncultured eukaryote 32469 (Protalveolata), uncultured marine 268951 (Protalveolata), uncultured eukaryote 66827 (Protalveolata), uncultured eukaryote 543277 (Protalveolata), uncultured eukaryote 52921 (Protalveolata), uncultured eukaryote 542285 (Protalveolata), uncultured eukaryote 542615 (Protalveolata), uncultured eukaryote 1004 (uncultured), uncultured eukaryote 1059 (uncultured), uncultured eukaryote 542092 (uncultured), uncultured eukaryote 542637 (uncultured)

Complete List of Microbes Identified

This list includes all microbes (Bacteria & Archae) that were detected in the sample and identified based on comparison with public DNA sequence databases. DNA sequences that lacked any matches in public datases could not be identified, and are not shown here. The list is sorted by abundance, from highest to lowest.

Unclassified Desulfovibrionaceae 96, Photobacterium angustum, Unclassified Coxiellaceae 2257, Unclassified Hyphomicrobiaceae 1489, Curtobacterium sp., Clostridium sp., Unclassified Marinilabiaceae 358310, Unclassified Bacteria 171772, Microbulbifer sp., Nitrosopumilus sp., Unclassified Hyphomicrobiaceae 273, Staphylococcus aureus, Unclassified Oleiphilaceae 67653, Unclassified Bacteria 195182, Unclassified Bacteria 9721, Arcobacter sp., Unclassified Bacteria 11774, Unclassified Bacteria 67693, Unclassified Cenarchaeaceae 29969, Unclassified Bacteria 58502, Crocinitomix sp., Desulfofrigus sp., Rhodovulum sp., Unclassified Alteromonadaceae 25663, Unclassified Kordiimonadaceae 336106, Unclassified [Amoebophilaceae] 1322, Unclassified Micrococcaceae 154917, Pseudoalteromonas sp., Unclassified Alteromonadaceae 16245, Unclassified Lentisphaeraceae 15113, Unclassified Phyllobacteriaceae 9876, Unclassified Lentisphaeraceae 1218, Olleya sp., Hirschia baltica, Unclassified Bacteria 233516, Unclassified Rhodobacteraceae 41, Unclassified Nitrosomonadaceae 58445, Unclassified Bacteria 62060, Unclassified Vibrionaceae 166, Candidatus sp., Unclassified Bacteria 128, Unclassified Hyphomicrobiaceae 104, Unclassified Hyphomicrobiaceae 3790, Unclassified Vibrionaceae 58111, Unclassified Flavobacteriaceae 328, HTCC sp., Unclassified Legionellaceae 11183, Mycobacterium sp., BD2-13 sp., Unclassified Bacteria 30, Unclassified Bacteria 994, Pelagicoccus sp., Unclassified Colwelliaceae 164283, Unclassified Alteromonadaceae 358342, Unclassified Bacteria 319159, Unclassified Alteromonadaceae 10024, Unclassified Bacteria 4091, Bdellovibrio sp., Unclassified Pirellulaceae 109572, Amphritea sp., Unclassified Bacteria 106413, Unclassified Bacteria 358323, Unclassified Coxiellaceae 66758, Unclassified Bacteria 358354, Unclassified Colwelliaceae 102236, Unclassified Rhodospirillaceae 122953, Unclassified Bacteria 10172, Unclassified Coxiellaceae 358361, Unclassified Bacteria 358362, Desulfovibrio sp., Planctomyces sp., Unclassified Victivallaceae 358364, Tenacibaculum sp., Unclassified Phyllobacteriaceae 1520, Unclassified Oleiphilaceae 2222, Unclassified Colwelliaceae 50492, Oleibacter sp., Unclassified Cenarchaeaceae 248127, Unclassified Legionellaceae 309248, Unclassified Clostridiaceae 358372, Unclassified Pelagibacteraceae 1, Unclassified Bacteriovoracaceae 358374, Caldanaerocella sp., Unclassified Colwelliaceae 358382, Propionigenium sp., Francisella sp., Hyphomicrobium zavarzinii, Coraliomargarita sp., Desulfococcus sp., Clostridiisalibacter sp., Unclassified Methylophilaceae 392, Plesiocystis sp., Unclassified Bacteria 18392, Unclassified Saprospiraceae 46810, Kocuria sp., Hyphomicrobium sp., Halomonas sp., Unclassified Hyphomicrobiaceae 9813, Unclassified Bacteria 949, Unclassified Hyphomicrobiaceae 2139, Unclassified Bacteria 2152, Unclassified Rhodospirillaceae 56010, Fusibacter sp., Unclassified Pirellulaceae 977, Unclassified Oceanospirillaceae 24958, Unclassified Bacteria 81096, Unclassified Bacteria 340180, Unclassified Bacteria 4793, Unclassified Saprospiraceae 6824, Devosia sp., Unclassified Bacteria 213686, Unclassified Bacteria 36756, Cenarchaeum symbiosum, Unclassified Pirellulaceae 137577, Unclassified JTB36 186605, Unclassified Rhodospirillaceae 27702, Tepidibacter sp., Unclassified Oleiphilaceae 358415, Unclassified Flavobacteriaceae 358428, Unclassified Bacteria 345, Ucs1325 sp., Unclassified [Marinicellaceae] 31880, Unclassified Bacteria 235576, Spirochaeta sp., Unclassified Bacteria 2629, Unclassified Bacteria 6853, Thalassospira sp., Neptunomonas sp., Inquilinus sp., Unclassified Bacteria 190350, Unclassified [Amoebophilaceae] 358451, Cobetia sp., Unclassified Flavobacteriaceae 58290, Glaciecola sp., Unclassified Chitinophagaceae 1434, Unclassified Bacteria 2492, Polaribacter sp., Unclassified Bacteria 72622, Sulfurimonas sp., Unclassified Hyphomonadaceae 290, Methylobacterium sp., Unclassified Bacteria 4372, Unclassified Bacteria 68755, Unclassified Bacteria 84524, Unclassified Hyphomonadaceae 112803, Unclassified Pirellulaceae 358534, Unclassified Lachnospiraceae 358537, Unclassified Bacteria 1347, Finegoldia sp., Unclassified Caulobacteraceae 5440, Aquarickettsia rohweri, Unclassified Bacteria 27890, Unclassified NS11-12 76843, Unclassified Bacteria 358558, Unclassified Bacteria 358560, Unclassified Bacteria 358561, Unclassified Oceanospirillaceae 1096, Agarivorans sp., Unclassified Alteromonadaceae 358600, Achromobacter sp., Unclassified Bacteria 4991, Unclassified Bacteria 7594, Unclassified Bacteria 129144, Unclassified Bacteria 358629, Unclassified Alteromonadaceae 358630, Unclassified Oleiphilaceae 358632, Unclassified Alteromonadaceae 358633, Unclassified [Amoebophilaceae] 1274, Unclassified Oleiphilaceae 139262, Unclassified Desulfobacteraceae 251530, Balneola sp., Lactobacillus iners, Unclassified Bacteria 46553, Unclassified [Amoebophilaceae] 102524, Unclassified Phyllobacteriaceae 358715, Unclassified Bacteria 358716, Microbulbifer elongatus, Unclassified Flavobacteriaceae 358774, Unclassified Nitrospiraceae 9977, Unclassified Hyphomicrobiaceae 25362, Mycoplasma sp., Unclassified Lachnospiraceae 67609, Unclassified Hyphomicrobiaceae 106403, Unclassified Bacteria 155446, Unclassified Hyphomicrobiaceae 165088, Unclassified Alteromonadaceae 191057, Unclassified Rhodobacteraceae 220028, Unclassified Coxiellaceae 235007, Unclassified Colwelliaceae 358785, Unclassified Oleiphilaceae 358831, Unclassified Hyphomicrobiaceae 99435, Unclassified Bacteria 139823, Unclassified Oceanospirillaceae 181547, Unclassified Alteromonadaceae 209053, Unclassified Coxiellaceae 358916, Unclassified Coxiellaceae 358917, Unclassified Oleiphilaceae 358921, Unclassified Oleiphilaceae 358922, Unclassified Alteromonadaceae 358925


DNA analysis conducted by AquaBiomics LLC.